RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 MFSD14CQ5VZR4 134 aa17.2■□□□□ 0.34
SNRNP25-203ENST00000397876 C7orf61Q8IZ16 206 aa17.2■□□□□ 0.34
SNRNP25-203ENST00000397876 DYNLL2Q96FJ2 89 aa17.2■□□□□ 0.34
SNRNP25-203ENST00000397876 BAZ2AQ9UIF9 1905 aaKnown RBP17.19■□□□□ 0.34
SNRNP25-203ENST00000397876 A0A0G2JMZ2 1700 aa17.19■□□□□ 0.34
SNRNP25-203ENST00000397876 A0A1W2PPC1 479 aa17.19■□□□□ 0.34
SNRNP25-203ENST00000397876 AKR1B1P15121 316 aa17.19■□□□□ 0.34
SNRNP25-203ENST00000397876 CCND3P30281 292 aaPredicted RBP17.19■□□□□ 0.34
SNRNP25-203ENST00000397876 MNX1P50219 401 aaPredicted RBP17.19■□□□□ 0.34
SNRNP25-203ENST00000397876 ICA1Q05084 483 aa17.19■□□□□ 0.34
SNRNP25-203ENST00000397876 GRB14Q14449 540 aa17.19■□□□□ 0.34
SNRNP25-203ENST00000397876 LPAR1Q92633 364 aa17.19■□□□□ 0.34
SNRNP25-203ENST00000397876 CCDC17Q96LX7 622 aa17.19■□□□□ 0.34
SNRNP25-203ENST00000397876 HOXC10Q9NYD6 342 aa17.19■□□□□ 0.34
SNRNP25-203ENST00000397876 SLC4A4Q9Y6R1 1079 aa17.19■□□□□ 0.34
SNRNP25-203ENST00000397876 SMARCA5O60264 1052 aaPredicted RBP17.18■□□□□ 0.34
SNRNP25-203ENST00000397876 HOXC6P09630 235 aa17.18■□□□□ 0.34
SNRNP25-203ENST00000397876 C12orf60Q5U649 245 aa17.18■□□□□ 0.34
SNRNP25-203ENST00000397876 MB21D1Q8N884 522 aa17.18■□□□□ 0.34
SNRNP25-203ENST00000397876 GPATCH3Q96I76 525 aa17.18■□□□□ 0.34
SNRNP25-203ENST00000397876 ECHDC1Q9NTX5 307 aa17.18■□□□□ 0.34
SNRNP25-203ENST00000397876 RANBP2P49792 3224 aaKnown RBP17.17■□□□□ 0.34
SNRNP25-203ENST00000397876 ZNF236Q9UL36 1845 aa17.17■□□□□ 0.34
SNRNP25-203ENST00000397876 CYP2D7A0A087X1C5 515 aa17.17■□□□□ 0.34
SNRNP25-203ENST00000397876 USP17L12C9JPN9 530 aa17.17■□□□□ 0.34
SNRNP25-203ENST00000397876 USP17L21D6R901 530 aa17.17■□□□□ 0.34
SNRNP25-203ENST00000397876 CDK8P49336 464 aa17.17■□□□□ 0.34
SNRNP25-203ENST00000397876 ATP2B2Q01814 1243 aa17.17■□□□□ 0.34
SNRNP25-203ENST00000397876 C16orf86Q6ZW13 317 aa17.17■□□□□ 0.34
SNRNP25-203ENST00000397876 CLEC10AQ8IUN9 316 aa17.17■□□□□ 0.34
SNRNP25-203ENST00000397876 MOV10L1Q9BXT6 1211 aaKnown RBP17.17■□□□□ 0.34
SNRNP25-203ENST00000397876 VCPKMTQ9H867 229 aa17.17■□□□□ 0.34
SNRNP25-203ENST00000397876 TMX2Q9Y320 296 aa17.17■□□□□ 0.34
SNRNP25-203ENST00000397876 FLOT1O75955 427 aa17.16■□□□□ 0.34
SNRNP25-203ENST00000397876 CHGBP05060 677 aa17.16■□□□□ 0.34
SNRNP25-203ENST00000397876 LHX8Q68G74 356 aa17.16■□□□□ 0.34
SNRNP25-203ENST00000397876 SPICE1Q8N0Z3 855 aa17.16■□□□□ 0.34
SNRNP25-203ENST00000397876 SHCBP1Q8NEM2 672 aa17.16■□□□□ 0.34
SNRNP25-203ENST00000397876 SPATC1LQ9H0A9 340 aa17.16■□□□□ 0.34
SNRNP25-203ENST00000397876 PUS7LQ9H0K6 701 aaKnown RBP17.16■□□□□ 0.34
SNRNP25-203ENST00000397876 FLRT1Q9NZU1 646 aa17.16■□□□□ 0.34
SNRNP25-203ENST00000397876 ARPP21Q9UBL0 812 aaPredicted RBP17.16■□□□□ 0.34
SNRNP25-203ENST00000397876 STAP2Q9UGK3 403 aa17.16■□□□□ 0.34
SNRNP25-203ENST00000397876 ZMYND8Q9ULU4 1186 aaPredicted RBP17.16■□□□□ 0.34
SNRNP25-203ENST00000397876 FRMPD3Q5JV73 1810 aa17.16■□□□□ 0.34
SNRNP25-203ENST00000397876 PFASO15067 1338 aa17.16■□□□□ 0.34
SNRNP25-203ENST00000397876 WDR46O15213 610 aaKnown RBP17.15■□□□□ 0.34
SNRNP25-203ENST00000397876 STRNO43815 780 aa17.15■□□□□ 0.34
SNRNP25-203ENST00000397876 MSCO60682 206 aa17.15■□□□□ 0.34
SNRNP25-203ENST00000397876 DSG3P32926 999 aa17.15■□□□□ 0.34
SNRNP25-203ENST00000397876 PLS1Q14651 629 aa17.15■□□□□ 0.34
SNRNP25-203ENST00000397876 KIAA1755Q5JYT7 1200 aa17.15■□□□□ 0.34
SNRNP25-203ENST00000397876 DPP9Q86TI2 863 aa17.15■□□□□ 0.34
SNRNP25-203ENST00000397876 NPLOC4Q8TAT6 608 aa17.15■□□□□ 0.34
SNRNP25-203ENST00000397876 RLFQ13129 1914 aa17.15■□□□□ 0.34
SNRNP25-203ENST00000397876 SMIM22K7EJ46 135 aa17.14■□□□□ 0.33
SNRNP25-203ENST00000397876 COL6A1P12109 1028 aa17.14■□□□□ 0.33
SNRNP25-203ENST00000397876 ERCC3P19447 782 aa17.14■□□□□ 0.33
SNRNP25-203ENST00000397876 ADORA2AP29274 412 aa17.14■□□□□ 0.33
SNRNP25-203ENST00000397876 CNGA1P29973 690 aa17.14■□□□□ 0.33
SNRNP25-203ENST00000397876 CTR9Q6PD62 1173 aa17.14■□□□□ 0.33
SNRNP25-203ENST00000397876 SIAH1Q8IUQ4 282 aa17.14■□□□□ 0.33
SNRNP25-203ENST00000397876 KBTBD3Q8NAB2 608 aa17.14■□□□□ 0.33
SNRNP25-203ENST00000397876 ATG4CQ96DT6 458 aa17.14■□□□□ 0.33
SNRNP25-203ENST00000397876 MROH8Q9H579 483 aa17.14■□□□□ 0.33
SNRNP25-203ENST00000397876 KANSL2Q9H9L4 492 aa17.14■□□□□ 0.33
SNRNP25-203ENST00000397876 SLC5A4Q9NY91 659 aa17.14■□□□□ 0.33
SNRNP25-203ENST00000397876 DDX20Q9UHI6 824 aaKnown RBP17.14■□□□□ 0.33
SNRNP25-203ENST00000397876 EEF2P13639 858 aaKnown RBP17.13■□□□□ 0.33
SNRNP25-203ENST00000397876 SYN1P17600 705 aa17.13■□□□□ 0.33
SNRNP25-203ENST00000397876 CYP2C19P33261 490 aa17.13■□□□□ 0.33
SNRNP25-203ENST00000397876 SAMD1Q6SPF0 538 aaPredicted RBP17.13■□□□□ 0.33
SNRNP25-203ENST00000397876 GDF15Q99988 308 aa17.13■□□□□ 0.33
SNRNP25-203ENST00000397876 DCTPP1Q9H773 170 aa17.13■□□□□ 0.33
SNRNP25-203ENST00000397876 GOPCQ9HD26 462 aa17.13■□□□□ 0.33
SNRNP25-203ENST00000397876 BMP8BP34820 402 aa17.12■□□□□ 0.33
SNRNP25-203ENST00000397876 OLFML2BQ68BL8 750 aa17.12■□□□□ 0.33
SNRNP25-203ENST00000397876 NCAPG2Q86XI2 1143 aa17.12■□□□□ 0.33
SNRNP25-203ENST00000397876 ABRAQ8N0Z2 381 aa17.12■□□□□ 0.33
SNRNP25-203ENST00000397876 APPBP2Q92624 585 aa17.12■□□□□ 0.33
SNRNP25-203ENST00000397876 STRBPQ96SI9 672 aaKnown RBP17.12■□□□□ 0.33
SNRNP25-203ENST00000397876 PARP14Q460N5 1801 aa17.12■□□□□ 0.33
SNRNP25-203ENST00000397876 RAD21O60216 631 aa17.11■□□□□ 0.33
SNRNP25-203ENST00000397876 ZFYP08048 801 aaPredicted RBP17.11■□□□□ 0.33
SNRNP25-203ENST00000397876 CYBAP13498 195 aa17.11■□□□□ 0.33
SNRNP25-203ENST00000397876 SBK1Q52WX2 424 aa17.11■□□□□ 0.33
SNRNP25-203ENST00000397876 TSHZ3Q63HK5 1081 aa17.11■□□□□ 0.33
SNRNP25-203ENST00000397876 GIMAP6Q6P9H5 292 aa17.11■□□□□ 0.33
SNRNP25-203ENST00000397876 ROBO3Q96MS0 1386 aa17.11■□□□□ 0.33
SNRNP25-203ENST00000397876 RNF113AO15541 343 aaKnown RBP17.1■□□□□ 0.33
SNRNP25-203ENST00000397876 SLC25A27O95847 323 aa17.1■□□□□ 0.33
SNRNP25-203ENST00000397876 FCER1AP12319 257 aa17.1■□□□□ 0.33
SNRNP25-203ENST00000397876 MAGEA10P43363 369 aaPredicted RBP17.1■□□□□ 0.33
SNRNP25-203ENST00000397876 LRRC26Q2I0M4 334 aa17.1■□□□□ 0.33
SNRNP25-203ENST00000397876 LRRFIP1Q32MZ4 808 aaKnown RBP17.1■□□□□ 0.33
SNRNP25-203ENST00000397876 TRPV1Q8NER1 839 aa17.1■□□□□ 0.33
SNRNP25-203ENST00000397876 OSBP2Q969R2 916 aa17.1■□□□□ 0.33
SNRNP25-203ENST00000397876 MKNK2Q9HBH9 465 aa17.1■□□□□ 0.33
SNRNP25-203ENST00000397876 GREB1LQ9C091 1923 aaPredicted RBP17.09■□□□□ 0.33
SNRNP25-203ENST00000397876 GSG1L2A8MUP6 293 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms