RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 MED4Q9NPJ6 270 aa10.35□□□□□ -0.75
CAPN3-206ENST00000397163 MKRN1Q9UHC7 482 aaKnown RBP10.35□□□□□ -0.75
CAPN3-206ENST00000397163 CTNND2Q9UQB3 1225 aa10.35□□□□□ -0.75
CAPN3-206ENST00000397163 ERICH2A1L162 156 aa10.34□□□□□ -0.75
CAPN3-206ENST00000397163 TRIM75PA6NK02 468 aa10.34□□□□□ -0.75
CAPN3-206ENST00000397163 ERLIN2O94905 339 aa10.34□□□□□ -0.75
CAPN3-206ENST00000397163 SCP2P22307 547 aa10.34□□□□□ -0.75
CAPN3-206ENST00000397163 WTAPQ15007 396 aa10.34□□□□□ -0.75
CAPN3-206ENST00000397163 TTC19Q6DKK2 380 aaPredicted RBP10.34□□□□□ -0.75
CAPN3-206ENST00000397163 CYP26C1Q6V0L0 522 aa10.34□□□□□ -0.75
CAPN3-206ENST00000397163 STAMQ92783 540 aa10.34□□□□□ -0.75
CAPN3-206ENST00000397163 STRBPQ96SI9 672 aaKnown RBP10.34□□□□□ -0.75
CAPN3-206ENST00000397163 GUCA1BQ9UMX6 200 aa10.34□□□□□ -0.75
CAPN3-206ENST00000397163 A0A087X0B3 334 aa10.34□□□□□ -0.75
CAPN3-206ENST00000397163 RPS6KA5O75582 802 aa10.34□□□□□ -0.75
CAPN3-206ENST00000397163 CCT5P48643 541 aa10.34□□□□□ -0.75
CAPN3-206ENST00000397163 MFSD6Q6ZSS7 791 aa10.34□□□□□ -0.75
CAPN3-206ENST00000397163 IFNL3Q8IZI9 196 aa10.34□□□□□ -0.75
CAPN3-206ENST00000397163 ISCA1Q9BUE6 129 aa10.34□□□□□ -0.75
CAPN3-206ENST00000397163 STRN4Q9NRL3 753 aa10.34□□□□□ -0.75
CAPN3-206ENST00000397163 ABHD10Q9NUJ1 306 aa10.34□□□□□ -0.75
CAPN3-206ENST00000397163 ALS2Q96Q42 1657 aa10.34□□□□□ -0.75
CAPN3-206ENST00000397163 SCN11AQ9UI33 1791 aa10.34□□□□□ -0.75
CAPN3-206ENST00000397163 CCDC196A0A1B0GTZ2 297 aa10.33□□□□□ -0.76
CAPN3-206ENST00000397163 KRT9P35527 623 aa10.33□□□□□ -0.76
CAPN3-206ENST00000397163 ARHGAP25P42331 645 aa10.33□□□□□ -0.76
CAPN3-206ENST00000397163 TDO2P48775 406 aa10.33□□□□□ -0.76
CAPN3-206ENST00000397163 TCIRG1Q13488 830 aa10.33□□□□□ -0.76
CAPN3-206ENST00000397163 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.33□□□□□ -0.76
CAPN3-206ENST00000397163 EFCAB13Q8IY85 973 aa10.33□□□□□ -0.76
CAPN3-206ENST00000397163 CRACR2BQ8N4Y2 399 aaPredicted RBP10.33□□□□□ -0.76
CAPN3-206ENST00000397163 SYMPKQ92797 1274 aaKnown RBP10.33□□□□□ -0.76
CAPN3-206ENST00000397163 DDX17Q92841 729 aaKnown RBP10.33□□□□□ -0.76
CAPN3-206ENST00000397163 KRT23Q9C075 422 aa10.33□□□□□ -0.76
CAPN3-206ENST00000397163 CNNM2Q9H8M5 875 aa10.33□□□□□ -0.76
CAPN3-206ENST00000397163 AATFQ9NY61 560 aaKnown RBP eCLIP10.33□□□□□ -0.76
CAPN3-206ENST00000397163 TAB2Q9NYJ8 693 aa10.33□□□□□ -0.76
CAPN3-206ENST00000397163 MYO1AQ9UBC5 1043 aa10.33□□□□□ -0.76
CAPN3-206ENST00000397163 FAM205CA6NFA0 338 aa10.33□□□□□ -0.76
CAPN3-206ENST00000397163 PPP1R3GB7ZBB8 358 aa10.33□□□□□ -0.76
CAPN3-206ENST00000397163 SEMA3EO15041 775 aa10.33□□□□□ -0.76
CAPN3-206ENST00000397163 RNF40O75150 1001 aa10.33□□□□□ -0.76
CAPN3-206ENST00000397163 MBD4O95243 580 aa10.33□□□□□ -0.76
CAPN3-206ENST00000397163 KRT31Q15323 416 aa10.33□□□□□ -0.76
CAPN3-206ENST00000397163 AKNAD1Q5T1N1 836 aa10.33□□□□□ -0.76
CAPN3-206ENST00000397163 AFAP1L1Q8TED9 768 aa10.33□□□□□ -0.76
CAPN3-206ENST00000397163 GSDMAQ96QA5 445 aa10.33□□□□□ -0.76
CAPN3-206ENST00000397163 JPH2Q9BR39 696 aaPredicted RBP10.33□□□□□ -0.76
CAPN3-206ENST00000397163 EPB41L4AQ9HCS5 686 aaPredicted RBP10.33□□□□□ -0.76
CAPN3-206ENST00000397163 ATP6V1AP38606 617 aa10.33□□□□□ -0.76
CAPN3-206ENST00000397163 PHKA1P46020 1223 aa10.33□□□□□ -0.76
CAPN3-206ENST00000397163 RRAGBQ5VZM2 374 aa10.33□□□□□ -0.76
CAPN3-206ENST00000397163 KCNV1Q6PIU1 500 aa10.33□□□□□ -0.76
CAPN3-206ENST00000397163 CABLES1Q8TDN4 633 aa10.33□□□□□ -0.76
CAPN3-206ENST00000397163 RIPOR2Q9Y4F9 1068 aa10.33□□□□□ -0.76
CAPN3-206ENST00000397163 ROBO1Q9Y6N7 1651 aa10.33□□□□□ -0.76
CAPN3-206ENST00000397163 CAMTA1Q9Y6Y1 1673 aa10.33□□□□□ -0.76
CAPN3-206ENST00000397163 ITIH6Q6UXX5 1313 aa10.32□□□□□ -0.76
CAPN3-206ENST00000397163 ENC1O14682 589 aa10.32□□□□□ -0.76
CAPN3-206ENST00000397163 ITGA6P23229 1130 aa10.32□□□□□ -0.76
CAPN3-206ENST00000397163 HNRNPH1P31943 449 aaKnown RBP10.32□□□□□ -0.76
CAPN3-206ENST00000397163 ATP2B2Q01814 1243 aa10.32□□□□□ -0.76
CAPN3-206ENST00000397163 MAP9Q49MG5 647 aa10.32□□□□□ -0.76
CAPN3-206ENST00000397163 SUGP1Q8IWZ8 645 aaKnown RBP10.32□□□□□ -0.76
CAPN3-206ENST00000397163 SYNE4Q8N205 404 aa10.32□□□□□ -0.76
CAPN3-206ENST00000397163 BLZF1Q9H2G9 400 aa10.32□□□□□ -0.76
CAPN3-206ENST00000397163 ARMT1Q9H993 441 aa10.32□□□□□ -0.76
CAPN3-206ENST00000397163 DONSONQ9NYP3 566 aa10.32□□□□□ -0.76
CAPN3-206ENST00000397163 TRIM10Q9UDY6 481 aa10.32□□□□□ -0.76
CAPN3-206ENST00000397163 SOS2Q07890 1332 aaPredicted RBP10.32□□□□□ -0.76
CAPN3-206ENST00000397163 RNF225M0QZC1 329 aaPredicted RBP10.32□□□□□ -0.76
CAPN3-206ENST00000397163 EXOC5O00471 708 aa10.32□□□□□ -0.76
CAPN3-206ENST00000397163 PES1O00541 588 aaKnown RBP10.32□□□□□ -0.76
CAPN3-206ENST00000397163 PCCAP05165 728 aaPredicted RBP10.32□□□□□ -0.76
CAPN3-206ENST00000397163 XBP1P17861 261 aa10.32□□□□□ -0.76
CAPN3-206ENST00000397163 COPB1P53618 953 aaKnown RBP10.32□□□□□ -0.76
CAPN3-206ENST00000397163 DPYDQ12882 1025 aa10.32□□□□□ -0.76
CAPN3-206ENST00000397163 PPP2R5AQ15172 486 aa10.32□□□□□ -0.76
CAPN3-206ENST00000397163 ALX1Q15699 326 aa10.32□□□□□ -0.76
CAPN3-206ENST00000397163 WDR93Q6P2C0 686 aa10.32□□□□□ -0.76
CAPN3-206ENST00000397163 GSPT2Q8IYD1 628 aaKnown RBP10.32□□□□□ -0.76
CAPN3-206ENST00000397163 MAGEB6Q8N7X4 407 aa10.32□□□□□ -0.76
CAPN3-206ENST00000397163 ZNF622Q969S3 477 aaKnown RBP eCLIP10.32□□□□□ -0.76
CAPN3-206ENST00000397163 VPS54Q9P1Q0 977 aa10.32□□□□□ -0.76
CAPN3-206ENST00000397163 WDR17Q8IZU2 1322 aa10.32□□□□□ -0.76
CAPN3-206ENST00000397163 AMPD2Q01433 879 aa10.31□□□□□ -0.76
CAPN3-206ENST00000397163 SH3RF1Q7Z6J0 888 aa10.31□□□□□ -0.76
CAPN3-206ENST00000397163 FANCBQ8NB91 859 aa10.31□□□□□ -0.76
CAPN3-206ENST00000397163 CTCFLQ8NI51 663 aaPredicted RBP10.31□□□□□ -0.76
CAPN3-206ENST00000397163 SMARCC1Q92922 1105 aaPredicted RBP10.31□□□□□ -0.76
CAPN3-206ENST00000397163 CHP1Q99653 195 aa10.31□□□□□ -0.76
CAPN3-206ENST00000397163 GREM2Q9H772 168 aa10.31□□□□□ -0.76
CAPN3-206ENST00000397163 POLD4Q9HCU8 107 aa10.31□□□□□ -0.76
CAPN3-206ENST00000397163 HDAC6Q9UBN7 1215 aa10.31□□□□□ -0.76
CAPN3-206ENST00000397163 SAMM50Q9Y512 469 aa10.31□□□□□ -0.76
CAPN3-206ENST00000397163 TACC3Q9Y6A5 838 aa10.31□□□□□ -0.76
CAPN3-206ENST00000397163 EPN1Q9Y6I3 576 aaPredicted RBP10.31□□□□□ -0.76
CAPN3-206ENST00000397163 AHDC1Q5TGY3 1603 aaPredicted RBP10.31□□□□□ -0.76
CAPN3-206ENST00000397163 ANKRD18BA2A2Z9 1011 aa10.31□□□□□ -0.76
CAPN3-206ENST00000397163 PPFIA4O75335 1185 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms