RNA–Protein interactions for RNA: ENST00000398676.3

CCAR1-202, Transcript of cell division cycle and apoptosis regulator 1, humanhuman

TSL 3

Gene CCAR1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCAR1-202ENST00000398676 DCTN4Q9UJW0 460 aa11.31□□□□□ -0.6
CCAR1-202ENST00000398676 TTC21AQ8NDW8 1320 aa11.31□□□□□ -0.6
CCAR1-202ENST00000398676 USP31Q70CQ4 1352 aa11.3□□□□□ -0.6
CCAR1-202ENST00000398676 C9orf172C9J069 976 aa11.3□□□□□ -0.6
CCAR1-202ENST00000398676 PDE2AO00408 941 aaPredicted RBP11.3□□□□□ -0.6
CCAR1-202ENST00000398676 FBXO46Q6PJ61 603 aaPredicted RBP11.3□□□□□ -0.6
CCAR1-202ENST00000398676 DMRTB1Q96MA1 342 aa11.3□□□□□ -0.6
CCAR1-202ENST00000398676 SRA1Q9HD15 236 aaKnown RBP11.3□□□□□ -0.6
CCAR1-202ENST00000398676 CGNL1Q0VF96 1302 aa11.3□□□□□ -0.6
CCAR1-202ENST00000398676 CEP290O15078 2479 aa11.29□□□□□ -0.6
CCAR1-202ENST00000398676 SCN11AQ9UI33 1791 aa11.29□□□□□ -0.6
CCAR1-202ENST00000398676 TRPA1O75762 1119 aa11.29□□□□□ -0.6
CCAR1-202ENST00000398676 MAP4K3Q8IVH8 894 aa11.29□□□□□ -0.6
CCAR1-202ENST00000398676 DCAF11Q8TEB1 546 aa11.29□□□□□ -0.6
CCAR1-202ENST00000398676 RNF186Q9NXI6 227 aa11.29□□□□□ -0.6
CCAR1-202ENST00000398676 TTC21BQ7Z4L5 1316 aa11.29□□□□□ -0.6
CCAR1-202ENST00000398676 RANBP2P49792 3224 aaKnown RBP11.28□□□□□ -0.6
CCAR1-202ENST00000398676 POLRMTO00411 1230 aaKnown RBP11.28□□□□□ -0.6
CCAR1-202ENST00000398676 DEAF1O75398 565 aaPredicted RBP11.28□□□□□ -0.6
CCAR1-202ENST00000398676 POLR3DP05423 398 aaPredicted RBP11.28□□□□□ -0.6
CCAR1-202ENST00000398676 MAPK1P28482 360 aa11.28□□□□□ -0.6
CCAR1-202ENST00000398676 INTS3Q68E01 1043 aaKnown RBP11.28□□□□□ -0.6
CCAR1-202ENST00000398676 AEBP1Q8IUX7 1158 aa11.28□□□□□ -0.6
CCAR1-202ENST00000398676 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.28□□□□□ -0.6
CCAR1-202ENST00000398676 TMEM102Q8N9M5 508 aaPredicted RBP11.28□□□□□ -0.6
CCAR1-202ENST00000398676 ZKSCAN3Q9BRR0 538 aa11.28□□□□□ -0.6
CCAR1-202ENST00000398676 NIF3L1Q9GZT8 377 aa11.28□□□□□ -0.6
CCAR1-202ENST00000398676 RNF123Q5XPI4 1314 aa11.28□□□□□ -0.6
CCAR1-202ENST00000398676 H0YGN5 161 aa11.27□□□□□ -0.61
CCAR1-202ENST00000398676 LINC01387J3KSC0 135 aa11.27□□□□□ -0.61
CCAR1-202ENST00000398676 TRAF5O00463 557 aa11.27□□□□□ -0.61
CCAR1-202ENST00000398676 GPR182O15218 404 aa11.27□□□□□ -0.61
CCAR1-202ENST00000398676 CPNE3O75131 537 aaKnown RBP11.27□□□□□ -0.61
CCAR1-202ENST00000398676 PROCP04070 461 aa11.27□□□□□ -0.61
CCAR1-202ENST00000398676 SELPP16109 830 aa11.27□□□□□ -0.61
CCAR1-202ENST00000398676 GATA4P43694 442 aa11.27□□□□□ -0.61
CCAR1-202ENST00000398676 CABP4P57796 275 aa11.27□□□□□ -0.61
CCAR1-202ENST00000398676 NRG1Q02297 640 aaPredicted RBP11.27□□□□□ -0.61
CCAR1-202ENST00000398676 FAM117BQ6P1L5 589 aa11.27□□□□□ -0.61
CCAR1-202ENST00000398676 SHISA2Q6UWI4 295 aa11.27□□□□□ -0.61
CCAR1-202ENST00000398676 LENG1Q96BZ8 264 aaPredicted RBP11.27□□□□□ -0.61
CCAR1-202ENST00000398676 ADAM19Q9H013 955 aa11.27□□□□□ -0.61
CCAR1-202ENST00000398676 SH2B1Q9NRF2 756 aaPredicted RBP11.27□□□□□ -0.61
CCAR1-202ENST00000398676 HDAC9Q9UKV0 1011 aa11.27□□□□□ -0.61
CCAR1-202ENST00000398676 STXBP5LQ9Y2K9 1186 aa11.27□□□□□ -0.61
CCAR1-202ENST00000398676 PAPPA2Q9BXP8 1791 aa11.26□□□□□ -0.61
CCAR1-202ENST00000398676 CELF2O95319 508 aaKnown RBP11.26□□□□□ -0.61
CCAR1-202ENST00000398676 CDC25BP30305 580 aa11.26□□□□□ -0.61
CCAR1-202ENST00000398676 ORC1Q13415 861 aa11.26□□□□□ -0.61
CCAR1-202ENST00000398676 GALNT12Q8IXK2 581 aa11.26□□□□□ -0.61
CCAR1-202ENST00000398676 PIGBQ92521 554 aa11.26□□□□□ -0.61
CCAR1-202ENST00000398676 HHIPQ96QV1 700 aa11.26□□□□□ -0.61
CCAR1-202ENST00000398676 PCDH11XQ9BZA7 1347 aa11.26□□□□□ -0.61
CCAR1-202ENST00000398676 PCDH11YQ9BZA8 1340 aa11.26□□□□□ -0.61
CCAR1-202ENST00000398676 ZNF541Q9H0D2 1346 aa11.26□□□□□ -0.61
CCAR1-202ENST00000398676 ZNF831Q5JPB2 1677 aa11.26□□□□□ -0.61
CCAR1-202ENST00000398676 NRXN2Q9P2S2 1712 aa11.26□□□□□ -0.61
CCAR1-202ENST00000398676 CD163L1Q9NR16 1453 aa11.25□□□□□ -0.61
CCAR1-202ENST00000398676 H0YIN7 160 aa11.25□□□□□ -0.61
CCAR1-202ENST00000398676 RPS6KA4O75676 772 aa11.25□□□□□ -0.61
CCAR1-202ENST00000398676 SETDB1Q15047 1291 aa11.25□□□□□ -0.61
CCAR1-202ENST00000398676 IGF2-ASQ6U949 168 aa11.25□□□□□ -0.61
CCAR1-202ENST00000398676 ADAMTSL4Q6UY14 1074 aa11.25□□□□□ -0.61
CCAR1-202ENST00000398676 TMC7Q7Z402 723 aa11.25□□□□□ -0.61
CCAR1-202ENST00000398676 NXPE3Q969Y0 559 aa11.25□□□□□ -0.61
CCAR1-202ENST00000398676 LATS2Q9NRM7 1088 aa11.25□□□□□ -0.61
CCAR1-202ENST00000398676 MAP3K19Q56UN5 1328 aa11.25□□□□□ -0.61
CCAR1-202ENST00000398676 CNTNAP4Q9C0A0 1308 aa11.25□□□□□ -0.61
CCAR1-202ENST00000398676 LAMB4A4D0S4 1761 aa11.25□□□□□ -0.61
CCAR1-202ENST00000398676 VCANP13611 3396 aa11.24□□□□□ -0.61
CCAR1-202ENST00000398676 AFDNP55196 1824 aaKnown RBP11.24□□□□□ -0.61
CCAR1-202ENST00000398676 IGHA2P01877 340 aa11.24□□□□□ -0.61
CCAR1-202ENST00000398676 EPHA1P21709 976 aa11.24□□□□□ -0.61
CCAR1-202ENST00000398676 PEAR1Q5VY43 1037 aaPredicted RBP11.24□□□□□ -0.61
CCAR1-202ENST00000398676 USPL1Q5W0Q7 1092 aa11.24□□□□□ -0.61
CCAR1-202ENST00000398676 TXNDC11Q6PKC3 985 aa11.24□□□□□ -0.61
CCAR1-202ENST00000398676 C2CD5Q86YS7 1000 aa11.24□□□□□ -0.61
CCAR1-202ENST00000398676 DNAJC25Q9H1X3 360 aa11.24□□□□□ -0.61
CCAR1-202ENST00000398676 USP42Q9H9J4 1324 aaKnown RBP11.24□□□□□ -0.61
CCAR1-202ENST00000398676 COL5A3P25940 1745 aaPredicted RBP11.23□□□□□ -0.61
CCAR1-202ENST00000398676 SPTBN5Q9NRC6 3674 aaKnown RBP11.23□□□□□ -0.61
CCAR1-202ENST00000398676 TM4SF1P30408 202 aa11.23□□□□□ -0.61
CCAR1-202ENST00000398676 SOGA3Q5TF21 947 aa11.23□□□□□ -0.61
CCAR1-202ENST00000398676 GPC2Q8N158 579 aa11.23□□□□□ -0.61
CCAR1-202ENST00000398676 ALKBH8Q96BT7 664 aaKnown RBP11.23□□□□□ -0.61
CCAR1-202ENST00000398676 A0A1W2PPC1 479 aa11.22□□□□□ -0.61
CCAR1-202ENST00000398676 EIF1AYO14602 144 aaKnown RBP11.22□□□□□ -0.61
CCAR1-202ENST00000398676 ADGRE1Q14246 886 aa11.22□□□□□ -0.61
CCAR1-202ENST00000398676 ASAP3Q8TDY4 903 aa11.22□□□□□ -0.61
CCAR1-202ENST00000398676 BSNDQ8WZ55 320 aa11.22□□□□□ -0.61
CCAR1-202ENST00000398676 KDRP35968 1356 aa11.21□□□□□ -0.61
CCAR1-202ENST00000398676 FAM155AB1AL88 458 aaPredicted RBP11.21□□□□□ -0.61
CCAR1-202ENST00000398676 H3BRJ5 948 aa11.21□□□□□ -0.61
CCAR1-202ENST00000398676 FSCN2O14926 492 aa11.21□□□□□ -0.61
CCAR1-202ENST00000398676 MBTPS1Q14703 1052 aa11.21□□□□□ -0.61
CCAR1-202ENST00000398676 USP50Q70EL3 339 aaPredicted RBP11.21□□□□□ -0.61
CCAR1-202ENST00000398676 ZSCAN29Q8IWY8 852 aaPredicted RBP11.21□□□□□ -0.61
CCAR1-202ENST00000398676 CSRNP1Q96S65 589 aa11.21□□□□□ -0.61
CCAR1-202ENST00000398676 BHLHE41Q9C0J9 482 aaPredicted RBP11.21□□□□□ -0.61
CCAR1-202ENST00000398676 PRO3102Q9H379 93 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms