RNA–Protein interactions for RNA: ENST00000398527.6

MSL3-207, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-207ENST00000398527 USP16Q9Y5T5 823 aa12.22□□□□□ -0.45
MSL3-207ENST00000398527 TMEM110-MUSTN1A8MSY1 372 aa12.21□□□□□ -0.45
MSL3-207ENST00000398527 MYL6BP14649 208 aa12.21□□□□□ -0.45
MSL3-207ENST00000398527 CD53P19397 219 aa12.21□□□□□ -0.45
MSL3-207ENST00000398527 PDCP20941 246 aa12.21□□□□□ -0.45
MSL3-207ENST00000398527 PTH1RQ03431 593 aa12.21□□□□□ -0.45
MSL3-207ENST00000398527 ICA1Q05084 483 aa12.21□□□□□ -0.45
MSL3-207ENST00000398527 PDAP1Q13442 181 aaKnown RBP12.21□□□□□ -0.45
MSL3-207ENST00000398527 KRT32Q14532 448 aa12.21□□□□□ -0.45
MSL3-207ENST00000398527 SKIV2LQ15477 1246 aaKnown RBP12.21□□□□□ -0.45
MSL3-207ENST00000398527 CREB3L3Q68CJ9 461 aa12.21□□□□□ -0.45
MSL3-207ENST00000398527 TTLL5Q6EMB2 1281 aa12.21□□□□□ -0.45
MSL3-207ENST00000398527 KANK3Q6NY19 840 aa12.21□□□□□ -0.45
MSL3-207ENST00000398527 PRIMPOLQ96LW4 560 aa12.21□□□□□ -0.45
MSL3-207ENST00000398527 TRIM6Q9C030 488 aaPredicted RBP12.21□□□□□ -0.45
MSL3-207ENST00000398527 NFKBIEO00221 500 aa12.21□□□□□ -0.46
MSL3-207ENST00000398527 CYP11B2P19099 503 aa12.21□□□□□ -0.46
MSL3-207ENST00000398527 PPP4R3CPQ6ZMV5 832 aa12.21□□□□□ -0.46
MSL3-207ENST00000398527 CCAR1Q8IX12 1150 aaKnown RBP12.21□□□□□ -0.46
MSL3-207ENST00000398527 KCNN1Q92952 543 aa12.21□□□□□ -0.46
MSL3-207ENST00000398527 DHX36Q9H2U1 1008 aaKnown RBP12.21□□□□□ -0.46
MSL3-207ENST00000398527 BARX2Q9UMQ3 279 aaPredicted RBP12.21□□□□□ -0.46
MSL3-207ENST00000398527 RBM8AQ9Y5S9 174 aaKnown RBP12.21□□□□□ -0.46
MSL3-207ENST00000398527 ELP1O95163 1332 aa12.21□□□□□ -0.46
MSL3-207ENST00000398527 PDE4DIPQ5VU43 2346 aa12.2□□□□□ -0.46
MSL3-207ENST00000398527 RASSF10A6NK89 507 aa12.2□□□□□ -0.46
MSL3-207ENST00000398527 RFX5P48382 616 aaPredicted RBP12.2□□□□□ -0.46
MSL3-207ENST00000398527 TMED1Q13445 227 aa12.2□□□□□ -0.46
MSL3-207ENST00000398527 COBLL1Q53SF7 1204 aa12.2□□□□□ -0.46
MSL3-207ENST00000398527 MIEF2Q96C03 454 aa12.2□□□□□ -0.46
MSL3-207ENST00000398527 JAKMIP1Q96N16 626 aaKnown RBP12.2□□□□□ -0.46
MSL3-207ENST00000398527 SLC4A9Q96Q91 983 aa12.2□□□□□ -0.46
MSL3-207ENST00000398527 PA2G4Q9UQ80 394 aaKnown RBP12.2□□□□□ -0.46
MSL3-207ENST00000398527 MTMR6Q9Y217 621 aa12.2□□□□□ -0.46
MSL3-207ENST00000398527 ZKSCAN5Q9Y2L8 839 aa12.2□□□□□ -0.46
MSL3-207ENST00000398527 GJA3Q9Y6H8 435 aa12.2□□□□□ -0.46
MSL3-207ENST00000398527 DICER1Q9UPY3 1922 aaKnown RBP12.2□□□□□ -0.46
MSL3-207ENST00000398527 THSD7BQ9C0I4 1608 aa12.2□□□□□ -0.46
MSL3-207ENST00000398527 C21orf2O43822 256 aa12.2□□□□□ -0.46
MSL3-207ENST00000398527 PRPF40BQ6NWY9 871 aaKnown RBP12.2□□□□□ -0.46
MSL3-207ENST00000398527 CCDC174Q6PII3 467 aa12.2□□□□□ -0.46
MSL3-207ENST00000398527 LEKR1Q6ZMV7 388 aa12.2□□□□□ -0.46
MSL3-207ENST00000398527 LDHDQ86WU2 507 aa12.2□□□□□ -0.46
MSL3-207ENST00000398527 SLC43A3Q8NBI5 491 aa12.2□□□□□ -0.46
MSL3-207ENST00000398527 MYD88Q99836 296 aa12.2□□□□□ -0.46
MSL3-207ENST00000398527 TMEM165Q9HC07 324 aa12.2□□□□□ -0.46
MSL3-207ENST00000398527 GPR108Q9NPR9 543 aa12.2□□□□□ -0.46
MSL3-207ENST00000398527 IKBKGQ9Y6K9 419 aa12.2□□□□□ -0.46
MSL3-207ENST00000398527 POLRMTO00411 1230 aaKnown RBP12.19□□□□□ -0.46
MSL3-207ENST00000398527 SNUPNO95149 360 aaKnown RBP12.19□□□□□ -0.46
MSL3-207ENST00000398527 MYL1P05976 194 aa12.19□□□□□ -0.46
MSL3-207ENST00000398527 NMIQ13287 307 aaPredicted RBP12.19□□□□□ -0.46
MSL3-207ENST00000398527 TTC39BQ5VTQ0 682 aaPredicted RBP12.19□□□□□ -0.46
MSL3-207ENST00000398527 RELL1Q8IUW5 271 aa12.19□□□□□ -0.46
MSL3-207ENST00000398527 KIAA1958Q8N8K9 716 aa12.19□□□□□ -0.46
MSL3-207ENST00000398527 RNF214Q8ND24 703 aa12.19□□□□□ -0.46
MSL3-207ENST00000398527 PLBD2Q8NHP8 589 aa12.19□□□□□ -0.46
MSL3-207ENST00000398527 ZNF483Q8TF39 744 aaPredicted RBP12.19□□□□□ -0.46
MSL3-207ENST00000398527 BAG1Q99933 345 aaPredicted RBP12.19□□□□□ -0.46
MSL3-207ENST00000398527 SPATS2LQ9NUQ6 558 aaKnown RBP12.19□□□□□ -0.46
MSL3-207ENST00000398527 SRP68Q9UHB9 627 aaKnown RBP12.19□□□□□ -0.46
MSL3-207ENST00000398527 ZNF652Q9Y2D9 606 aa12.19□□□□□ -0.46
MSL3-207ENST00000398527 AP1G2O75843 785 aa12.19□□□□□ -0.46
MSL3-207ENST00000398527 CCDC159P0C7I6 412 aa12.19□□□□□ -0.46
MSL3-207ENST00000398527 ZNF131P52739 623 aa12.19□□□□□ -0.46
MSL3-207ENST00000398527 KIF4BQ2VIQ3 1234 aa12.19□□□□□ -0.46
MSL3-207ENST00000398527 SAMD14Q8IZD0 417 aaPredicted RBP12.19□□□□□ -0.46
MSL3-207ENST00000398527 SLC39A3Q9BRY0 314 aa12.19□□□□□ -0.46
MSL3-207ENST00000398527 GPCPD1Q9NPB8 672 aa12.19□□□□□ -0.46
MSL3-207ENST00000398527 CLIP2Q9UDT6 1046 aa12.19□□□□□ -0.46
MSL3-207ENST00000398527 MAFFQ9ULX9 164 aa12.19□□□□□ -0.46
MSL3-207ENST00000398527 V9GYY5 206 aaPredicted RBP12.19□□□□□ -0.46
MSL3-207ENST00000398527 MYH14Q7Z406 1995 aaKnown RBP12.18□□□□□ -0.46
MSL3-207ENST00000398527 RDXP35241 583 aaKnown RBP12.18□□□□□ -0.46
MSL3-207ENST00000398527 CASP7P55210 303 aa12.18□□□□□ -0.46
MSL3-207ENST00000398527 GRIK3Q13003 919 aa12.18□□□□□ -0.46
MSL3-207ENST00000398527 DBN1Q16643 649 aa12.18□□□□□ -0.46
MSL3-207ENST00000398527 DEFB115Q30KQ5 88 aa12.18□□□□□ -0.46
MSL3-207ENST00000398527 TTLL6Q8N841 843 aa12.18□□□□□ -0.46
MSL3-207ENST00000398527 CENPOQ9BU64 300 aa12.18□□□□□ -0.46
MSL3-207ENST00000398527 IRX2Q9BZI1 471 aaPredicted RBP12.18□□□□□ -0.46
MSL3-207ENST00000398527 RPAP3Q9H6T3 665 aaPredicted RBP12.18□□□□□ -0.46
MSL3-207ENST00000398527 IVNS1ABPQ9Y6Y0 642 aa12.18□□□□□ -0.46
MSL3-207ENST00000398527 SMC2O95347 1197 aa12.17□□□□□ -0.46
MSL3-207ENST00000398527 ITGBL1O95965 494 aaPredicted RBP12.17□□□□□ -0.46
MSL3-207ENST00000398527 PYGLP06737 847 aa12.17□□□□□ -0.46
MSL3-207ENST00000398527 TPM1P09493 284 aa12.17□□□□□ -0.46
MSL3-207ENST00000398527 MSL3P1P0C860 447 aa12.17□□□□□ -0.46
MSL3-207ENST00000398527 RPS6KB1P23443 525 aa12.17□□□□□ -0.46
MSL3-207ENST00000398527 GJB2P29033 226 aa12.17□□□□□ -0.46
MSL3-207ENST00000398527 TM4SF1P30408 202 aa12.17□□□□□ -0.46
MSL3-207ENST00000398527 CYP2C19P33261 490 aa12.17□□□□□ -0.46
MSL3-207ENST00000398527 ADCK5Q3MIX3 580 aa12.17□□□□□ -0.46
MSL3-207ENST00000398527 PACS1Q6VY07 963 aa12.17□□□□□ -0.46
MSL3-207ENST00000398527 SND1Q7KZF4 910 aaKnown RBP eCLIP12.17□□□□□ -0.46
MSL3-207ENST00000398527 NDUFAF2Q8N183 169 aa12.17□□□□□ -0.46
MSL3-207ENST00000398527 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.17□□□□□ -0.46
MSL3-207ENST00000398527 TBC1D5Q92609 795 aa12.17□□□□□ -0.46
MSL3-207ENST00000398527 UBAP1Q9NZ09 502 aa12.17□□□□□ -0.46
MSL3-207ENST00000398527 TRIM66O15016 1216 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms