RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 FAM89AQ96GI7 184 aa11.12□□□□□ -0.63
TRIM39-203ENST00000396547 PANX2Q96RD6 677 aa11.12□□□□□ -0.63
TRIM39-203ENST00000396547 A0A1B0GTH6 734 aa11.12□□□□□ -0.63
TRIM39-203ENST00000396547 SH2B2O14492 632 aaPredicted RBP11.12□□□□□ -0.63
TRIM39-203ENST00000396547 GYPCP04921 128 aa11.12□□□□□ -0.63
TRIM39-203ENST00000396547 ERVK-24P63145 666 aa11.12□□□□□ -0.63
TRIM39-203ENST00000396547 RRAGBQ5VZM2 374 aa11.12□□□□□ -0.63
TRIM39-203ENST00000396547 SYNE4Q8N205 404 aa11.12□□□□□ -0.63
TRIM39-203ENST00000396547 HNRNPLLQ8WVV9 542 aaKnown RBP11.12□□□□□ -0.63
TRIM39-203ENST00000396547 FBXO2Q9UK22 296 aaPredicted RBP11.12□□□□□ -0.63
TRIM39-203ENST00000396547 RAB21Q9UL25 225 aa11.12□□□□□ -0.63
TRIM39-203ENST00000396547 TULP1O00294 542 aaPredicted RBP11.11□□□□□ -0.63
TRIM39-203ENST00000396547 METTL24Q5JXM2 366 aa11.11□□□□□ -0.63
TRIM39-203ENST00000396547 MSANTD4Q8NCY6 345 aa11.11□□□□□ -0.63
TRIM39-203ENST00000396547 HELBQ8NG08 1087 aaPredicted RBP11.11□□□□□ -0.63
TRIM39-203ENST00000396547 PLBD2Q8NHP8 589 aa11.11□□□□□ -0.63
TRIM39-203ENST00000396547 PPM1EQ8WY54 764 aa11.11□□□□□ -0.63
TRIM39-203ENST00000396547 PSMB7Q99436 277 aa11.11□□□□□ -0.63
TRIM39-203ENST00000396547 NBPF3Q9H094 633 aa11.11□□□□□ -0.63
TRIM39-203ENST00000396547 WWC3Q9ULE0 1092 aa11.11□□□□□ -0.63
TRIM39-203ENST00000396547 SAMM50Q9Y512 469 aa11.11□□□□□ -0.63
TRIM39-203ENST00000396547 UBR3Q6ZT12 1888 aa11.11□□□□□ -0.63
TRIM39-203ENST00000396547 PRDM1O75626 825 aa11.11□□□□□ -0.63
TRIM39-203ENST00000396547 GGCXP38435 758 aa11.11□□□□□ -0.63
TRIM39-203ENST00000396547 STIM1Q13586 685 aa11.11□□□□□ -0.63
TRIM39-203ENST00000396547 ZNF174Q15697 407 aa11.11□□□□□ -0.63
TRIM39-203ENST00000396547 SPATA1Q5VX52 437 aa11.11□□□□□ -0.63
TRIM39-203ENST00000396547 TRIM22Q8IYM9 498 aa11.11□□□□□ -0.63
TRIM39-203ENST00000396547 MMS19Q96T76 1030 aa11.11□□□□□ -0.63
TRIM39-203ENST00000396547 ZNF185O15231 689 aa11.1□□□□□ -0.63
TRIM39-203ENST00000396547 PTPREP23469 700 aa11.1□□□□□ -0.63
TRIM39-203ENST00000396547 CASP7P55210 303 aa11.1□□□□□ -0.63
TRIM39-203ENST00000396547 SLC27A3Q5K4L6 730 aa11.1□□□□□ -0.63
TRIM39-203ENST00000396547 RASGRP2Q7LDG7 609 aa11.1□□□□□ -0.63
TRIM39-203ENST00000396547 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.1□□□□□ -0.63
TRIM39-203ENST00000396547 ZSWIM5Q9P217 1185 aa11.1□□□□□ -0.63
TRIM39-203ENST00000396547 ADD3Q9UEY8 706 aaKnown RBP11.1□□□□□ -0.63
TRIM39-203ENST00000396547 MKRN1Q9UHC7 482 aaKnown RBP11.1□□□□□ -0.63
TRIM39-203ENST00000396547 KDM6AO15550 1401 aaPredicted RBP11.1□□□□□ -0.63
TRIM39-203ENST00000396547 RFX7Q2KHR2 1363 aa11.1□□□□□ -0.63
TRIM39-203ENST00000396547 A0A087X0B3 334 aa11.1□□□□□ -0.63
TRIM39-203ENST00000396547 ERVV-2B6SEH9 535 aa11.1□□□□□ -0.63
TRIM39-203ENST00000396547 H7C1W4 665 aa11.1□□□□□ -0.63
TRIM39-203ENST00000396547 USP5P45974 858 aa11.1□□□□□ -0.63
TRIM39-203ENST00000396547 MNAT1P51948 309 aa11.1□□□□□ -0.63
TRIM39-203ENST00000396547 CORO7P57737 925 aa11.1□□□□□ -0.63
TRIM39-203ENST00000396547 UBXN1Q04323 297 aa11.1□□□□□ -0.63
TRIM39-203ENST00000396547 KIAA1328Q86T90 577 aa11.1□□□□□ -0.63
TRIM39-203ENST00000396547 CNGA4Q8IV77 575 aa11.1□□□□□ -0.63
TRIM39-203ENST00000396547 AIDAQ96BJ3 306 aa11.1□□□□□ -0.63
TRIM39-203ENST00000396547 PCMTD1Q96MG8 357 aaPredicted RBP11.1□□□□□ -0.63
TRIM39-203ENST00000396547 FAM217BQ9NTX9 383 aaPredicted RBP11.1□□□□□ -0.63
TRIM39-203ENST00000396547 GNL3LQ9NVN8 582 aaKnown RBP11.1□□□□□ -0.63
TRIM39-203ENST00000396547 TTF2Q9UNY4 1162 aaKnown RBP11.1□□□□□ -0.63
TRIM39-203ENST00000396547 HEG1Q9ULI3 1381 aa11.1□□□□□ -0.63
TRIM39-203ENST00000396547 NBPF26B4DH59 902 aa11.1□□□□□ -0.63
TRIM39-203ENST00000396547 ZFYP08048 801 aaPredicted RBP11.1□□□□□ -0.63
TRIM39-203ENST00000396547 SF3B2Q13435 895 aaKnown RBP11.1□□□□□ -0.63
TRIM39-203ENST00000396547 CCDC122Q5T0U0 273 aa11.1□□□□□ -0.63
TRIM39-203ENST00000396547 NBPF14Q5TI25 921 aa11.1□□□□□ -0.63
TRIM39-203ENST00000396547 NBPF10Q6P3W6 841 aaKnown RBP11.1□□□□□ -0.63
TRIM39-203ENST00000396547 NBPF15Q8N660 670 aa11.1□□□□□ -0.63
TRIM39-203ENST00000396547 IQUBQ8NA54 791 aa11.1□□□□□ -0.63
TRIM39-203ENST00000396547 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.1□□□□□ -0.63
TRIM39-203ENST00000396547 JADE2Q9NQC1 790 aa11.1□□□□□ -0.63
TRIM39-203ENST00000396547 VPS54Q9P1Q0 977 aa11.1□□□□□ -0.63
TRIM39-203ENST00000396547 C4BP0C0L5 1744 aa11.09□□□□□ -0.63
TRIM39-203ENST00000396547 MACROD2A1Z1Q3 448 aa11.09□□□□□ -0.63
TRIM39-203ENST00000396547 SNAP23O00161 211 aa11.09□□□□□ -0.63
TRIM39-203ENST00000396547 CYP27B1O15528 508 aa11.09□□□□□ -0.63
TRIM39-203ENST00000396547 MYO1BO43795 1136 aa11.09□□□□□ -0.63
TRIM39-203ENST00000396547 PPFIA4O75335 1185 aa11.09□□□□□ -0.63
TRIM39-203ENST00000396547 SYF2O95926 243 aaKnown RBP11.09□□□□□ -0.63
TRIM39-203ENST00000396547 ATP1A1P05023 1023 aaKnown RBP11.09□□□□□ -0.63
TRIM39-203ENST00000396547 NTRK3Q16288 839 aa11.09□□□□□ -0.63
TRIM39-203ENST00000396547 WHAMMP3Q1A5X7 153 aa11.09□□□□□ -0.63
TRIM39-203ENST00000396547 FBXW10Q5XX13 1052 aa11.09□□□□□ -0.63
TRIM39-203ENST00000396547 NAPBQ9H115 298 aa11.09□□□□□ -0.63
TRIM39-203ENST00000396547 ZNF532Q9HCE3 1301 aa11.09□□□□□ -0.63
TRIM39-203ENST00000396547 ACTN4O43707 911 aaKnown RBP11.09□□□□□ -0.63
TRIM39-203ENST00000396547 PHKG2P15735 406 aa11.09□□□□□ -0.63
TRIM39-203ENST00000396547 GPTP24298 496 aa11.09□□□□□ -0.63
TRIM39-203ENST00000396547 DPYDQ12882 1025 aa11.09□□□□□ -0.63
TRIM39-203ENST00000396547 KRT31Q15323 416 aa11.09□□□□□ -0.63
TRIM39-203ENST00000396547 RTN1Q16799 776 aa11.09□□□□□ -0.63
TRIM39-203ENST00000396547 TSR1Q2NL82 804 aaKnown RBP11.09□□□□□ -0.63
TRIM39-203ENST00000396547 TMTC1Q8IUR5 882 aa11.09□□□□□ -0.63
TRIM39-203ENST00000396547 SYMPKQ92797 1274 aaKnown RBP11.09□□□□□ -0.63
TRIM39-203ENST00000396547 LY9Q9HBG7 655 aa11.09□□□□□ -0.63
TRIM39-203ENST00000396547 LAMA4Q16363 1823 aa11.09□□□□□ -0.63
TRIM39-203ENST00000396547 MMP1P03956 469 aa11.08□□□□□ -0.64
TRIM39-203ENST00000396547 MYBL2P10244 700 aa11.08□□□□□ -0.64
TRIM39-203ENST00000396547 MCAMP43121 646 aa11.08□□□□□ -0.64
TRIM39-203ENST00000396547 SARSP49591 514 aaKnown RBP11.08□□□□□ -0.64
TRIM39-203ENST00000396547 DNA2P51530 1060 aa11.08□□□□□ -0.64
TRIM39-203ENST00000396547 CYP26C1Q6V0L0 522 aa11.08□□□□□ -0.64
TRIM39-203ENST00000396547 LDHAL6AQ6ZMR3 332 aa11.08□□□□□ -0.64
TRIM39-203ENST00000396547 IGDCC4Q8TDY8 1250 aa11.08□□□□□ -0.64
TRIM39-203ENST00000396547 PAGE5Q96GU1 130 aa11.08□□□□□ -0.64
TRIM39-203ENST00000396547 PLIN2Q99541 437 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms