RNA–Protein interactions for RNA: ENST00000398795.6

TNFSF11-203, Transcript of TNF superfamily member 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF11, Length 2,199 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11-203ENST00000398795 UBE4AQ14139 1066 aa22.29■■□□□ 1.16
TNFSF11-203ENST00000398795 E2F4Q16254 413 aa22.29■■□□□ 1.16
TNFSF11-203ENST00000398795 ARFGAP3Q9NP61 516 aa22.29■■□□□ 1.16
TNFSF11-203ENST00000398795 NIP7Q9Y221 180 aaKnown RBP eCLIP22.29■■□□□ 1.16
TNFSF11-203ENST00000398795 SEC31AO94979 1220 aaKnown RBP22.29■■□□□ 1.16
TNFSF11-203ENST00000398795 CYP2C19P33261 490 aa22.29■■□□□ 1.16
TNFSF11-203ENST00000398795 TUBB4BP68371 445 aa22.29■■□□□ 1.16
TNFSF11-203ENST00000398795 SPAG1Q07617 926 aa22.29■■□□□ 1.16
TNFSF11-203ENST00000398795 ZNF174Q15697 407 aa22.29■■□□□ 1.16
TNFSF11-203ENST00000398795 PARD6BQ9BYG5 372 aa22.29■■□□□ 1.16
TNFSF11-203ENST00000398795 LIMA1Q9UHB6 759 aaKnown RBP22.29■■□□□ 1.16
TNFSF11-203ENST00000398795 CNTNAP5Q8WYK1 1306 aa22.29■■□□□ 1.16
TNFSF11-203ENST00000398795 CICQ96RK0 1608 aaPredicted RBP22.28■■□□□ 1.16
TNFSF11-203ENST00000398795 WNT7AO00755 349 aa22.28■■□□□ 1.16
TNFSF11-203ENST00000398795 TTF2Q9UNY4 1162 aaKnown RBP22.28■■□□□ 1.16
TNFSF11-203ENST00000398795 XDHP47989 1333 aa22.28■■□□□ 1.16
TNFSF11-203ENST00000398795 COL1A1P02452 1464 aaPredicted RBP22.28■■□□□ 1.16
TNFSF11-203ENST00000398795 LAMB2P55268 1798 aa22.28■■□□□ 1.16
TNFSF11-203ENST00000398795 PTGDRQ13258 359 aa22.28■■□□□ 1.16
TNFSF11-203ENST00000398795 SRGAP1Q7Z6B7 1085 aa22.28■■□□□ 1.16
TNFSF11-203ENST00000398795 CEP112Q8N8E3 955 aa22.28■■□□□ 1.16
TNFSF11-203ENST00000398795 RWDD2AQ9UIY3 292 aa22.28■■□□□ 1.16
TNFSF11-203ENST00000398795 IQSEC3Q9UPP2 1182 aaPredicted RBP22.28■■□□□ 1.16
TNFSF11-203ENST00000398795 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.28■■□□□ 1.16
TNFSF11-203ENST00000398795 COL14A1Q05707 1796 aaKnown RBP22.28■■□□□ 1.16
TNFSF11-203ENST00000398795 CCDC151A5D8V7 595 aa22.27■■□□□ 1.16
TNFSF11-203ENST00000398795 SMIM22K7EJ46 135 aa22.27■■□□□ 1.16
TNFSF11-203ENST00000398795 ORC4O43929 436 aa22.27■■□□□ 1.16
TNFSF11-203ENST00000398795 GYPCP04921 128 aa22.27■■□□□ 1.16
TNFSF11-203ENST00000398795 CASP1P29466 404 aa22.27■■□□□ 1.16
TNFSF11-203ENST00000398795 BRD3Q15059 726 aa22.27■■□□□ 1.16
TNFSF11-203ENST00000398795 CTCFLQ8NI51 663 aaPredicted RBP22.27■■□□□ 1.16
TNFSF11-203ENST00000398795 EPC1Q9H2F5 836 aa22.27■■□□□ 1.16
TNFSF11-203ENST00000398795 CDC23Q9UJX2 597 aa22.27■■□□□ 1.16
TNFSF11-203ENST00000398795 hCG_1642624A0A1W2PR95 340 aa22.26■■□□□ 1.15
TNFSF11-203ENST00000398795 GTPBP6O43824 516 aaPredicted RBP22.26■■□□□ 1.15
TNFSF11-203ENST00000398795 SASH3O75995 380 aa22.26■■□□□ 1.15
TNFSF11-203ENST00000398795 CASP14P31944 242 aa22.26■■□□□ 1.15
TNFSF11-203ENST00000398795 GYG1P46976 350 aa22.26■■□□□ 1.15
TNFSF11-203ENST00000398795 TRIM14Q14142 442 aa22.26■■□□□ 1.15
TNFSF11-203ENST00000398795 CAVIN4Q5BKX8 364 aa22.26■■□□□ 1.15
TNFSF11-203ENST00000398795 PDXDC2PQ6P474 469 aa22.26■■□□□ 1.15
TNFSF11-203ENST00000398795 CTR9Q6PD62 1173 aa22.26■■□□□ 1.15
TNFSF11-203ENST00000398795 TMED8Q6PL24 325 aaPredicted RBP22.26■■□□□ 1.15
TNFSF11-203ENST00000398795 TMTC1Q8IUR5 882 aa22.26■■□□□ 1.15
TNFSF11-203ENST00000398795 SMYD4Q8IYR2 804 aaPredicted RBP22.26■■□□□ 1.15
TNFSF11-203ENST00000398795 LZTFL1Q9NQ48 299 aa22.26■■□□□ 1.15
TNFSF11-203ENST00000398795 CTNND2Q9UQB3 1225 aa22.26■■□□□ 1.15
TNFSF11-203ENST00000398795 RREB1Q92766 1687 aa22.26■■□□□ 1.15
TNFSF11-203ENST00000398795 POTEB2H3BUK9 544 aa22.26■■□□□ 1.15
TNFSF11-203ENST00000398795 CHMP4BP1P59074 171 aa22.26■■□□□ 1.15
TNFSF11-203ENST00000398795 PHLPP1O60346 1717 aa22.25■■□□□ 1.15
TNFSF11-203ENST00000398795 ATP6V1AP38606 617 aa22.25■■□□□ 1.15
TNFSF11-203ENST00000398795 DYNLL1P63167 89 aaKnown RBP22.25■■□□□ 1.15
TNFSF11-203ENST00000398795 ANKRD18AQ8IVF6 992 aa22.25■■□□□ 1.15
TNFSF11-203ENST00000398795 CPLX3Q8WVH0 158 aa22.25■■□□□ 1.15
TNFSF11-203ENST00000398795 IRX2Q9BZI1 471 aaPredicted RBP22.25■■□□□ 1.15
TNFSF11-203ENST00000398795 RMND1Q9NWS8 449 aa22.25■■□□□ 1.15
TNFSF11-203ENST00000398795 CACNA1SQ13698 1873 aa22.25■■□□□ 1.15
TNFSF11-203ENST00000398795 CYP2D7A0A087X1C5 515 aa22.25■■□□□ 1.15
TNFSF11-203ENST00000398795 SCG2P13521 617 aa22.25■■□□□ 1.15
TNFSF11-203ENST00000398795 KRT31Q15323 416 aa22.25■■□□□ 1.15
TNFSF11-203ENST00000398795 SRBD1Q8N5C6 995 aaKnown RBP22.25■■□□□ 1.15
TNFSF11-203ENST00000398795 ANKRD20A12PQ8NF67 263 aa22.25■■□□□ 1.15
TNFSF11-203ENST00000398795 BSDC1Q9NW68 430 aaPredicted RBP22.25■■□□□ 1.15
TNFSF11-203ENST00000398795 ZNF652Q9Y2D9 606 aa22.25■■□□□ 1.15
TNFSF11-203ENST00000398795 ZNF335Q9H4Z2 1342 aaPredicted RBP22.24■■□□□ 1.15
TNFSF11-203ENST00000398795 FXR1P51114 621 aaKnown RBP eCLIP22.24■■□□□ 1.15
TNFSF11-203ENST00000398795 PAK1Q13153 545 aa22.24■■□□□ 1.15
TNFSF11-203ENST00000398795 NOM1Q5C9Z4 860 aaKnown RBP22.24■■□□□ 1.15
TNFSF11-203ENST00000398795 ARL6IP4Q66PJ3 421 aaKnown RBP22.24■■□□□ 1.15
TNFSF11-203ENST00000398795 HNRNPLLQ8WVV9 542 aaKnown RBP22.24■■□□□ 1.15
TNFSF11-203ENST00000398795 CDCA7Q9BWT1 371 aaPredicted RBP22.24■■□□□ 1.15
TNFSF11-203ENST00000398795 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.24■■□□□ 1.15
TNFSF11-203ENST00000398795 MYO1AQ9UBC5 1043 aa22.24■■□□□ 1.15
TNFSF11-203ENST00000398795 SF3B3Q15393 1217 aaKnown RBP22.23■■□□□ 1.15
TNFSF11-203ENST00000398795 PFKFB3Q16875 520 aaPredicted RBP22.23■■□□□ 1.15
TNFSF11-203ENST00000398795 FUT8Q9BYC5 575 aa22.23■■□□□ 1.15
TNFSF11-203ENST00000398795 PDS5AQ29RF7 1337 aaKnown RBP22.23■■□□□ 1.15
TNFSF11-203ENST00000398795 LOC102724428A0A0B4J2F2 783 aa22.23■■□□□ 1.15
TNFSF11-203ENST00000398795 USP17L12C9JPN9 530 aa22.23■■□□□ 1.15
TNFSF11-203ENST00000398795 USP17L21D6R901 530 aa22.23■■□□□ 1.15
TNFSF11-203ENST00000398795 N4BP3O15049 544 aa22.23■■□□□ 1.15
TNFSF11-203ENST00000398795 SIK1P57059 783 aa22.23■■□□□ 1.15
TNFSF11-203ENST00000398795 NLRP5P59047 1200 aa22.23■■□□□ 1.15
TNFSF11-203ENST00000398795 SMC1AQ14683 1233 aaKnown RBP22.23■■□□□ 1.15
TNFSF11-203ENST00000398795 ZNF658Q5TYW1 1059 aaPredicted RBP22.23■■□□□ 1.15
TNFSF11-203ENST00000398795 RRAGBQ5VZM2 374 aa22.23■■□□□ 1.15
TNFSF11-203ENST00000398795 ZNF384Q8TF68 577 aa22.23■■□□□ 1.15
TNFSF11-203ENST00000398795 ABHD10Q9NUJ1 306 aa22.23■■□□□ 1.15
TNFSF11-203ENST00000398795 DLEC1Q9Y238 1755 aa22.22■■□□□ 1.15
TNFSF11-203ENST00000398795 CTAGE9A4FU28 777 aa22.22■■□□□ 1.15
TNFSF11-203ENST00000398795 LONP1P36776 959 aaKnown RBP22.22■■□□□ 1.15
TNFSF11-203ENST00000398795 COPB1P53618 953 aaKnown RBP22.22■■□□□ 1.15
TNFSF11-203ENST00000398795 PIK3AP1Q6ZUJ8 805 aa22.22■■□□□ 1.15
TNFSF11-203ENST00000398795 DOT1LQ8TEK3 1739 aa22.22■■□□□ 1.15
TNFSF11-203ENST00000398795 ZNF569Q5MCW4 686 aa22.22■■□□□ 1.15
TNFSF11-203ENST00000398795 CYP26C1Q6V0L0 522 aa22.22■■□□□ 1.15
TNFSF11-203ENST00000398795 MSANTD4Q8NCY6 345 aa22.22■■□□□ 1.15
TNFSF11-203ENST00000398795 MTRQ99707 1265 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms