RNA–Protein interactions for RNA: ENST00000397459.6

CNTN4-201, Transcript of contactin 4, humanhuman

TSL 1 (best) BASIC

Gene CNTN4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN4-201ENST00000397459 IGSF22Q8N9C0 903 aa9.22□□□□□ -0.93
CNTN4-201ENST00000397459 CTCFLQ8NI51 663 aaPredicted RBP9.22□□□□□ -0.93
CNTN4-201ENST00000397459 SMARCC1Q92922 1105 aaPredicted RBP9.22□□□□□ -0.93
CNTN4-201ENST00000397459 GNL3LQ9NVN8 582 aaKnown RBP9.22□□□□□ -0.93
CNTN4-201ENST00000397459 RWDD2AQ9UIY3 292 aa9.22□□□□□ -0.93
CNTN4-201ENST00000397459 GSG1L2A8MUP6 293 aa9.22□□□□□ -0.93
CNTN4-201ENST00000397459 TMEM232C9JQI7 657 aa9.22□□□□□ -0.93
CNTN4-201ENST00000397459 TULP2O00295 520 aa9.22□□□□□ -0.93
CNTN4-201ENST00000397459 RPS6KA5O75582 802 aa9.22□□□□□ -0.93
CNTN4-201ENST00000397459 MBD4O95243 580 aa9.22□□□□□ -0.93
CNTN4-201ENST00000397459 BMP6P22004 513 aa9.22□□□□□ -0.93
CNTN4-201ENST00000397459 PDE4BQ07343 736 aa9.22□□□□□ -0.93
CNTN4-201ENST00000397459 CCDC178Q5BJE1 867 aa9.22□□□□□ -0.93
CNTN4-201ENST00000397459 IQCEQ6IPM2 695 aa9.22□□□□□ -0.93
CNTN4-201ENST00000397459 CATIPQ7Z7H3 387 aa9.22□□□□□ -0.93
CNTN4-201ENST00000397459 GOLGA5Q8TBA6 731 aa9.22□□□□□ -0.93
CNTN4-201ENST00000397459 CCDC85AQ96PX6 553 aaPredicted RBP9.22□□□□□ -0.93
CNTN4-201ENST00000397459 NAPGQ99747 312 aaPredicted RBP9.22□□□□□ -0.93
CNTN4-201ENST00000397459 FUT8Q9BYC5 575 aa9.22□□□□□ -0.93
CNTN4-201ENST00000397459 PARD6BQ9BYG5 372 aa9.22□□□□□ -0.93
CNTN4-201ENST00000397459 GREM2Q9H772 168 aa9.22□□□□□ -0.93
CNTN4-201ENST00000397459 MED4Q9NPJ6 270 aa9.22□□□□□ -0.93
CNTN4-201ENST00000397459 TMEM51Q9NW97 253 aa9.22□□□□□ -0.93
CNTN4-201ENST00000397459 MYO5AQ9Y4I1 1855 aaKnown RBP9.21□□□□□ -0.93
CNTN4-201ENST00000397459 DLEC1Q9Y238 1755 aa9.21□□□□□ -0.93
CNTN4-201ENST00000397459 PDS5AQ29RF7 1337 aaKnown RBP9.21□□□□□ -0.93
CNTN4-201ENST00000397459 A0A1W2PQC6 194 aa9.21□□□□□ -0.93
CNTN4-201ENST00000397459 GTPBP6O43824 516 aaPredicted RBP9.21□□□□□ -0.93
CNTN4-201ENST00000397459 CALML3P27482 149 aa9.21□□□□□ -0.93
CNTN4-201ENST00000397459 OAS2P29728 719 aaKnown RBP9.21□□□□□ -0.93
CNTN4-201ENST00000397459 CKAP4Q07065 602 aaKnown RBP9.21□□□□□ -0.93
CNTN4-201ENST00000397459 DPYDQ12882 1025 aa9.21□□□□□ -0.93
CNTN4-201ENST00000397459 LONRF2Q1L5Z9 754 aa9.21□□□□□ -0.93
CNTN4-201ENST00000397459 IQCA1Q86XH1 822 aa9.21□□□□□ -0.93
CNTN4-201ENST00000397459 ZNF34Q8IZ26 560 aa9.21□□□□□ -0.93
CNTN4-201ENST00000397459 RETREG2Q8NC44 543 aa9.21□□□□□ -0.93
CNTN4-201ENST00000397459 AIFM3Q96NN9 605 aa9.21□□□□□ -0.93
CNTN4-201ENST00000397459 PHF20Q9BVI0 1012 aa9.21□□□□□ -0.93
CNTN4-201ENST00000397459 BRIP1Q9BX63 1249 aa9.21□□□□□ -0.93
CNTN4-201ENST00000397459 EPB41L4AQ9HCS5 686 aaPredicted RBP9.21□□□□□ -0.93
CNTN4-201ENST00000397459 ZNHIT6Q9NWK9 470 aaKnown RBP9.21□□□□□ -0.93
CNTN4-201ENST00000397459 TRMT112Q9UI30 125 aaKnown RBP9.21□□□□□ -0.93
CNTN4-201ENST00000397459 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.21□□□□□ -0.94
CNTN4-201ENST00000397459 CTAGE15A4D2H0 777 aa9.21□□□□□ -0.94
CNTN4-201ENST00000397459 H7C1D1 291 aa9.21□□□□□ -0.94
CNTN4-201ENST00000397459 FGRP09769 529 aa9.21□□□□□ -0.94
CNTN4-201ENST00000397459 CTAGE8P0CG41 777 aa9.21□□□□□ -0.94
CNTN4-201ENST00000397459 PHKA1P46020 1223 aa9.21□□□□□ -0.94
CNTN4-201ENST00000397459 PPARAQ07869 468 aa9.21□□□□□ -0.94
CNTN4-201ENST00000397459 TSR1Q2NL82 804 aaKnown RBP9.21□□□□□ -0.94
CNTN4-201ENST00000397459 CCDC152Q4G0S7 254 aa9.21□□□□□ -0.94
CNTN4-201ENST00000397459 HSP90B2PQ58FF3 399 aa9.21□□□□□ -0.94
CNTN4-201ENST00000397459 MEX3CQ5U5Q3 659 aaKnown RBP9.21□□□□□ -0.94
CNTN4-201ENST00000397459 GALNT17Q6IS24 598 aa9.21□□□□□ -0.94
CNTN4-201ENST00000397459 WDR93Q6P2C0 686 aa9.21□□□□□ -0.94
CNTN4-201ENST00000397459 CTAGE6Q86UF2 777 aa9.21□□□□□ -0.94
CNTN4-201ENST00000397459 CTAGE4Q8IX94 777 aa9.21□□□□□ -0.94
CNTN4-201ENST00000397459 MAGEB6Q8N7X4 407 aa9.21□□□□□ -0.94
CNTN4-201ENST00000397459 CCDC148Q8NFR7 591 aa9.21□□□□□ -0.94
CNTN4-201ENST00000397459 WDR24Q96S15 920 aa9.21□□□□□ -0.94
CNTN4-201ENST00000397459 CSRNP2Q9H175 543 aa9.21□□□□□ -0.94
CNTN4-201ENST00000397459 CUEDC2Q9H467 287 aa9.21□□□□□ -0.94
CNTN4-201ENST00000397459 HAUS4Q9H6D7 363 aa9.21□□□□□ -0.94
CNTN4-201ENST00000397459 SH3GLB2Q9NR46 395 aa9.21□□□□□ -0.94
CNTN4-201ENST00000397459 SLC4A4Q9Y6R1 1079 aa9.21□□□□□ -0.94
CNTN4-201ENST00000397459 CAMTA2O94983 1202 aa9.2□□□□□ -0.94
CNTN4-201ENST00000397459 EEF1GP26641 437 aaKnown RBP9.2□□□□□ -0.94
CNTN4-201ENST00000397459 LONP1P36776 959 aaKnown RBP9.2□□□□□ -0.94
CNTN4-201ENST00000397459 IGHMBP2P38935 993 aaKnown RBP9.2□□□□□ -0.94
CNTN4-201ENST00000397459 KCNQ4P56696 695 aa9.2□□□□□ -0.94
CNTN4-201ENST00000397459 ATP2C1P98194 919 aaPredicted RBP9.2□□□□□ -0.94
CNTN4-201ENST00000397459 FMR1Q06787 632 aaKnown RBP eCLIP9.2□□□□□ -0.94
CNTN4-201ENST00000397459 STIM1Q13586 685 aa9.2□□□□□ -0.94
CNTN4-201ENST00000397459 SEC23AQ15436 765 aa9.2□□□□□ -0.94
CNTN4-201ENST00000397459 FAM182BQ5T319 152 aa9.2□□□□□ -0.94
CNTN4-201ENST00000397459 TOGARAM2Q6ZUX3 1019 aa9.2□□□□□ -0.94
CNTN4-201ENST00000397459 APTXQ7Z2E3 356 aaKnown RBP9.2□□□□□ -0.94
CNTN4-201ENST00000397459 FAM71BQ8TC56 605 aa9.2□□□□□ -0.94
CNTN4-201ENST00000397459 CCDC47Q96A33 483 aaKnown RBP9.2□□□□□ -0.94
CNTN4-201ENST00000397459 DHX58Q96C10 678 aa9.2□□□□□ -0.94
CNTN4-201ENST00000397459 PAGE5Q96GU1 130 aa9.2□□□□□ -0.94
CNTN4-201ENST00000397459 NUP58Q9BVL2 599 aa9.2□□□□□ -0.94
CNTN4-201ENST00000397459 GJB4Q9NTQ9 266 aa9.2□□□□□ -0.94
CNTN4-201ENST00000397459 MKRN1Q9UHC7 482 aaKnown RBP9.2□□□□□ -0.94
CNTN4-201ENST00000397459 THSD7AQ9UPZ6 1657 aa9.2□□□□□ -0.94
CNTN4-201ENST00000397459 MYH6P13533 1939 aa9.2□□□□□ -0.94
CNTN4-201ENST00000397459 TARSL2A2RTX5 802 aaKnown RBP9.2□□□□□ -0.94
CNTN4-201ENST00000397459 A6NNZ2 444 aa9.2□□□□□ -0.94
CNTN4-201ENST00000397459 LAD1O00515 517 aa9.2□□□□□ -0.94
CNTN4-201ENST00000397459 NPHP1O15259 732 aa9.2□□□□□ -0.94
CNTN4-201ENST00000397459 KRT83P78385 493 aa9.2□□□□□ -0.94
CNTN4-201ENST00000397459 KCNB1Q14721 858 aa9.2□□□□□ -0.94
CNTN4-201ENST00000397459 KIF4BQ2VIQ3 1234 aa9.2□□□□□ -0.94
CNTN4-201ENST00000397459 TUBB8Q3ZCM7 444 aa9.2□□□□□ -0.94
CNTN4-201ENST00000397459 ISM2Q6H9L7 571 aa9.2□□□□□ -0.94
CNTN4-201ENST00000397459 LEKR1Q6ZMV7 388 aa9.2□□□□□ -0.94
CNTN4-201ENST00000397459 LINC00116Q8NCU8 138 aa9.2□□□□□ -0.94
CNTN4-201ENST00000397459 GJD4Q96KN9 370 aaPredicted RBP9.2□□□□□ -0.94
CNTN4-201ENST00000397459 KCNG1Q9UIX4 513 aa9.2□□□□□ -0.94
CNTN4-201ENST00000397459 PCDHB6Q9Y5E3 794 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms