RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 HERVK_113P62684 666 aa30.18■■■□□ 2.42
U2AF1-203ENST00000398137 RAB3GAP1Q15042 981 aa30.18■■■□□ 2.42
U2AF1-203ENST00000398137 USP17L2Q6R6M4 530 aa30.18■■■□□ 2.42
U2AF1-203ENST00000398137 SLAIN1Q8ND83 568 aa30.18■■■□□ 2.42
U2AF1-203ENST00000398137 SWAP70Q9UH65 585 aa30.18■■■□□ 2.42
U2AF1-203ENST00000398137 CCL5P13501 91 aa30.17■■■□□ 2.42
U2AF1-203ENST00000398137 CDK8P49336 464 aa30.17■■■□□ 2.42
U2AF1-203ENST00000398137 IRX3P78415 501 aaPredicted RBP30.17■■■□□ 2.42
U2AF1-203ENST00000398137 CTDSPL2Q05D32 466 aa30.17■■■□□ 2.42
U2AF1-203ENST00000398137 LSG1Q9H089 658 aaKnown RBP30.17■■■□□ 2.42
U2AF1-203ENST00000398137 RBPJLQ9UBG7 517 aa30.17■■■□□ 2.42
U2AF1-203ENST00000398137 GJD2Q9UKL4 321 aa30.17■■■□□ 2.42
U2AF1-203ENST00000398137 LAMA4Q16363 1823 aa30.17■■■□□ 2.42
U2AF1-203ENST00000398137 ZYXQ15942 572 aaKnown RBP30.16■■■□□ 2.42
U2AF1-203ENST00000398137 PXYLP1Q8TE99 480 aa30.16■■■□□ 2.42
U2AF1-203ENST00000398137 KIAA1683Q9H0B3 1180 aa30.16■■■□□ 2.42
U2AF1-203ENST00000398137 MYH8P13535 1937 aa30.16■■■□□ 2.42
U2AF1-203ENST00000398137 SEPT2Q15019 361 aa30.15■■■□□ 2.42
U2AF1-203ENST00000398137 COA7Q96BR5 231 aa30.15■■■□□ 2.42
U2AF1-203ENST00000398137 UNC93B1Q9H1C4 597 aa30.15■■■□□ 2.42
U2AF1-203ENST00000398137 CTNNA3Q9UI47 895 aa30.15■■■□□ 2.42
U2AF1-203ENST00000398137 TAOK2Q9UL54 1235 aa30.15■■■□□ 2.42
U2AF1-203ENST00000398137 U3KPZ7 1027 aaPredicted RBP30.15■■■□□ 2.42
U2AF1-203ENST00000398137 SLC3A2P08195 630 aaKnown RBP30.14■■■□□ 2.42
U2AF1-203ENST00000398137 Q3C1V9 767 aa30.14■■■□□ 2.42
U2AF1-203ENST00000398137 ANAPC4Q9UJX5 808 aa30.14■■■□□ 2.42
U2AF1-203ENST00000398137 A0A1W2PRG0 241 aa30.13■■■□□ 2.41
U2AF1-203ENST00000398137 INHAP05111 366 aa30.13■■■□□ 2.41
U2AF1-203ENST00000398137 GJB1P08034 283 aa30.13■■■□□ 2.41
U2AF1-203ENST00000398137 TBC1D10CQ8IV04 446 aa30.13■■■□□ 2.41
U2AF1-203ENST00000398137 NBPF3Q9H094 633 aa30.13■■■□□ 2.41
U2AF1-203ENST00000398137 RBM8AQ9Y5S9 174 aaKnown RBP30.13■■■□□ 2.41
U2AF1-203ENST00000398137 PRDM1O75626 825 aa30.12■■■□□ 2.41
U2AF1-203ENST00000398137 GJA8P48165 433 aa30.12■■■□□ 2.41
U2AF1-203ENST00000398137 MAP4K1Q92918 833 aa30.12■■■□□ 2.41
U2AF1-203ENST00000398137 FEZ1Q99689 392 aa30.12■■■□□ 2.41
U2AF1-203ENST00000398137 RNF208Q9H0X6 261 aa30.12■■■□□ 2.41
U2AF1-203ENST00000398137 CABP5Q9NP86 173 aa30.12■■■□□ 2.41
U2AF1-203ENST00000398137 BIN2Q9UBW5 565 aaPredicted RBP30.12■■■□□ 2.41
U2AF1-203ENST00000398137 ZNF213O14771 459 aa30.11■■■□□ 2.41
U2AF1-203ENST00000398137 CNMDO75829 334 aa30.11■■■□□ 2.41
U2AF1-203ENST00000398137 VCAM1P19320 739 aa30.11■■■□□ 2.41
U2AF1-203ENST00000398137 UBXN2AP68543 259 aa30.11■■■□□ 2.41
U2AF1-203ENST00000398137 IMMTQ16891 758 aaKnown RBP30.11■■■□□ 2.41
U2AF1-203ENST00000398137 UBE2Q1Q7Z7E8 422 aa30.11■■■□□ 2.41
U2AF1-203ENST00000398137 SIAH1Q8IUQ4 282 aa30.11■■■□□ 2.41
U2AF1-203ENST00000398137 MKNK2Q9HBH9 465 aa30.11■■■□□ 2.41
U2AF1-203ENST00000398137 INCENPQ9NQS7 918 aa30.11■■■□□ 2.41
U2AF1-203ENST00000398137 TACC3Q9Y6A5 838 aa30.11■■■□□ 2.41
U2AF1-203ENST00000398137 RASA1P20936 1047 aa30.1■■■□□ 2.41
U2AF1-203ENST00000398137 PDE4BQ07343 736 aa30.1■■■□□ 2.41
U2AF1-203ENST00000398137 CATSPERGQ6ZRH7 1159 aa30.1■■■□□ 2.41
U2AF1-203ENST00000398137 GPRC5AQ8NFJ5 357 aa30.1■■■□□ 2.41
U2AF1-203ENST00000398137 DDX52Q9Y2R4 599 aaKnown RBP eCLIP30.1■■■□□ 2.41
U2AF1-203ENST00000398137 RLFQ13129 1914 aa30.1■■■□□ 2.41
U2AF1-203ENST00000398137 MPHOSPH10O00566 681 aaKnown RBP30.09■■■□□ 2.41
U2AF1-203ENST00000398137 AKR1B1P15121 316 aa30.09■■■□□ 2.41
U2AF1-203ENST00000398137 USP14P54578 494 aa30.09■■■□□ 2.41
U2AF1-203ENST00000398137 ERVK-9P63128 1117 aa30.09■■■□□ 2.41
U2AF1-203ENST00000398137 ERVK-24P63145 666 aa30.09■■■□□ 2.41
U2AF1-203ENST00000398137 KIAA1755Q5JYT7 1200 aa30.09■■■□□ 2.41
U2AF1-203ENST00000398137 PORCNQ9H237 461 aa30.09■■■□□ 2.41
U2AF1-203ENST00000398137 ZNF287Q9HBT7 754 aa30.09■■■□□ 2.41
U2AF1-203ENST00000398137 USP17L15C9J2P7 530 aa30.08■■■□□ 2.41
U2AF1-203ENST00000398137 USP17L13C9JLJ4 530 aa30.08■■■□□ 2.41
U2AF1-203ENST00000398137 USP17L11C9JVI0 530 aa30.08■■■□□ 2.41
U2AF1-203ENST00000398137 USP17L18D6R9N7 530 aa30.08■■■□□ 2.41
U2AF1-203ENST00000398137 USP17L22D6RA61 530 aa30.08■■■□□ 2.41
U2AF1-203ENST00000398137 USP17L17D6RBQ6 530 aa30.08■■■□□ 2.41
U2AF1-203ENST00000398137 USP17L19D6RCP7 530 aa30.08■■■□□ 2.41
U2AF1-203ENST00000398137 USP17L20D6RJB6 530 aa30.08■■■□□ 2.41
U2AF1-203ENST00000398137 USP17L24Q0WX57 530 aa30.08■■■□□ 2.41
U2AF1-203ENST00000398137 CLEC10AQ8IUN9 316 aa30.08■■■□□ 2.41
U2AF1-203ENST00000398137 REC8O95072 547 aa30.07■■■□□ 2.4
U2AF1-203ENST00000398137 U2AF1L4Q8WU68 220 aaKnown RBP30.07■■■□□ 2.4
U2AF1-203ENST00000398137 CCDC17Q96LX7 622 aa30.07■■■□□ 2.4
U2AF1-203ENST00000398137 PAGR1Q9BTK6 254 aa30.07■■■□□ 2.4
U2AF1-203ENST00000398137 TOMM22Q9NS69 142 aa30.07■■■□□ 2.4
U2AF1-203ENST00000398137 CYP21A2P08686 494 aa30.06■■■□□ 2.4
U2AF1-203ENST00000398137 TRIM32Q13049 653 aa30.06■■■□□ 2.4
U2AF1-203ENST00000398137 AKNAD1Q5T1N1 836 aa30.06■■■□□ 2.4
U2AF1-203ENST00000398137 TMEM179Q6ZVK1 233 aa30.06■■■□□ 2.4
U2AF1-203ENST00000398137 STAG1Q8WVM7 1258 aa30.06■■■□□ 2.4
U2AF1-203ENST00000398137 PAK6Q9NQU5 681 aaPredicted RBP30.06■■■□□ 2.4
U2AF1-203ENST00000398137 NEDD4P46934 1319 aa30.05■■■□□ 2.4
U2AF1-203ENST00000398137 RRP12Q5JTH9 1297 aaKnown RBP30.05■■■□□ 2.4
U2AF1-203ENST00000398137 ZNF444Q8N0Y2 327 aaPredicted RBP30.05■■■□□ 2.4
U2AF1-203ENST00000398137 NKX2-3Q8TAU0 364 aa30.05■■■□□ 2.4
U2AF1-203ENST00000398137 GTF3C2Q8WUA4 911 aaPredicted RBP30.05■■■□□ 2.4
U2AF1-203ENST00000398137 USP6NLQ92738 828 aa30.05■■■□□ 2.4
U2AF1-203ENST00000398137 RPAP3Q9H6T3 665 aaPredicted RBP30.05■■■□□ 2.4
U2AF1-203ENST00000398137 GREB1LQ9C091 1923 aaPredicted RBP30.04■■■□□ 2.4
U2AF1-203ENST00000398137 ORC4O43929 436 aa30.04■■■□□ 2.4
U2AF1-203ENST00000398137 SGPL1O95470 568 aa30.04■■■□□ 2.4
U2AF1-203ENST00000398137 LBX2Q6XYB7 198 aa30.04■■■□□ 2.4
U2AF1-203ENST00000398137 MFSD6Q6ZSS7 791 aa30.04■■■□□ 2.4
U2AF1-203ENST00000398137 TRIB2Q92519 343 aa30.04■■■□□ 2.4
U2AF1-203ENST00000398137 RNF41Q9H4P4 317 aaPredicted RBP30.04■■■□□ 2.4
U2AF1-203ENST00000398137 BTBD7Q9P203 1132 aa30.04■■■□□ 2.4
U2AF1-203ENST00000398137 TAF6LQ9Y6J9 622 aa30.04■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms