RNA–Protein interactions for RNA: ENST00000398792.3

CDH23-204, Transcript of cadherin related 23, humanhuman

TSL 2

Gene CDH23, Length 1,649 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-204ENST00000398792 FAM184AQ8NB25 1140 aa19.4■□□□□ 0.7
CDH23-204ENST00000398792 MKL1Q969V6 931 aa19.4■□□□□ 0.7
CDH23-204ENST00000398792 KIF3AQ9Y496 699 aa19.4■□□□□ 0.7
CDH23-204ENST00000398792 FDPSP14324 419 aaKnown RBP19.4■□□□□ 0.7
CDH23-204ENST00000398792 PHKBQ93100 1093 aa19.4■□□□□ 0.7
CDH23-204ENST00000398792 GINM1Q9NU53 330 aa19.4■□□□□ 0.7
CDH23-204ENST00000398792 ORC3Q9UBD5 711 aaPredicted RBP19.4■□□□□ 0.7
CDH23-204ENST00000398792 MAD2L2Q9UI95 211 aa19.4■□□□□ 0.7
CDH23-204ENST00000398792 ZNF112Q9UJU3 913 aa19.4■□□□□ 0.7
CDH23-204ENST00000398792 MTMR7Q9Y216 660 aa19.4■□□□□ 0.7
CDH23-204ENST00000398792 CNTNAP5Q8WYK1 1306 aa19.39■□□□□ 0.69
CDH23-204ENST00000398792 CTNND1O60716 968 aaKnown RBP19.39■□□□□ 0.69
CDH23-204ENST00000398792 FMNL1O95466 1100 aaPredicted RBP19.39■□□□□ 0.69
CDH23-204ENST00000398792 SNHG28P0DPA3 235 aa19.39■□□□□ 0.69
CDH23-204ENST00000398792 PDHBP11177 359 aa19.39■□□□□ 0.69
CDH23-204ENST00000398792 PDCP20941 246 aa19.39■□□□□ 0.69
CDH23-204ENST00000398792 SYT1P21579 422 aa19.39■□□□□ 0.69
CDH23-204ENST00000398792 FUT2Q10981 343 aa19.39■□□□□ 0.69
CDH23-204ENST00000398792 NBPF11Q86T75 865 aa19.39■□□□□ 0.69
CDH23-204ENST00000398792 CMTR1Q8N1G2 835 aaKnown RBP19.39■□□□□ 0.69
CDH23-204ENST00000398792 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.39■□□□□ 0.69
CDH23-204ENST00000398792 SYNPO2Q9UMS6 1093 aa19.39■□□□□ 0.69
CDH23-204ENST00000398792 INPP5BP32019 993 aa19.38■□□□□ 0.69
CDH23-204ENST00000398792 DLK2Q6UY11 383 aa19.38■□□□□ 0.69
CDH23-204ENST00000398792 STAG2Q8N3U4 1231 aa19.38■□□□□ 0.69
CDH23-204ENST00000398792 WRNIP1Q96S55 665 aa19.38■□□□□ 0.69
CDH23-204ENST00000398792 SLC26A6Q9BXS9 759 aa19.38■□□□□ 0.69
CDH23-204ENST00000398792 ARHGEF10LQ9HCE6 1279 aa19.38■□□□□ 0.69
CDH23-204ENST00000398792 OTOFQ9HC10 1997 aa19.38■□□□□ 0.69
CDH23-204ENST00000398792 PALM3A6NDB9 673 aaPredicted RBP19.37■□□□□ 0.69
CDH23-204ENST00000398792 USP17L5A8MUK1 530 aa19.37■□□□□ 0.69
CDH23-204ENST00000398792 STX6O43752 255 aa19.37■□□□□ 0.69
CDH23-204ENST00000398792 BRD1O95696 1058 aa19.37■□□□□ 0.69
CDH23-204ENST00000398792 PARP1P09874 1014 aaKnown RBP19.37■□□□□ 0.69
CDH23-204ENST00000398792 POTEIP0CG38 1075 aa19.37■□□□□ 0.69
CDH23-204ENST00000398792 POTEJP0CG39 1038 aa19.37■□□□□ 0.69
CDH23-204ENST00000398792 VEGFAP15692 232 aaPredicted RBP19.37■□□□□ 0.69
CDH23-204ENST00000398792 GNAQP50148 359 aa19.37■□□□□ 0.69
CDH23-204ENST00000398792 SSRP1Q08945 709 aaKnown RBP19.37■□□□□ 0.69
CDH23-204ENST00000398792 LARP1BQ659C4 914 aaKnown RBP19.37■□□□□ 0.69
CDH23-204ENST00000398792 USP48Q86UV5 1035 aa19.37■□□□□ 0.69
CDH23-204ENST00000398792 TRIM22Q8IYM9 498 aa19.37■□□□□ 0.69
CDH23-204ENST00000398792 CDCA5Q96FF9 252 aa19.37■□□□□ 0.69
CDH23-204ENST00000398792 RNF26Q9BY78 433 aaPredicted RBP19.37■□□□□ 0.69
CDH23-204ENST00000398792 FZD1Q9UP38 647 aa19.37■□□□□ 0.69
CDH23-204ENST00000398792 ZDHHC9Q9Y397 364 aa19.37■□□□□ 0.69
CDH23-204ENST00000398792 A0A1W2PRG0 241 aa19.36■□□□□ 0.69
CDH23-204ENST00000398792 ASPRV1Q53RT3 343 aa19.36■□□□□ 0.69
CDH23-204ENST00000398792 USP17L2Q6R6M4 530 aa19.36■□□□□ 0.69
CDH23-204ENST00000398792 SCYL3Q8IZE3 742 aa19.36■□□□□ 0.69
CDH23-204ENST00000398792 SRBD1Q8N5C6 995 aaKnown RBP19.36■□□□□ 0.69
CDH23-204ENST00000398792 GMCL1P1Q8NEA9 526 aa19.36■□□□□ 0.69
CDH23-204ENST00000398792 KLRG1Q96E93 195 aa19.36■□□□□ 0.69
CDH23-204ENST00000398792 GLIS2Q9BZE0 524 aaPredicted RBP19.36■□□□□ 0.69
CDH23-204ENST00000398792 RRAGCQ9HB90 399 aa19.36■□□□□ 0.69
CDH23-204ENST00000398792 WDR33Q9C0J8 1336 aaKnown RBP19.36■□□□□ 0.69
CDH23-204ENST00000398792 GOLGA8HP0CJ92 632 aa19.36■□□□□ 0.69
CDH23-204ENST00000398792 PDIA4P13667 645 aaKnown RBP19.36■□□□□ 0.69
CDH23-204ENST00000398792 CDC37L1Q7L3B6 337 aa19.36■□□□□ 0.69
CDH23-204ENST00000398792 CCDC82Q8N4S0 544 aa19.36■□□□□ 0.69
CDH23-204ENST00000398792 DEXIO95424 95 aa19.35■□□□□ 0.69
CDH23-204ENST00000398792 ECE1P42892 770 aa19.35■□□□□ 0.69
CDH23-204ENST00000398792 ZNF543Q08ER8 600 aa19.35■□□□□ 0.69
CDH23-204ENST00000398792 CCDC84Q86UT8 332 aaPredicted RBP19.35■□□□□ 0.69
CDH23-204ENST00000398792 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.35■□□□□ 0.69
CDH23-204ENST00000398792 ACER1Q8TDN7 264 aa19.35■□□□□ 0.69
CDH23-204ENST00000398792 LZTS2Q9BRK4 669 aa19.35■□□□□ 0.69
CDH23-204ENST00000398792 MTMR6Q9Y217 621 aa19.35■□□□□ 0.69
CDH23-204ENST00000398792 CLEC11AQ9Y240 323 aa19.35■□□□□ 0.69
CDH23-204ENST00000398792 TMX2Q9Y320 296 aa19.35■□□□□ 0.69
CDH23-204ENST00000398792 FRMPD2Q68DX3 1309 aaPredicted RBP19.34■□□□□ 0.69
CDH23-204ENST00000398792 MYH6P13533 1939 aa19.34■□□□□ 0.69
CDH23-204ENST00000398792 VPS37CA5D8V6 355 aaPredicted RBP19.34■□□□□ 0.69
CDH23-204ENST00000398792 UBE2Q2LH0YL09 131 aa19.34■□□□□ 0.69
CDH23-204ENST00000398792 NOL9Q5SY16 702 aaKnown RBP19.34■□□□□ 0.69
CDH23-204ENST00000398792 SLFN13Q68D06 897 aa19.34■□□□□ 0.69
CDH23-204ENST00000398792 DCAF4Q8WV16 495 aa19.34■□□□□ 0.69
CDH23-204ENST00000398792 SH2D4AQ9H788 454 aa19.34■□□□□ 0.69
CDH23-204ENST00000398792 NMRK2Q9NPI5 230 aa19.34■□□□□ 0.69
CDH23-204ENST00000398792 KLRF2D3W0D1 207 aa19.33■□□□□ 0.69
CDH23-204ENST00000398792 F5H6K3 240 aa19.33■□□□□ 0.69
CDH23-204ENST00000398792 PRPF3O43395 683 aaKnown RBP19.33■□□□□ 0.69
CDH23-204ENST00000398792 USP2O75604 605 aaPredicted RBP19.33■□□□□ 0.69
CDH23-204ENST00000398792 NDUFB10O96000 172 aa19.33■□□□□ 0.69
CDH23-204ENST00000398792 ZSCAN22P10073 491 aaPredicted RBP19.33■□□□□ 0.69
CDH23-204ENST00000398792 NF2P35240 595 aa19.33■□□□□ 0.69
CDH23-204ENST00000398792 FOSBP53539 338 aa19.33■□□□□ 0.69
CDH23-204ENST00000398792 KLRC3Q07444 240 aa19.33■□□□□ 0.69
CDH23-204ENST00000398792 CCDC96Q2M329 555 aa19.33■□□□□ 0.69
CDH23-204ENST00000398792 SLC35G1Q2M3R5 365 aa19.33■□□□□ 0.69
CDH23-204ENST00000398792 GPATCH4Q5T3I0 446 aaKnown RBP19.33■□□□□ 0.69
CDH23-204ENST00000398792 WASF1Q92558 559 aa19.33■□□□□ 0.69
CDH23-204ENST00000398792 ZKSCAN4Q969J2 545 aaPredicted RBP19.33■□□□□ 0.69
CDH23-204ENST00000398792 GMCL1Q96IK5 515 aa19.33■□□□□ 0.69
CDH23-204ENST00000398792 AIFM3Q96NN9 605 aa19.33■□□□□ 0.69
CDH23-204ENST00000398792 ALG1Q9BT22 464 aa19.33■□□□□ 0.69
CDH23-204ENST00000398792 SPZ1Q9BXG8 430 aa19.33■□□□□ 0.69
CDH23-204ENST00000398792 RAD21O60216 631 aa19.33■□□□□ 0.68
CDH23-204ENST00000398792 AKAP17AQ02040 695 aaKnown RBP19.33■□□□□ 0.68
CDH23-204ENST00000398792 PRKG1Q13976 671 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms