RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 NEK4P51957 841 aa20.64■□□□□ 0.9
TNFSF13-205ENST00000396545 TRIM32Q13049 653 aa20.64■□□□□ 0.9
TNFSF13-205ENST00000396545 USP17L2Q6R6M4 530 aa20.64■□□□□ 0.9
TNFSF13-205ENST00000396545 POTEEQ6S8J3 1075 aa20.64■□□□□ 0.9
TNFSF13-205ENST00000396545 TRIB2Q92519 343 aa20.64■□□□□ 0.9
TNFSF13-205ENST00000396545 EDC3Q96F86 508 aaKnown RBP20.64■□□□□ 0.9
TNFSF13-205ENST00000396545 FAM227BQ96M60 508 aa20.64■□□□□ 0.9
TNFSF13-205ENST00000396545 RIOK1Q9BRS2 568 aaKnown RBP20.64■□□□□ 0.9
TNFSF13-205ENST00000396545 CCDC171Q6TFL3 1326 aa20.64■□□□□ 0.89
TNFSF13-205ENST00000396545 RPTORQ8N122 1335 aa20.64■□□□□ 0.89
TNFSF13-205ENST00000396545 HSP90AA1P07900 732 aaKnown RBP20.63■□□□□ 0.89
TNFSF13-205ENST00000396545 GTF3C2Q8WUA4 911 aaPredicted RBP20.63■□□□□ 0.89
TNFSF13-205ENST00000396545 SOCS4Q8WXH5 440 aa20.63■□□□□ 0.89
TNFSF13-205ENST00000396545 PAWRQ96IZ0 340 aaKnown RBP20.63■□□□□ 0.89
TNFSF13-205ENST00000396545 C12orf42Q96LP6 360 aa20.63■□□□□ 0.89
TNFSF13-205ENST00000396545 SNX14Q9Y5W7 946 aa20.63■□□□□ 0.89
TNFSF13-205ENST00000396545 RNF113AO15541 343 aaKnown RBP20.63■□□□□ 0.89
TNFSF13-205ENST00000396545 ERVK-9P63128 1117 aa20.63■□□□□ 0.89
TNFSF13-205ENST00000396545 ERVK-24P63145 666 aa20.63■□□□□ 0.89
TNFSF13-205ENST00000396545 PTH1RQ03431 593 aa20.63■□□□□ 0.89
TNFSF13-205ENST00000396545 MCMDC2Q4G0Z9 681 aa20.63■□□□□ 0.89
TNFSF13-205ENST00000396545 TTC6Q86TZ1 520 aa20.63■□□□□ 0.89
TNFSF13-205ENST00000396545 DIS3LQ8TF46 1054 aaKnown RBP20.63■□□□□ 0.89
TNFSF13-205ENST00000396545 HMX1Q9NP08 348 aaPredicted RBP20.63■□□□□ 0.89
TNFSF13-205ENST00000396545 A0A0D9SFI3 127 aa20.62■□□□□ 0.89
TNFSF13-205ENST00000396545 EVI5O60447 810 aa20.62■□□□□ 0.89
TNFSF13-205ENST00000396545 XRCC5P13010 732 aaKnown RBP20.62■□□□□ 0.89
TNFSF13-205ENST00000396545 CYP2B6P20813 491 aa20.62■□□□□ 0.89
TNFSF13-205ENST00000396545 MAPK4P31152 587 aa20.62■□□□□ 0.89
TNFSF13-205ENST00000396545 RAB3GAP1Q15042 981 aa20.62■□□□□ 0.89
TNFSF13-205ENST00000396545 MAP3K21Q5TCX8 1036 aa20.62■□□□□ 0.89
TNFSF13-205ENST00000396545 ANKLE1Q8NAG6 615 aa20.62■□□□□ 0.89
TNFSF13-205ENST00000396545 NUDT12Q9BQG2 462 aa20.62■□□□□ 0.89
TNFSF13-205ENST00000396545 ALPK3Q96L96 1907 aa20.61■□□□□ 0.89
TNFSF13-205ENST00000396545 Q3C1V9 767 aa20.61■□□□□ 0.89
TNFSF13-205ENST00000396545 ZMYM1Q5SVZ6 1142 aa20.61■□□□□ 0.89
TNFSF13-205ENST00000396545 NECAB2Q7Z6G3 386 aa20.61■□□□□ 0.89
TNFSF13-205ENST00000396545 USP6NLQ92738 828 aa20.61■□□□□ 0.89
TNFSF13-205ENST00000396545 MAP4K1Q92918 833 aa20.61■□□□□ 0.89
TNFSF13-205ENST00000396545 FEZ1Q99689 392 aa20.61■□□□□ 0.89
TNFSF13-205ENST00000396545 PORCNQ9H237 461 aa20.61■□□□□ 0.89
TNFSF13-205ENST00000396545 SHMT1P34896 483 aa20.6■□□□□ 0.89
TNFSF13-205ENST00000396545 PLCD1P51178 756 aa20.6■□□□□ 0.89
TNFSF13-205ENST00000396545 NECTIN1Q15223 517 aa20.6■□□□□ 0.89
TNFSF13-205ENST00000396545 CERKLQ49MI3 558 aaPredicted RBP20.6■□□□□ 0.89
TNFSF13-205ENST00000396545 PAGR1Q9BTK6 254 aa20.6■□□□□ 0.89
TNFSF13-205ENST00000396545 KIAA1683Q9H0B3 1180 aa20.6■□□□□ 0.89
TNFSF13-205ENST00000396545 MAGEB6P1A0A0J9YX57 407 aa20.59■□□□□ 0.89
TNFSF13-205ENST00000396545 PRKAR2AP13861 404 aaKnown RBP20.59■□□□□ 0.89
TNFSF13-205ENST00000396545 PDE6AP16499 860 aa20.59■□□□□ 0.89
TNFSF13-205ENST00000396545 MNX1P50219 401 aaPredicted RBP20.59■□□□□ 0.89
TNFSF13-205ENST00000396545 CUL4AQ13619 759 aa20.59■□□□□ 0.89
TNFSF13-205ENST00000396545 ZYXQ15942 572 aaKnown RBP20.59■□□□□ 0.89
TNFSF13-205ENST00000396545 ABCB5Q2M3G0 1257 aa20.59■□□□□ 0.89
TNFSF13-205ENST00000396545 MORN1Q5T089 497 aa20.59■□□□□ 0.89
TNFSF13-205ENST00000396545 GPR142Q7Z601 462 aa20.59■□□□□ 0.89
TNFSF13-205ENST00000396545 RASEFQ8IZ41 740 aa20.59■□□□□ 0.89
TNFSF13-205ENST00000396545 CWC22Q9HCG8 908 aaKnown RBP20.59■□□□□ 0.89
TNFSF13-205ENST00000396545 NAV1Q8NEY1 1877 aa20.59■□□□□ 0.89
TNFSF13-205ENST00000396545 USP17L15C9J2P7 530 aa20.59■□□□□ 0.89
TNFSF13-205ENST00000396545 USP17L13C9JLJ4 530 aa20.59■□□□□ 0.89
TNFSF13-205ENST00000396545 USP17L11C9JVI0 530 aa20.59■□□□□ 0.89
TNFSF13-205ENST00000396545 USP17L18D6R9N7 530 aa20.59■□□□□ 0.89
TNFSF13-205ENST00000396545 USP17L22D6RA61 530 aa20.59■□□□□ 0.89
TNFSF13-205ENST00000396545 USP17L17D6RBQ6 530 aa20.59■□□□□ 0.89
TNFSF13-205ENST00000396545 USP17L19D6RCP7 530 aa20.59■□□□□ 0.89
TNFSF13-205ENST00000396545 USP17L20D6RJB6 530 aa20.59■□□□□ 0.89
TNFSF13-205ENST00000396545 VCAM1P19320 739 aa20.59■□□□□ 0.89
TNFSF13-205ENST00000396545 USP14P54578 494 aa20.59■□□□□ 0.89
TNFSF13-205ENST00000396545 GABPAQ06546 454 aa20.59■□□□□ 0.89
TNFSF13-205ENST00000396545 USP17L24Q0WX57 530 aa20.59■□□□□ 0.89
TNFSF13-205ENST00000396545 UBE3CQ15386 1083 aa20.59■□□□□ 0.89
TNFSF13-205ENST00000396545 SLC9C2Q5TAH2 1124 aa20.59■□□□□ 0.89
TNFSF13-205ENST00000396545 TRMT44Q8IYL2 757 aaKnown RBP20.59■□□□□ 0.89
TNFSF13-205ENST00000396545 ACER1Q8TDN7 264 aa20.59■□□□□ 0.89
TNFSF13-205ENST00000396545 FOXD4L1Q9NU39 408 aa20.59■□□□□ 0.89
TNFSF13-205ENST00000396545 OGDHLQ9ULD0 1010 aa20.59■□□□□ 0.89
TNFSF13-205ENST00000396545 RABGAP1Q9Y3P9 1069 aa20.59■□□□□ 0.89
TNFSF13-205ENST00000396545 CNMDO75829 334 aa20.58■□□□□ 0.88
TNFSF13-205ENST00000396545 GUCY1A2P33402 732 aa20.58■□□□□ 0.88
TNFSF13-205ENST00000396545 PLEKHH3Q7Z736 793 aa20.58■□□□□ 0.88
TNFSF13-205ENST00000396545 CCAR1Q8IX12 1150 aaKnown RBP20.58■□□□□ 0.88
TNFSF13-205ENST00000396545 APPBP2Q92624 585 aa20.58■□□□□ 0.88
TNFSF13-205ENST00000396545 TMX3Q96JJ7 454 aa20.58■□□□□ 0.88
TNFSF13-205ENST00000396545 TTC14Q96N46 770 aa20.58■□□□□ 0.88
TNFSF13-205ENST00000396545 TM6SF1Q9BZW5 370 aa20.58■□□□□ 0.88
TNFSF13-205ENST00000396545 TCRBV5S4A2TA0A5A2 114 aa20.57■□□□□ 0.88
TNFSF13-205ENST00000396545 ZKSCAN1P17029 563 aaPredicted RBP20.57■□□□□ 0.88
TNFSF13-205ENST00000396545 MCM4P33991 863 aa20.57■□□□□ 0.88
TNFSF13-205ENST00000396545 RGS2P41220 211 aa20.57■□□□□ 0.88
TNFSF13-205ENST00000396545 CATSPERGQ6ZRH7 1159 aa20.57■□□□□ 0.88
TNFSF13-205ENST00000396545 UPF3BQ9BZI7 483 aaKnown RBP20.57■□□□□ 0.88
TNFSF13-205ENST00000396545 CRNKL1Q9BZJ0 848 aaKnown RBP20.57■□□□□ 0.88
TNFSF13-205ENST00000396545 NBPF3Q9H094 633 aa20.57■□□□□ 0.88
TNFSF13-205ENST00000396545 CABP5Q9NP86 173 aa20.57■□□□□ 0.88
TNFSF13-205ENST00000396545 RBM8AQ9Y5S9 174 aaKnown RBP20.57■□□□□ 0.88
TNFSF13-205ENST00000396545 ZNF532Q9HCE3 1301 aa20.57■□□□□ 0.88
TNFSF13-205ENST00000396545 POLR3DP05423 398 aaPredicted RBP20.56■□□□□ 0.88
TNFSF13-205ENST00000396545 RNF20Q5VTR2 975 aa20.56■□□□□ 0.88
TNFSF13-205ENST00000396545 LBX2Q6XYB7 198 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms