RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 MTMR7Q9Y216 660 aa18.46■□□□□ 0.55
SNX6-202ENST00000396526 RHBDL3P58872 404 aa18.46■□□□□ 0.55
SNX6-202ENST00000396526 TEKT1Q969V4 418 aa18.46■□□□□ 0.55
SNX6-202ENST00000396526 TMEM47Q9BQJ4 181 aa18.46■□□□□ 0.55
SNX6-202ENST00000396526 TOP1P11387 765 aaKnown RBP18.45■□□□□ 0.54
SNX6-202ENST00000396526 CDC25BP30305 580 aa18.45■□□□□ 0.54
SNX6-202ENST00000396526 SLC44A5Q8NCS7 719 aa18.45■□□□□ 0.54
SNX6-202ENST00000396526 MRFAP1L1Q96HT8 127 aa18.45■□□□□ 0.54
SNX6-202ENST00000396526 AP5Z1O43299 807 aa18.45■□□□□ 0.54
SNX6-202ENST00000396526 HLA-DOAP06340 250 aa18.45■□□□□ 0.54
SNX6-202ENST00000396526 PARP1P09874 1014 aaKnown RBP18.45■□□□□ 0.54
SNX6-202ENST00000396526 PLA2G4DQ86XP0 818 aa18.45■□□□□ 0.54
SNX6-202ENST00000396526 BRWD3Q6RI45 1802 aa18.45■□□□□ 0.54
SNX6-202ENST00000396526 PICALMQ13492 652 aa18.45■□□□□ 0.54
SNX6-202ENST00000396526 DOK7Q18PE1 504 aa18.45■□□□□ 0.54
SNX6-202ENST00000396526 PPP4R3BQ5MIZ7 849 aa18.45■□□□□ 0.54
SNX6-202ENST00000396526 CNKSR1Q969H4 720 aa18.45■□□□□ 0.54
SNX6-202ENST00000396526 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.45■□□□□ 0.54
SNX6-202ENST00000396526 TUBE1Q9UJT0 475 aa18.45■□□□□ 0.54
SNX6-202ENST00000396526 CCDC194A0A1B0GVG4 234 aa18.44■□□□□ 0.54
SNX6-202ENST00000396526 DHX8Q14562 1220 aaKnown RBP18.44■□□□□ 0.54
SNX6-202ENST00000396526 BLIDQ8IZY5 108 aa18.44■□□□□ 0.54
SNX6-202ENST00000396526 POLR2DO15514 142 aaKnown RBP18.44■□□□□ 0.54
SNX6-202ENST00000396526 SMC2O95347 1197 aa18.44■□□□□ 0.54
SNX6-202ENST00000396526 DPCR1Q3MIW9 517 aa18.44■□□□□ 0.54
SNX6-202ENST00000396526 ZNF830Q96NB3 372 aaPredicted RBP18.44■□□□□ 0.54
SNX6-202ENST00000396526 USP40Q9NVE5 1235 aa18.44■□□□□ 0.54
SNX6-202ENST00000396526 SEC63Q9UGP8 760 aaKnown RBP18.44■□□□□ 0.54
SNX6-202ENST00000396526 LONRF3Q496Y0 759 aa18.44■□□□□ 0.54
SNX6-202ENST00000396526 SWAP70Q9UH65 585 aa18.44■□□□□ 0.54
SNX6-202ENST00000396526 MSL1Q68DK7 614 aa18.43■□□□□ 0.54
SNX6-202ENST00000396526 STYK1Q6J9G0 422 aa18.43■□□□□ 0.54
SNX6-202ENST00000396526 HHIPL2Q6UWX4 724 aa18.43■□□□□ 0.54
SNX6-202ENST00000396526 PIK3AP1Q6ZUJ8 805 aa18.43■□□□□ 0.54
SNX6-202ENST00000396526 SMARCE1Q969G3 411 aa18.43■□□□□ 0.54
SNX6-202ENST00000396526 KLRF2D3W0D1 207 aa18.43■□□□□ 0.54
SNX6-202ENST00000396526 NEMFO60524 1076 aa18.43■□□□□ 0.54
SNX6-202ENST00000396526 ZNF174Q15697 407 aa18.43■□□□□ 0.54
SNX6-202ENST00000396526 SPECC1Q5M775 1068 aa18.43■□□□□ 0.54
SNX6-202ENST00000396526 CCDC186Q7Z3E2 898 aa18.43■□□□□ 0.54
SNX6-202ENST00000396526 STK32BQ9NY57 414 aa18.43■□□□□ 0.54
SNX6-202ENST00000396526 PCDHA4Q9UN74 947 aa18.43■□□□□ 0.54
SNX6-202ENST00000396526 NRDCO43847 1150 aa18.42■□□□□ 0.54
SNX6-202ENST00000396526 SOGA3Q5TF21 947 aa18.42■□□□□ 0.54
SNX6-202ENST00000396526 DHX40Q8IX18 779 aaKnown RBP18.42■□□□□ 0.54
SNX6-202ENST00000396526 LAMB1P07942 1786 aa18.42■□□□□ 0.54
SNX6-202ENST00000396526 IKBKBO14920 756 aa18.42■□□□□ 0.54
SNX6-202ENST00000396526 TXLNAP40222 546 aa18.42■□□□□ 0.54
SNX6-202ENST00000396526 HEATR3Q7Z4Q2 680 aa18.42■□□□□ 0.54
SNX6-202ENST00000396526 RRP36Q96EU6 259 aaKnown RBP18.42■□□□□ 0.54
SNX6-202ENST00000396526 CSRNP2Q9H175 543 aa18.42■□□□□ 0.54
SNX6-202ENST00000396526 KIAA1551Q9HCM1 1747 aa18.42■□□□□ 0.54
SNX6-202ENST00000396526 SMARCA1P28370 1054 aa18.42■□□□□ 0.54
SNX6-202ENST00000396526 PNOCQ13519 176 aa18.42■□□□□ 0.54
SNX6-202ENST00000396526 POSTNQ15063 836 aa18.42■□□□□ 0.54
SNX6-202ENST00000396526 PDILTQ8N807 584 aa18.42■□□□□ 0.54
SNX6-202ENST00000396526 PALM3A6NDB9 673 aaPredicted RBP18.41■□□□□ 0.54
SNX6-202ENST00000396526 CC2D2BQ6DHV5 1058 aa18.41■□□□□ 0.54
SNX6-202ENST00000396526 SPZ1Q9BXG8 430 aa18.41■□□□□ 0.54
SNX6-202ENST00000396526 MAD2L2Q9UI95 211 aa18.41■□□□□ 0.54
SNX6-202ENST00000396526 SERPINB13Q9UIV8 391 aa18.41■□□□□ 0.54
SNX6-202ENST00000396526 MYH6P13533 1939 aa18.41■□□□□ 0.54
SNX6-202ENST00000396526 STAG2Q8N3U4 1231 aa18.41■□□□□ 0.54
SNX6-202ENST00000396526 TRIML1Q8N9V2 468 aa18.41■□□□□ 0.54
SNX6-202ENST00000396526 PCDHA5Q9Y5H7 936 aa18.41■□□□□ 0.54
SNX6-202ENST00000396526 MYO1BO43795 1136 aa18.41■□□□□ 0.54
SNX6-202ENST00000396526 GNA11P29992 359 aa18.41■□□□□ 0.54
SNX6-202ENST00000396526 NOLC1Q14978 699 aaKnown RBP eCLIP18.41■□□□□ 0.54
SNX6-202ENST00000396526 PTGDRQ13258 359 aa18.4■□□□□ 0.54
SNX6-202ENST00000396526 SERTAD1Q9UHV2 236 aa18.4■□□□□ 0.54
SNX6-202ENST00000396526 PTGS1P23219 599 aa18.4■□□□□ 0.54
SNX6-202ENST00000396526 MYL5Q02045 173 aa18.4■□□□□ 0.54
SNX6-202ENST00000396526 ISM2Q6H9L7 571 aa18.4■□□□□ 0.54
SNX6-202ENST00000396526 MLKLQ8NB16 471 aa18.4■□□□□ 0.54
SNX6-202ENST00000396526 SUPT20HQ8NEM7 779 aa18.4■□□□□ 0.54
SNX6-202ENST00000396526 TRIM34Q9BYJ4 488 aa18.4■□□□□ 0.54
SNX6-202ENST00000396526 C6orf50Q9HD87 102 aa18.4■□□□□ 0.54
SNX6-202ENST00000396526 A0A087WWV3 80 aa18.39■□□□□ 0.54
SNX6-202ENST00000396526 CBFA2T2O43439 604 aa18.39■□□□□ 0.54
SNX6-202ENST00000396526 TNFRSF25Q93038 417 aa18.39■□□□□ 0.54
SNX6-202ENST00000396526 CEP95Q96GE4 821 aa18.39■□□□□ 0.54
SNX6-202ENST00000396526 SCNN1DP51172 638 aa18.39■□□□□ 0.53
SNX6-202ENST00000396526 ATP2C1P98194 919 aaPredicted RBP18.39■□□□□ 0.53
SNX6-202ENST00000396526 ARL6IP4Q66PJ3 421 aaKnown RBP18.39■□□□□ 0.53
SNX6-202ENST00000396526 METTL16Q86W50 562 aaKnown RBP18.39■□□□□ 0.53
SNX6-202ENST00000396526 BARHL2Q9NY43 387 aa18.39■□□□□ 0.53
SNX6-202ENST00000396526 FAM205CA6NFA0 338 aa18.39■□□□□ 0.53
SNX6-202ENST00000396526 RBM5P52756 815 aaKnown RBP eCLIP18.39■□□□□ 0.53
SNX6-202ENST00000396526 NAPAP54920 295 aa18.39■□□□□ 0.53
SNX6-202ENST00000396526 GSDMDP57764 484 aa18.39■□□□□ 0.53
SNX6-202ENST00000396526 STRIP1Q5VSL9 837 aa18.39■□□□□ 0.53
SNX6-202ENST00000396526 GPKOWQ92917 476 aaPredicted RBP eCLIP18.39■□□□□ 0.53
SNX6-202ENST00000396526 MRIQ9BWK5 157 aa18.39■□□□□ 0.53
SNX6-202ENST00000396526 VWA3AA6NCI4 1184 aa18.38■□□□□ 0.53
SNX6-202ENST00000396526 MCM7P33993 719 aa18.38■□□□□ 0.53
SNX6-202ENST00000396526 FKBP1AP62942 108 aaKnown RBP18.38■□□□□ 0.53
SNX6-202ENST00000396526 IQUBQ8NA54 791 aa18.38■□□□□ 0.53
SNX6-202ENST00000396526 DHX58Q96C10 678 aa18.38■□□□□ 0.53
SNX6-202ENST00000396526 MYO3BQ8WXR4 1341 aa18.38■□□□□ 0.53
SNX6-202ENST00000396526 CCDC17Q96LX7 622 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 695 ms