RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 SCLT1Q96NL6 688 aa2.64□□□□□ -1.99
HMGN2P39-201ENST00000398005 ELAC2Q9BQ52 826 aaKnown RBP2.64□□□□□ -1.99
HMGN2P39-201ENST00000398005 SARGQ9BW04 601 aa2.64□□□□□ -1.99
HMGN2P39-201ENST00000398005 RHOBTB2Q9BYZ6 727 aa2.64□□□□□ -1.99
HMGN2P39-201ENST00000398005 GSX2Q9BZM3 304 aa2.64□□□□□ -1.99
HMGN2P39-201ENST00000398005 TRIM8Q9BZR9 551 aa2.64□□□□□ -1.99
HMGN2P39-201ENST00000398005 ZCCHC2Q9C0B9 1178 aaKnown RBP2.64□□□□□ -1.99
HMGN2P39-201ENST00000398005 BHLHE41Q9C0J9 482 aaPredicted RBP2.64□□□□□ -1.99
HMGN2P39-201ENST00000398005 MUC3BQ9H195 1237 aa2.64□□□□□ -1.99
HMGN2P39-201ENST00000398005 CLEC4MQ9H2X3 399 aaPredicted RBP2.64□□□□□ -1.99
HMGN2P39-201ENST00000398005 GPAMQ9HCL2 828 aa2.64□□□□□ -1.99
HMGN2P39-201ENST00000398005 ARHGEF4Q9NR80 690 aa2.64□□□□□ -1.99
HMGN2P39-201ENST00000398005 FAM86C1Q9NVL1 165 aa2.64□□□□□ -1.99
HMGN2P39-201ENST00000398005 TLR7Q9NYK1 1049 aaKnown RBP2.64□□□□□ -1.99
HMGN2P39-201ENST00000398005 GMIPQ9P107 970 aa2.64□□□□□ -1.99
HMGN2P39-201ENST00000398005 ZFATQ9P243 1243 aa2.64□□□□□ -1.99
HMGN2P39-201ENST00000398005 KLHL3Q9UH77 587 aa2.64□□□□□ -1.99
HMGN2P39-201ENST00000398005 RCAN3Q9UKA8 241 aa2.64□□□□□ -1.99
HMGN2P39-201ENST00000398005 LUC7L2Q9Y383 392 aaKnown RBP2.64□□□□□ -1.99
HMGN2P39-201ENST00000398005 TNPO3Q9Y5L0 923 aaKnown RBP2.64□□□□□ -1.99
HMGN2P39-201ENST00000398005 TNKSO95271 1327 aa2.64□□□□□ -1.99
HMGN2P39-201ENST00000398005 SLC35F4A4IF30 521 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 SLC22A31A6NKX4 558 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 FAM177BA6PVY3 158 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 CCER2I3L3R5 266 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 RNF225M0QZC1 329 aaPredicted RBP2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 NEMP1O14524 444 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 SLC26A4O43511 780 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 ABLIM3O94929 683 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 NPTXRO95502 500 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 APPP05067 770 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 JMJD7P0C870 316 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 PF4V1P10720 104 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 PABPC1P11940 636 aaKnown RBP2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 LIG1P18858 919 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 PLCG1P19174 1290 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 CTSOP43234 321 aaPredicted RBP2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 ID4P47928 161 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 CDK8P49336 464 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 PPP2R2AP63151 447 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 PTPN11Q06124 597 aaPredicted RBP2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 PCDH1Q08174 1060 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 CHAF1AQ13111 956 aaPredicted RBP2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 ZNF460Q14592 562 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 SAFBQ15424 915 aaKnown RBP eCLIP2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 SEPT7Q16181 437 aaKnown RBP2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 SLC4A8Q2Y0W8 1093 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 CFAP100Q494V2 611 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 ARHGAP29Q52LW3 1261 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 ALFQ53S48 1182 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 WIPI1Q5MNZ9 446 aaPredicted RBP2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 FAM83BQ5T0W9 1011 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 INTS3Q68E01 1043 aaKnown RBP2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 IQSEC1Q6DN90 963 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 ZNF280DQ6N043 979 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 GPAT2Q6NUI2 795 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 ERAP2Q6P179 960 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 C1orf228Q6PIY5 440 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 NSMFQ6X4W1 530 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 UBE2R2Q712K3 238 aaPredicted RBP2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 NLRC3Q7RTR2 1065 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 BRAPQ7Z569 592 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 SVOPQ8N4V2 548 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 CCDC155Q8N6L0 562 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 TEX19Q8NA77 164 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 LRRN4CLQ8ND94 238 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 ABCF1Q8NE71 845 aaKnown RBP eCLIP2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 DDX54Q8TDD1 881 aaKnown RBP2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 STK35Q8TDR2 534 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 KLHL6Q8WZ60 621 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 RUNDC1Q96C34 613 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 ATG4CQ96DT6 458 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 CLIP3Q96DZ5 547 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 ACSBG1Q96GR2 724 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 LRGUKQ96M69 825 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 SLC9A7Q96T83 725 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 TSEN34Q9BSV6 310 aaKnown RBP2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 RASSF4Q9H2L5 321 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 RUBCNLQ9H714 662 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 IFT22Q9H7X7 185 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 AS3MTQ9HBK9 375 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 OSGEPQ9NPF4 335 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 JADE2Q9NQC1 790 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 SUCOQ9UBS9 1254 aaKnown RBP2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 REV1Q9UBZ9 1251 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 PCDHA4Q9UN74 947 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 ANKRD6Q9Y2G4 727 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 CORINQ9Y5Q5 1042 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 SCINQ9Y6U3 715 aa2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 FRMPD2Q68DX3 1309 aaPredicted RBP2.63□□□□□ -1.99
HMGN2P39-201ENST00000398005 ANO9A1A5B4 782 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 ANKRD34BA5PLL1 514 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 FAM83GA6ND36 823 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 NFKBIEO00221 500 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 EXOC5O00471 708 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 APAF1O14727 1248 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 SPINT1O43278 529 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 ZEB2O60315 1214 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 NBNO60934 754 aa2.62□□□□□ -1.99
HMGN2P39-201ENST00000398005 EFCAB14O75071 495 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms