RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 SOS2Q07890 1332 aaPredicted RBP9.24□□□□□ -0.93
SPTLC3-201ENST00000399002 PSDA5PKW4 1024 aaPredicted RBP9.24□□□□□ -0.93
SPTLC3-201ENST00000399002 CARD6Q9BX69 1037 aa9.24□□□□□ -0.93
SPTLC3-201ENST00000399002 SAR1BQ9Y6B6 198 aa9.24□□□□□ -0.93
SPTLC3-201ENST00000399002 RNF40O75150 1001 aa9.24□□□□□ -0.93
SPTLC3-201ENST00000399002 TROVE2P10155 538 aaKnown RBP eCLIP9.24□□□□□ -0.93
SPTLC3-201ENST00000399002 ALDH1B1P30837 517 aa9.24□□□□□ -0.93
SPTLC3-201ENST00000399002 TAF12Q16514 161 aa9.24□□□□□ -0.93
SPTLC3-201ENST00000399002 TSC1Q92574 1164 aa9.24□□□□□ -0.93
SPTLC3-201ENST00000399002 MCUR1Q96AQ8 359 aa9.24□□□□□ -0.93
SPTLC3-201ENST00000399002 CALR3Q96L12 384 aaKnown RBP9.24□□□□□ -0.93
SPTLC3-201ENST00000399002 ZSCAN10Q96SZ4 725 aaPredicted RBP9.24□□□□□ -0.93
SPTLC3-201ENST00000399002 DBNDD2Q9BQY9 259 aa9.24□□□□□ -0.93
SPTLC3-201ENST00000399002 AZI2Q9H6S1 392 aa9.24□□□□□ -0.93
SPTLC3-201ENST00000399002 SAP30BPQ9UHR5 308 aaKnown RBP9.24□□□□□ -0.93
SPTLC3-201ENST00000399002 NSFL1CQ9UNZ2 370 aaKnown RBP9.24□□□□□ -0.93
SPTLC3-201ENST00000399002 A0A1W2PQ27 194 aa9.24□□□□□ -0.93
SPTLC3-201ENST00000399002 A0A1W2PQ64 194 aa9.24□□□□□ -0.93
SPTLC3-201ENST00000399002 A0A1W2PQD8 194 aa9.24□□□□□ -0.93
SPTLC3-201ENST00000399002 KCNJ18B7U540 433 aa9.24□□□□□ -0.93
SPTLC3-201ENST00000399002 PPP6R2O75170 966 aa9.24□□□□□ -0.93
SPTLC3-201ENST00000399002 TXKP42681 527 aa9.24□□□□□ -0.93
SPTLC3-201ENST00000399002 MORC3Q14149 939 aa9.24□□□□□ -0.93
SPTLC3-201ENST00000399002 KCNJ12Q14500 433 aa9.24□□□□□ -0.93
SPTLC3-201ENST00000399002 PAXIP1Q6ZW49 1069 aaPredicted RBP9.24□□□□□ -0.93
SPTLC3-201ENST00000399002 IFIH1Q9BYX4 1025 aaKnown RBP9.24□□□□□ -0.93
SPTLC3-201ENST00000399002 ZMYND15Q9H091 742 aa9.24□□□□□ -0.93
SPTLC3-201ENST00000399002 NFE2L3Q9Y4A8 694 aa9.24□□□□□ -0.93
SPTLC3-201ENST00000399002 DAPK3O43293 454 aa9.24□□□□□ -0.93
SPTLC3-201ENST00000399002 TRAPPC10P48553 1259 aa9.24□□□□□ -0.93
SPTLC3-201ENST00000399002 IRX3P78415 501 aaPredicted RBP9.24□□□□□ -0.93
SPTLC3-201ENST00000399002 CDC37L1Q7L3B6 337 aa9.24□□□□□ -0.93
SPTLC3-201ENST00000399002 MYCT1Q8N699 235 aa9.24□□□□□ -0.93
SPTLC3-201ENST00000399002 MRPL44Q9H9J2 332 aaKnown RBP9.24□□□□□ -0.93
SPTLC3-201ENST00000399002 ZNF532Q9HCE3 1301 aa9.24□□□□□ -0.93
SPTLC3-201ENST00000399002 PLEKHG3A1L390 1219 aa9.24□□□□□ -0.93
SPTLC3-201ENST00000399002 RXRAP19793 462 aa9.24□□□□□ -0.93
SPTLC3-201ENST00000399002 EIF4A1P60842 406 aaKnown RBP9.24□□□□□ -0.93
SPTLC3-201ENST00000399002 KRT26Q7Z3Y9 468 aa9.24□□□□□ -0.93
SPTLC3-201ENST00000399002 RPUSD2Q8IZ73 545 aaKnown RBP9.24□□□□□ -0.93
SPTLC3-201ENST00000399002 TRIM11Q96F44 468 aa9.24□□□□□ -0.93
SPTLC3-201ENST00000399002 HAUS7Q99871 368 aa9.24□□□□□ -0.93
SPTLC3-201ENST00000399002 ASIC3Q9UHC3 531 aa9.24□□□□□ -0.93
SPTLC3-201ENST00000399002 TNNQ9UQP3 1299 aa9.24□□□□□ -0.93
SPTLC3-201ENST00000399002 OAS2P29728 719 aaKnown RBP9.23□□□□□ -0.93
SPTLC3-201ENST00000399002 CTSWP56202 376 aa9.23□□□□□ -0.93
SPTLC3-201ENST00000399002 REXO1Q8N1G1 1221 aaKnown RBP9.23□□□□□ -0.93
SPTLC3-201ENST00000399002 SSH3Q8TE77 659 aa9.23□□□□□ -0.93
SPTLC3-201ENST00000399002 RAB20Q9NX57 234 aa9.23□□□□□ -0.93
SPTLC3-201ENST00000399002 ZBTB21Q9ULJ3 1066 aa9.23□□□□□ -0.93
SPTLC3-201ENST00000399002 CEP104O60308 925 aa9.23□□□□□ -0.93
SPTLC3-201ENST00000399002 ATF7P17544 494 aaPredicted RBP9.23□□□□□ -0.93
SPTLC3-201ENST00000399002 KCNA6P17658 529 aa9.23□□□□□ -0.93
SPTLC3-201ENST00000399002 TCP1P17987 556 aaKnown RBP9.23□□□□□ -0.93
SPTLC3-201ENST00000399002 PDZD4Q76G19 769 aaPredicted RBP9.23□□□□□ -0.93
SPTLC3-201ENST00000399002 MCF2L2Q86YR7 1114 aa9.23□□□□□ -0.93
SPTLC3-201ENST00000399002 NOSTRINQ8IVI9 506 aa9.23□□□□□ -0.93
SPTLC3-201ENST00000399002 FAM71BQ8TC56 605 aa9.23□□□□□ -0.93
SPTLC3-201ENST00000399002 TAB2Q9NYJ8 693 aa9.23□□□□□ -0.93
SPTLC3-201ENST00000399002 KIAA1468Q9P260 1216 aa9.23□□□□□ -0.93
SPTLC3-201ENST00000399002 FAN1Q9Y2M0 1017 aa9.23□□□□□ -0.93
SPTLC3-201ENST00000399002 NEURL1BA8MQ27 555 aa9.23□□□□□ -0.93
SPTLC3-201ENST00000399002 GIPC1O14908 333 aa9.23□□□□□ -0.93
SPTLC3-201ENST00000399002 GCNT3O95395 438 aa9.23□□□□□ -0.93
SPTLC3-201ENST00000399002 KRT9P35527 623 aa9.23□□□□□ -0.93
SPTLC3-201ENST00000399002 TMED8Q6PL24 325 aaPredicted RBP9.23□□□□□ -0.93
SPTLC3-201ENST00000399002 DPH6Q7L8W6 267 aa9.23□□□□□ -0.93
SPTLC3-201ENST00000399002 CCDC89Q8N998 374 aa9.23□□□□□ -0.93
SPTLC3-201ENST00000399002 CARD10Q9BWT7 1032 aa9.23□□□□□ -0.93
SPTLC3-201ENST00000399002 LSM14BQ9BX40 385 aaKnown RBP9.23□□□□□ -0.93
SPTLC3-201ENST00000399002 RABGAP1Q9Y3P9 1069 aa9.23□□□□□ -0.93
SPTLC3-201ENST00000399002 GNPATO15228 680 aa9.23□□□□□ -0.93
SPTLC3-201ENST00000399002 THAP12O43422 761 aa9.23□□□□□ -0.93
SPTLC3-201ENST00000399002 ELF2Q15723 593 aa9.23□□□□□ -0.93
SPTLC3-201ENST00000399002 LONRF2Q1L5Z9 754 aa9.23□□□□□ -0.93
SPTLC3-201ENST00000399002 G2E3Q7L622 706 aa9.23□□□□□ -0.93
SPTLC3-201ENST00000399002 MYOCDQ8IZQ8 938 aa9.23□□□□□ -0.93
SPTLC3-201ENST00000399002 RNF10Q8N5U6 811 aaKnown RBP9.23□□□□□ -0.93
SPTLC3-201ENST00000399002 CHURC1Q8WUH1 139 aa9.23□□□□□ -0.93
SPTLC3-201ENST00000399002 PLIN2Q99541 437 aa9.23□□□□□ -0.93
SPTLC3-201ENST00000399002 HAUS4Q9H6D7 363 aa9.23□□□□□ -0.93
SPTLC3-201ENST00000399002 EXOC3O60645 756 aa9.23□□□□□ -0.93
SPTLC3-201ENST00000399002 HPDP32754 393 aaPredicted RBP9.23□□□□□ -0.93
SPTLC3-201ENST00000399002 LMNB2Q03252 620 aa9.23□□□□□ -0.93
SPTLC3-201ENST00000399002 UAP1Q16222 522 aaPredicted RBP9.23□□□□□ -0.93
SPTLC3-201ENST00000399002 HADHQ16836 314 aaKnown RBP9.23□□□□□ -0.93
SPTLC3-201ENST00000399002 MYSM1Q5VVJ2 828 aa9.23□□□□□ -0.93
SPTLC3-201ENST00000399002 HVCN1Q96D96 273 aa9.23□□□□□ -0.93
SPTLC3-201ENST00000399002 FAM227BQ96M60 508 aa9.23□□□□□ -0.93
SPTLC3-201ENST00000399002 SPZ1Q9BXG8 430 aa9.23□□□□□ -0.93
SPTLC3-201ENST00000399002 TPCN1Q9ULQ1 816 aa9.23□□□□□ -0.93
SPTLC3-201ENST00000399002 SEC24BO95487 1268 aa9.22□□□□□ -0.93
SPTLC3-201ENST00000399002 PCK1P35558 622 aa9.22□□□□□ -0.93
SPTLC3-201ENST00000399002 CEP120Q8N960 986 aa9.22□□□□□ -0.93
SPTLC3-201ENST00000399002 OR8K1Q8NGG5 319 aa9.22□□□□□ -0.93
SPTLC3-201ENST00000399002 Q9H521 79 aa9.22□□□□□ -0.93
SPTLC3-201ENST00000399002 TFCP2L1Q9NZI6 479 aa9.22□□□□□ -0.93
SPTLC3-201ENST00000399002 PRPF6O94906 941 aaKnown RBP9.22□□□□□ -0.93
SPTLC3-201ENST00000399002 LUC7L3O95232 432 aaKnown RBP9.22□□□□□ -0.93
SPTLC3-201ENST00000399002 MYCNP04198 464 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms