RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 TIGD1Q96MW7 591 aa12.61□□□□□ -0.39
TTC28-201ENST00000397906 PSMB7Q99436 277 aa12.61□□□□□ -0.39
TTC28-201ENST00000397906 KRT40Q6A162 431 aa12.61□□□□□ -0.39
TTC28-201ENST00000397906 GTF3C6Q969F1 213 aa12.61□□□□□ -0.39
TTC28-201ENST00000397906 SEC24BO95487 1268 aa12.61□□□□□ -0.39
TTC28-201ENST00000397906 MIGA2Q7L4E1 593 aa12.61□□□□□ -0.39
TTC28-201ENST00000397906 SMC6Q96SB8 1091 aa12.61□□□□□ -0.39
TTC28-201ENST00000397906 CTTNBP2NLQ9P2B4 639 aa12.61□□□□□ -0.39
TTC28-201ENST00000397906 ZEB2O60315 1214 aa12.61□□□□□ -0.39
TTC28-201ENST00000397906 SYT10Q6XYQ8 523 aa12.61□□□□□ -0.39
TTC28-201ENST00000397906 PCDHB13Q9Y5F0 798 aa12.61□□□□□ -0.39
TTC28-201ENST00000397906 SYNJ2BP-COX16A0A087WUM0 186 aa12.61□□□□□ -0.39
TTC28-201ENST00000397906 COX16Q9P0S2 106 aa12.61□□□□□ -0.39
TTC28-201ENST00000397906 NOLC1Q14978 699 aaKnown RBP eCLIP12.61□□□□□ -0.39
TTC28-201ENST00000397906 ZNF654Q8IZM8 581 aa12.61□□□□□ -0.39
TTC28-201ENST00000397906 RTEL1Q9NZ71 1219 aa12.61□□□□□ -0.39
TTC28-201ENST00000397906 FBXO11Q86XK2 927 aa12.61□□□□□ -0.39
TTC28-201ENST00000397906 XDHP47989 1333 aa12.6□□□□□ -0.39
TTC28-201ENST00000397906 TNNC1P63316 161 aa12.6□□□□□ -0.39
TTC28-201ENST00000397906 K7ENM7 598 aa12.6□□□□□ -0.39
TTC28-201ENST00000397906 GDF11O95390 407 aa12.6□□□□□ -0.39
TTC28-201ENST00000397906 DALRD3Q5D0E6 543 aaKnown RBP12.6□□□□□ -0.39
TTC28-201ENST00000397906 STK24Q9Y6E0 443 aa12.6□□□□□ -0.39
TTC28-201ENST00000397906 JAK2O60674 1132 aa12.6□□□□□ -0.39
TTC28-201ENST00000397906 BMS1Q14692 1282 aaKnown RBP12.6□□□□□ -0.39
TTC28-201ENST00000397906 CD2APQ9Y5K6 639 aa12.6□□□□□ -0.39
TTC28-201ENST00000397906 NPHP4O75161 1426 aaPredicted RBP12.6□□□□□ -0.39
TTC28-201ENST00000397906 PNOCQ13519 176 aa12.6□□□□□ -0.39
TTC28-201ENST00000397906 SEC31BQ9NQW1 1179 aa12.6□□□□□ -0.39
TTC28-201ENST00000397906 MAP3K15Q6ZN16 1313 aa12.6□□□□□ -0.39
TTC28-201ENST00000397906 LRRIQ4A6NIV6 560 aa12.6□□□□□ -0.39
TTC28-201ENST00000397906 DLATP10515 647 aaKnown RBP12.6□□□□□ -0.39
TTC28-201ENST00000397906 SEPT12Q8IYM1 358 aa12.6□□□□□ -0.39
TTC28-201ENST00000397906 UBL4BQ8N7F7 174 aa12.6□□□□□ -0.39
TTC28-201ENST00000397906 NELFBQ8WX92 580 aa12.6□□□□□ -0.39
TTC28-201ENST00000397906 SNX21Q969T3 373 aa12.6□□□□□ -0.39
TTC28-201ENST00000397906 TAB2Q9NYJ8 693 aa12.6□□□□□ -0.39
TTC28-201ENST00000397906 DDX25Q9UHL0 483 aaKnown RBP12.6□□□□□ -0.39
TTC28-201ENST00000397906 GCC2Q8IWJ2 1684 aa12.6□□□□□ -0.39
TTC28-201ENST00000397906 CAPN9O14815 690 aa12.6□□□□□ -0.39
TTC28-201ENST00000397906 AKT3Q9Y243 479 aa12.6□□□□□ -0.39
TTC28-201ENST00000397906 TPD52P55327 224 aaPredicted RBP12.6□□□□□ -0.39
TTC28-201ENST00000397906 IFNL3Q8IZI9 196 aa12.6□□□□□ -0.39
TTC28-201ENST00000397906 IL17REQ8NFR9 667 aa12.6□□□□□ -0.39
TTC28-201ENST00000397906 P4HA1P13674 534 aa12.6□□□□□ -0.39
TTC28-201ENST00000397906 ITIH3Q06033 890 aa12.6□□□□□ -0.39
TTC28-201ENST00000397906 ITKQ08881 620 aa12.6□□□□□ -0.39
TTC28-201ENST00000397906 KCTD2Q14681 263 aa12.6□□□□□ -0.39
TTC28-201ENST00000397906 CDC37L1Q7L3B6 337 aa12.6□□□□□ -0.39
TTC28-201ENST00000397906 MRPL11Q9Y3B7 192 aaKnown RBP12.6□□□□□ -0.39
TTC28-201ENST00000397906 SPDYE16A6NNV3 312 aaPredicted RBP12.59□□□□□ -0.39
TTC28-201ENST00000397906 BCRP11274 1271 aa12.59□□□□□ -0.39
TTC28-201ENST00000397906 SPDYE2Q495Y8 402 aa12.59□□□□□ -0.39
TTC28-201ENST00000397906 C4orf50Q6ZRC1 276 aa12.59□□□□□ -0.39
TTC28-201ENST00000397906 ZBTB1Q9Y2K1 713 aa12.59□□□□□ -0.39
TTC28-201ENST00000397906 ADGBQ8N7X0 1667 aa12.59□□□□□ -0.39
TTC28-201ENST00000397906 PNMA1Q8ND90 353 aa12.59□□□□□ -0.39
TTC28-201ENST00000397906 UBN2Q6ZU65 1347 aa12.59□□□□□ -0.39
TTC28-201ENST00000397906 ZNF335Q9H4Z2 1342 aaPredicted RBP12.59□□□□□ -0.39
TTC28-201ENST00000397906 PZPP20742 1482 aa12.59□□□□□ -0.39
TTC28-201ENST00000397906 ARHGEF12Q9NZN5 1544 aa12.59□□□□□ -0.39
TTC28-201ENST00000397906 VWA3BQ502W6 1294 aa12.59□□□□□ -0.39
TTC28-201ENST00000397906 FMNL3Q8IVF7 1028 aa12.59□□□□□ -0.39
TTC28-201ENST00000397906 GPR101Q96P66 508 aaPredicted RBP12.59□□□□□ -0.39
TTC28-201ENST00000397906 SEPT10Q9P0V9 454 aa12.59□□□□□ -0.39
TTC28-201ENST00000397906 SCYL2Q6P3W7 929 aa12.59□□□□□ -0.39
TTC28-201ENST00000397906 ZBTB8OSQ8IWT0 167 aa12.59□□□□□ -0.39
TTC28-201ENST00000397906 SEPT9Q9UHD8 586 aaPredicted RBP12.59□□□□□ -0.39
TTC28-201ENST00000397906 ZNF365Q70YC5 407 aa12.59□□□□□ -0.39
TTC28-201ENST00000397906 TRMT44Q8IYL2 757 aaKnown RBP12.59□□□□□ -0.39
TTC28-201ENST00000397906 ABI1Q8IZP0 508 aa12.59□□□□□ -0.39
TTC28-201ENST00000397906 CSRNP2Q9H175 543 aa12.59□□□□□ -0.39
TTC28-201ENST00000397906 SRP68Q9UHB9 627 aaKnown RBP12.59□□□□□ -0.39
TTC28-201ENST00000397906 OPA1O60313 960 aa12.59□□□□□ -0.39
TTC28-201ENST00000397906 NOP9Q86U38 636 aaKnown RBP12.59□□□□□ -0.39
TTC28-201ENST00000397906 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.59□□□□□ -0.39
TTC28-201ENST00000397906 ANKS4BQ8N8V4 417 aa12.59□□□□□ -0.39
TTC28-201ENST00000397906 SGSM2O43147 1006 aa12.59□□□□□ -0.39
TTC28-201ENST00000397906 ZNF202O95125 648 aa12.59□□□□□ -0.39
TTC28-201ENST00000397906 ARAP3Q8WWN8 1544 aa12.59□□□□□ -0.39
TTC28-201ENST00000397906 DISP1Q96F81 1524 aa12.59□□□□□ -0.39
TTC28-201ENST00000397906 KLRF2D3W0D1 207 aa12.58□□□□□ -0.39
TTC28-201ENST00000397906 GPR161Q8N6U8 529 aaKnown RBP12.58□□□□□ -0.39
TTC28-201ENST00000397906 PLEKHA4Q9H4M7 779 aa12.58□□□□□ -0.39
TTC28-201ENST00000397906 PALD1Q9ULE6 856 aa12.58□□□□□ -0.39
TTC28-201ENST00000397906 PRAMEF22A3QJZ6 481 aa12.58□□□□□ -0.4
TTC28-201ENST00000397906 PDE6AP16499 860 aa12.58□□□□□ -0.4
TTC28-201ENST00000397906 OSBPP22059 807 aa12.58□□□□□ -0.4
TTC28-201ENST00000397906 EEPD1Q7L9B9 569 aa12.58□□□□□ -0.4
TTC28-201ENST00000397906 SMC5Q8IY18 1101 aa12.58□□□□□ -0.4
TTC28-201ENST00000397906 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.58□□□□□ -0.4
TTC28-201ENST00000397906 POSTNQ15063 836 aa12.58□□□□□ -0.4
TTC28-201ENST00000397906 HSPA1LP34931 641 aa12.58□□□□□ -0.4
TTC28-201ENST00000397906 ZWINTO95229 277 aa12.58□□□□□ -0.4
TTC28-201ENST00000397906 ADORA1P30542 326 aa12.58□□□□□ -0.4
TTC28-201ENST00000397906 PUS3Q9BZE2 481 aaKnown RBP12.58□□□□□ -0.4
TTC28-201ENST00000397906 PHKA1P46020 1223 aa12.58□□□□□ -0.4
TTC28-201ENST00000397906 FAM207AQ9NSI2 230 aaPredicted RBP12.58□□□□□ -0.4
TTC28-201ENST00000397906 INTS4Q96HW7 963 aaKnown RBP12.58□□□□□ -0.4
TTC28-201ENST00000397906 ADPGKQ9BRR6 497 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms