RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 PARP3Q9Y6F1 533 aa6.69□□□□□ -1.34
PTPRD-206ENST00000397617 SH3RF1Q7Z6J0 888 aa6.69□□□□□ -1.34
PTPRD-206ENST00000397617 C7orf43Q8WVR3 580 aa6.69□□□□□ -1.34
PTPRD-206ENST00000397617 PI4KBQ9UBF8 816 aa6.69□□□□□ -1.34
PTPRD-206ENST00000397617 CNPY2Q9Y2B0 182 aa6.69□□□□□ -1.34
PTPRD-206ENST00000397617 NAV1Q8NEY1 1877 aa6.69□□□□□ -1.34
PTPRD-206ENST00000397617 TNS1Q9HBL0 1735 aaKnown RBP6.69□□□□□ -1.34
PTPRD-206ENST00000397617 PSDA5PKW4 1024 aaPredicted RBP6.69□□□□□ -1.34
PTPRD-206ENST00000397617 TSPY2A6NKD2 308 aa6.69□□□□□ -1.34
PTPRD-206ENST00000397617 FIGNQ5HY92 759 aa6.69□□□□□ -1.34
PTPRD-206ENST00000397617 C6orf50Q9HD87 102 aa6.69□□□□□ -1.34
PTPRD-206ENST00000397617 RXRBP28702 533 aa6.69□□□□□ -1.34
PTPRD-206ENST00000397617 ENPEPQ07075 957 aa6.69□□□□□ -1.34
PTPRD-206ENST00000397617 DDR1Q08345 913 aa6.69□□□□□ -1.34
PTPRD-206ENST00000397617 TMEM179Q6ZVK1 233 aa6.69□□□□□ -1.34
PTPRD-206ENST00000397617 FSIP1Q8NA03 581 aa6.69□□□□□ -1.34
PTPRD-206ENST00000397617 TNFRSF25Q93038 417 aa6.69□□□□□ -1.34
PTPRD-206ENST00000397617 MBOAT7Q96N66 472 aa6.69□□□□□ -1.34
PTPRD-206ENST00000397617 SRRTQ9BXP5 876 aaKnown RBP6.69□□□□□ -1.34
PTPRD-206ENST00000397617 BRPF3Q9ULD4 1205 aa6.69□□□□□ -1.34
PTPRD-206ENST00000397617 NSFL1CQ9UNZ2 370 aaKnown RBP6.69□□□□□ -1.34
PTPRD-206ENST00000397617 ATP8B3O60423 1300 aa6.69□□□□□ -1.34
PTPRD-206ENST00000397617 BRWD3Q6RI45 1802 aa6.69□□□□□ -1.34
PTPRD-206ENST00000397617 TGFB2P61812 414 aa6.69□□□□□ -1.34
PTPRD-206ENST00000397617 SNW1Q13573 536 aaKnown RBP6.69□□□□□ -1.34
PTPRD-206ENST00000397617 SLC15A2Q16348 729 aa6.69□□□□□ -1.34
PTPRD-206ENST00000397617 BARHL2Q9NY43 387 aa6.69□□□□□ -1.34
PTPRD-206ENST00000397617 KCNH3Q9ULD8 1083 aa6.69□□□□□ -1.34
PTPRD-206ENST00000397617 B4E1Z4 1266 aa6.69□□□□□ -1.34
PTPRD-206ENST00000397617 FGFR1OPO95684 399 aaKnown RBP6.69□□□□□ -1.34
PTPRD-206ENST00000397617 FAM43BQ6ZT52 329 aaPredicted RBP6.69□□□□□ -1.34
PTPRD-206ENST00000397617 PDCL2Q8N4E4 241 aa6.69□□□□□ -1.34
PTPRD-206ENST00000397617 DCAF4Q8WV16 495 aa6.69□□□□□ -1.34
PTPRD-206ENST00000397617 MCM9Q9NXL9 1143 aa6.69□□□□□ -1.34
PTPRD-206ENST00000397617 KCND2Q9NZV8 630 aa6.69□□□□□ -1.34
PTPRD-206ENST00000397617 CNTNAP5Q8WYK1 1306 aa6.69□□□□□ -1.34
PTPRD-206ENST00000397617 JAK2O60674 1132 aa6.68□□□□□ -1.34
PTPRD-206ENST00000397617 STIM1Q13586 685 aa6.68□□□□□ -1.34
PTPRD-206ENST00000397617 TEX11Q8IYF3 940 aa6.68□□□□□ -1.34
PTPRD-206ENST00000397617 NECAB1Q8N987 351 aa6.68□□□□□ -1.34
PTPRD-206ENST00000397617 NT5C3AQ9H0P0 336 aa6.68□□□□□ -1.34
PTPRD-206ENST00000397617 PVALEFA0A1B0GWK0 134 aa6.68□□□□□ -1.34
PTPRD-206ENST00000397617 ZNF202O95125 648 aa6.68□□□□□ -1.34
PTPRD-206ENST00000397617 KRT2P35908 639 aa6.68□□□□□ -1.34
PTPRD-206ENST00000397617 USP11P51784 963 aa6.68□□□□□ -1.34
PTPRD-206ENST00000397617 RBM26Q5T8P6 1007 aaKnown RBP6.68□□□□□ -1.34
PTPRD-206ENST00000397617 CCAR1Q8IX12 1150 aaKnown RBP6.68□□□□□ -1.34
PTPRD-206ENST00000397617 TMEM174Q8WUU8 243 aa6.68□□□□□ -1.34
PTPRD-206ENST00000397617 H0YIN7 160 aa6.68□□□□□ -1.34
PTPRD-206ENST00000397617 GYG1P46976 350 aa6.68□□□□□ -1.34
PTPRD-206ENST00000397617 KRBA2Q6ZNG9 492 aa6.68□□□□□ -1.34
PTPRD-206ENST00000397617 DPF2Q92785 391 aa6.68□□□□□ -1.34
PTPRD-206ENST00000397617 ACSBG1Q96GR2 724 aa6.68□□□□□ -1.34
PTPRD-206ENST00000397617 NEDD4P46934 1319 aa6.68□□□□□ -1.34
PTPRD-206ENST00000397617 TTLL5Q6EMB2 1281 aa6.68□□□□□ -1.34
PTPRD-206ENST00000397617 VTI1AQ96AJ9 217 aa6.68□□□□□ -1.34
PTPRD-206ENST00000397617 CCDC194A0A1B0GVG4 234 aa6.68□□□□□ -1.34
PTPRD-206ENST00000397617 UFL1O94874 794 aa6.68□□□□□ -1.34
PTPRD-206ENST00000397617 EEF1GP26641 437 aaKnown RBP6.68□□□□□ -1.34
PTPRD-206ENST00000397617 CHAF1AQ13111 956 aaPredicted RBP6.68□□□□□ -1.34
PTPRD-206ENST00000397617 CCDC129Q6ZRS4 1044 aa6.68□□□□□ -1.34
PTPRD-206ENST00000397617 SARSP49591 514 aaKnown RBP6.68□□□□□ -1.34
PTPRD-206ENST00000397617 PIP4K2BP78356 416 aa6.68□□□□□ -1.34
PTPRD-206ENST00000397617 TATDN1Q6P1N9 297 aa6.68□□□□□ -1.34
PTPRD-206ENST00000397617 DPP8Q6V1X1 898 aaPredicted RBP6.68□□□□□ -1.34
PTPRD-206ENST00000397617 REXO1Q8N1G1 1221 aaKnown RBP6.68□□□□□ -1.34
PTPRD-206ENST00000397617 DDX11Q96FC9 970 aa6.68□□□□□ -1.34
PTPRD-206ENST00000397617 PIK3CDO00329 1044 aa6.67□□□□□ -1.34
PTPRD-206ENST00000397617 IRF5Q13568 498 aa6.67□□□□□ -1.34
PTPRD-206ENST00000397617 OLFM4Q6UX06 510 aa6.67□□□□□ -1.34
PTPRD-206ENST00000397617 ZNF384Q8TF68 577 aa6.67□□□□□ -1.34
PTPRD-206ENST00000397617 LPAR1Q92633 364 aa6.67□□□□□ -1.34
PTPRD-206ENST00000397617 LRRC4BQ9NT99 713 aa6.67□□□□□ -1.34
PTPRD-206ENST00000397617 MYO1AQ9UBC5 1043 aa6.67□□□□□ -1.34
PTPRD-206ENST00000397617 PPP2R3BQ9Y5P8 575 aa6.67□□□□□ -1.34
PTPRD-206ENST00000397617 ZNF536O15090 1300 aa6.67□□□□□ -1.34
PTPRD-206ENST00000397617 MYBPC2Q14324 1141 aa6.67□□□□□ -1.34
PTPRD-206ENST00000397617 GMCL1P1Q8NEA9 526 aa6.67□□□□□ -1.34
PTPRD-206ENST00000397617 PGBD1Q96JS3 809 aa6.67□□□□□ -1.34
PTPRD-206ENST00000397617 FLT1P17948 1338 aa6.67□□□□□ -1.34
PTPRD-206ENST00000397617 TTLL1O95922 423 aa6.67□□□□□ -1.34
PTPRD-206ENST00000397617 PSMD2Q13200 908 aa6.67□□□□□ -1.34
PTPRD-206ENST00000397617 CCDC84Q86UT8 332 aaPredicted RBP6.67□□□□□ -1.34
PTPRD-206ENST00000397617 NEK9Q8TD19 979 aa6.67□□□□□ -1.34
PTPRD-206ENST00000397617 PITPNM2Q9BZ72 1349 aa6.67□□□□□ -1.34
PTPRD-206ENST00000397617 PPEF1O14829 653 aaPredicted RBP6.67□□□□□ -1.34
PTPRD-206ENST00000397617 GTPBP6O43824 516 aaPredicted RBP6.67□□□□□ -1.34
PTPRD-206ENST00000397617 PI16Q6UXB8 463 aa6.67□□□□□ -1.34
PTPRD-206ENST00000397617 SLC17A8Q8NDX2 589 aa6.67□□□□□ -1.34
PTPRD-206ENST00000397617 KIAA1524Q8TCG1 905 aa6.67□□□□□ -1.34
PTPRD-206ENST00000397617 NUCKS1Q9H1E3 243 aaKnown RBP6.67□□□□□ -1.34
PTPRD-206ENST00000397617 ARMT1Q9H993 441 aa6.67□□□□□ -1.34
PTPRD-206ENST00000397617 MTMR4Q9NYA4 1195 aa6.67□□□□□ -1.34
PTPRD-206ENST00000397617 PROM2Q8N271 834 aa6.67□□□□□ -1.34
PTPRD-206ENST00000397617 SEC63Q9UGP8 760 aaKnown RBP6.67□□□□□ -1.34
PTPRD-206ENST00000397617 HDAC9Q9UKV0 1011 aa6.67□□□□□ -1.34
PTPRD-206ENST00000397617 RASA1P20936 1047 aa6.67□□□□□ -1.34
PTPRD-206ENST00000397617 PRDX5P30044 214 aa6.67□□□□□ -1.34
PTPRD-206ENST00000397617 USP5P45974 858 aa6.67□□□□□ -1.34
PTPRD-206ENST00000397617 CCDC93Q567U6 631 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms