RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 ATRIPQ8WXE1 791 aa18.09■□□□□ 0.49
CHMP1A-201ENST00000397901 FOXP1Q9H334 677 aaPredicted RBP18.09■□□□□ 0.49
CHMP1A-201ENST00000397901 LTBP4Q8N2S1 1624 aa18.08■□□□□ 0.49
CHMP1A-201ENST00000397901 GSG1L2A8MUP6 293 aa18.08■□□□□ 0.49
CHMP1A-201ENST00000397901 MAP2K2P36507 400 aa18.08■□□□□ 0.49
CHMP1A-201ENST00000397901 AFMP43652 599 aa18.08■□□□□ 0.49
CHMP1A-201ENST00000397901 EIF5P55010 431 aaKnown RBP18.08■□□□□ 0.49
CHMP1A-201ENST00000397901 ANKRD20A12PQ8NF67 263 aa18.08■□□□□ 0.49
CHMP1A-201ENST00000397901 KRT23Q9C075 422 aa18.08■□□□□ 0.49
CHMP1A-201ENST00000397901 CNNM2Q9H8M5 875 aa18.08■□□□□ 0.49
CHMP1A-201ENST00000397901 SRPRBQ9Y5M8 271 aaKnown RBP18.08■□□□□ 0.49
CHMP1A-201ENST00000397901 SPATA31A1Q5TZJ5 1347 aa18.08■□□□□ 0.48
CHMP1A-201ENST00000397901 FAM205CA6NFA0 338 aa18.08■□□□□ 0.48
CHMP1A-201ENST00000397901 AKR1B15C9JRZ8 316 aaPredicted RBP18.08■□□□□ 0.48
CHMP1A-201ENST00000397901 ATP6V1AP38606 617 aa18.08■□□□□ 0.48
CHMP1A-201ENST00000397901 DNAJC21Q5F1R6 531 aaKnown RBP18.08■□□□□ 0.48
CHMP1A-201ENST00000397901 CDCA7Q9BWT1 371 aaPredicted RBP18.08■□□□□ 0.48
CHMP1A-201ENST00000397901 CCDC196A0A1B0GTZ2 297 aa18.07■□□□□ 0.48
CHMP1A-201ENST00000397901 DEXIO95424 95 aa18.07■□□□□ 0.48
CHMP1A-201ENST00000397901 IL6STP40189 918 aaPredicted RBP18.07■□□□□ 0.48
CHMP1A-201ENST00000397901 MAP3K12Q12852 859 aa18.07■□□□□ 0.48
CHMP1A-201ENST00000397901 RASGRF1Q13972 1273 aa18.07■□□□□ 0.48
CHMP1A-201ENST00000397901 PUM3Q15397 648 aaKnown RBP18.07■□□□□ 0.48
CHMP1A-201ENST00000397901 HSP90B2PQ58FF3 399 aa18.07■□□□□ 0.48
CHMP1A-201ENST00000397901 LCORLQ8N3X6 602 aa18.07■□□□□ 0.48
CHMP1A-201ENST00000397901 CRACR2BQ8N4Y2 399 aaPredicted RBP18.07■□□□□ 0.48
CHMP1A-201ENST00000397901 RAB21Q9UL25 225 aa18.07■□□□□ 0.48
CHMP1A-201ENST00000397901 A0A1B0GTH6 734 aa18.07■□□□□ 0.48
CHMP1A-201ENST00000397901 ERVV-1B6SEH8 477 aa18.07■□□□□ 0.48
CHMP1A-201ENST00000397901 CCDC175P0C221 793 aa18.07■□□□□ 0.48
CHMP1A-201ENST00000397901 TRIML1Q8N9V2 468 aa18.07■□□□□ 0.48
CHMP1A-201ENST00000397901 LPIN2Q92539 896 aa18.07■□□□□ 0.48
CHMP1A-201ENST00000397901 MED4Q9NPJ6 270 aa18.07■□□□□ 0.48
CHMP1A-201ENST00000397901 A0A087X0B3 334 aa18.06■□□□□ 0.48
CHMP1A-201ENST00000397901 ERICH2A1L162 156 aa18.06■□□□□ 0.48
CHMP1A-201ENST00000397901 N4BP1O75113 896 aaKnown RBP18.06■□□□□ 0.48
CHMP1A-201ENST00000397901 RBL2Q08999 1139 aa18.06■□□□□ 0.48
CHMP1A-201ENST00000397901 RAD9BQ6WBX8 426 aa18.06■□□□□ 0.48
CHMP1A-201ENST00000397901 RPAINQ86UA6 219 aa18.06■□□□□ 0.48
CHMP1A-201ENST00000397901 SMYD4Q8IYR2 804 aaPredicted RBP18.06■□□□□ 0.48
CHMP1A-201ENST00000397901 MICALL1Q8N3F8 863 aa18.06■□□□□ 0.48
CHMP1A-201ENST00000397901 ZNF579Q8NAF0 562 aaKnown RBP18.06■□□□□ 0.48
CHMP1A-201ENST00000397901 MIGA1Q8NAN2 632 aa18.06■□□□□ 0.48
CHMP1A-201ENST00000397901 EPSTI1Q96J88 318 aa18.06■□□□□ 0.48
CHMP1A-201ENST00000397901 L1RE1Q9UN81 338 aa18.06■□□□□ 0.48
CHMP1A-201ENST00000397901 SLC4A4Q9Y6R1 1079 aa18.06■□□□□ 0.48
CHMP1A-201ENST00000397901 PHLPP1O60346 1717 aa18.06■□□□□ 0.48
CHMP1A-201ENST00000397901 CD44P16070 742 aaKnown RBP18.06■□□□□ 0.48
CHMP1A-201ENST00000397901 CHMP4BP1P59074 171 aa18.06■□□□□ 0.48
CHMP1A-201ENST00000397901 TUBB4BP68371 445 aa18.06■□□□□ 0.48
CHMP1A-201ENST00000397901 KANK3Q6NY19 840 aa18.06■□□□□ 0.48
CHMP1A-201ENST00000397901 PPFIBP1Q86W92 1011 aa18.06■□□□□ 0.48
CHMP1A-201ENST00000397901 IGSF22Q8N9C0 903 aa18.06■□□□□ 0.48
CHMP1A-201ENST00000397901 THRAP3Q9Y2W1 955 aaKnown RBP18.06■□□□□ 0.48
CHMP1A-201ENST00000397901 hCG_1642624A0A1W2PR95 340 aa18.05■□□□□ 0.48
CHMP1A-201ENST00000397901 ANKRD65E5RJM6 399 aa18.05■□□□□ 0.48
CHMP1A-201ENST00000397901 SRGAP1Q7Z6B7 1085 aa18.05■□□□□ 0.48
CHMP1A-201ENST00000397901 ZNF654Q8IZM8 581 aa18.05■□□□□ 0.48
CHMP1A-201ENST00000397901 MSANTD4Q8NCY6 345 aa18.05■□□□□ 0.48
CHMP1A-201ENST00000397901 ACBD3Q9H3P7 528 aa18.05■□□□□ 0.48
CHMP1A-201ENST00000397901 PUF60Q9UHX1 559 aaKnown RBP18.05■□□□□ 0.48
CHMP1A-201ENST00000397901 SUFUQ9UMX1 484 aa18.05■□□□□ 0.48
CHMP1A-201ENST00000397901 CEP131Q9UPN4 1083 aa18.05■□□□□ 0.48
CHMP1A-201ENST00000397901 COBLO75128 1261 aa18.05■□□□□ 0.48
CHMP1A-201ENST00000397901 ADAMTS2O95450 1211 aa18.05■□□□□ 0.48
CHMP1A-201ENST00000397901 ERCC5P28715 1186 aaPredicted RBP18.05■□□□□ 0.48
CHMP1A-201ENST00000397901 APTXQ7Z2E3 356 aaKnown RBP18.05■□□□□ 0.48
CHMP1A-201ENST00000397901 DZIP3Q86Y13 1208 aaKnown RBP18.05■□□□□ 0.48
CHMP1A-201ENST00000397901 FANCBQ8NB91 859 aa18.05■□□□□ 0.48
CHMP1A-201ENST00000397901 ANKZF1Q9H8Y5 726 aa18.05■□□□□ 0.48
CHMP1A-201ENST00000397901 SYNRGQ9UMZ2 1314 aa18.04■□□□□ 0.48
CHMP1A-201ENST00000397901 DDB1Q16531 1140 aa18.04■□□□□ 0.48
CHMP1A-201ENST00000397901 ZNF34Q8IZ26 560 aa18.04■□□□□ 0.48
CHMP1A-201ENST00000397901 SPATA20Q8TB22 786 aa18.04■□□□□ 0.48
CHMP1A-201ENST00000397901 STAG1Q8WVM7 1258 aa18.04■□□□□ 0.48
CHMP1A-201ENST00000397901 SHISA4Q96DD7 197 aa18.04■□□□□ 0.48
CHMP1A-201ENST00000397901 PANX2Q96RD6 677 aa18.04■□□□□ 0.48
CHMP1A-201ENST00000397901 VPS54Q9P1Q0 977 aa18.04■□□□□ 0.48
CHMP1A-201ENST00000397901 ADGRG1Q9Y653 693 aa18.04■□□□□ 0.48
CHMP1A-201ENST00000397901 CHD4Q14839 1912 aa18.04■□□□□ 0.48
CHMP1A-201ENST00000397901 SLIT2O94813 1529 aa18.04■□□□□ 0.48
CHMP1A-201ENST00000397901 PDE8AO60658 829 aa18.04■□□□□ 0.48
CHMP1A-201ENST00000397901 FGFR2P21802 821 aa18.04■□□□□ 0.48
CHMP1A-201ENST00000397901 USP8P40818 1118 aa18.04■□□□□ 0.48
CHMP1A-201ENST00000397901 EARS2Q5JPH6 523 aaKnown RBP18.04■□□□□ 0.48
CHMP1A-201ENST00000397901 EP400NLQ6ZTU2 488 aa18.04■□□□□ 0.48
CHMP1A-201ENST00000397901 NACAP1Q9BZK3 213 aa18.04■□□□□ 0.48
CHMP1A-201ENST00000397901 NID2Q14112 1375 aa18.03■□□□□ 0.48
CHMP1A-201ENST00000397901 PRDM1O75626 825 aa18.03■□□□□ 0.48
CHMP1A-201ENST00000397901 SLC5A1P13866 664 aa18.03■□□□□ 0.48
CHMP1A-201ENST00000397901 SPATA1Q5VX52 437 aa18.03■□□□□ 0.48
CHMP1A-201ENST00000397901 CEP112Q8N8E3 955 aa18.03■□□□□ 0.48
CHMP1A-201ENST00000397901 CCDC102AQ96A19 550 aa18.03■□□□□ 0.48
CHMP1A-201ENST00000397901 GBP3Q9H0R5 595 aa18.03■□□□□ 0.48
CHMP1A-201ENST00000397901 TRIM75PA6NK02 468 aa18.03■□□□□ 0.48
CHMP1A-201ENST00000397901 ERLIN2O94905 339 aa18.03■□□□□ 0.48
CHMP1A-201ENST00000397901 STAMQ92783 540 aa18.03■□□□□ 0.48
CHMP1A-201ENST00000397901 PAGE5Q96GU1 130 aa18.03■□□□□ 0.48
CHMP1A-201ENST00000397901 UBAC1Q9BSL1 405 aa18.03■□□□□ 0.48
CHMP1A-201ENST00000397901 ABCB6Q9NP58 842 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms