RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 DCAF15Q66K64 600 aa23.74■■□□□ 1.39
VCPKMT-202ENST00000395860 STK36Q9NRP7 1315 aa23.74■■□□□ 1.39
VCPKMT-202ENST00000395860 DCAF8L1A6NGE4 600 aa23.73■■□□□ 1.39
VCPKMT-202ENST00000395860 PLEKHA8P1O95397 391 aa23.73■■□□□ 1.39
VCPKMT-202ENST00000395860 CAP2P40123 477 aa23.73■■□□□ 1.39
VCPKMT-202ENST00000395860 TMTC3Q6ZXV5 915 aa23.73■■□□□ 1.39
VCPKMT-202ENST00000395860 H3BQV1 296 aa23.73■■□□□ 1.39
VCPKMT-202ENST00000395860 ZSCAN22P10073 491 aaPredicted RBP23.73■■□□□ 1.39
VCPKMT-202ENST00000395860 IFFO2Q5TF58 517 aa23.73■■□□□ 1.39
VCPKMT-202ENST00000395860 PRAMEF18Q5VWM3 479 aa23.73■■□□□ 1.39
VCPKMT-202ENST00000395860 NBPF11Q86T75 865 aa23.73■■□□□ 1.39
VCPKMT-202ENST00000395860 ZBTB21Q9ULJ3 1066 aa23.73■■□□□ 1.39
VCPKMT-202ENST00000395860 MTMR6Q9Y217 621 aa23.73■■□□□ 1.39
VCPKMT-202ENST00000395860 PARP1P09874 1014 aaKnown RBP23.72■■□□□ 1.39
VCPKMT-202ENST00000395860 GNAQP50148 359 aa23.72■■□□□ 1.39
VCPKMT-202ENST00000395860 FOSBP53539 338 aa23.72■■□□□ 1.39
VCPKMT-202ENST00000395860 SULF1Q8IWU6 871 aa23.72■■□□□ 1.39
VCPKMT-202ENST00000395860 MKL1Q969V6 931 aa23.72■■□□□ 1.39
VCPKMT-202ENST00000395860 MAD2L2Q9UI95 211 aa23.72■■□□□ 1.39
VCPKMT-202ENST00000395860 AKAP17AQ02040 695 aaKnown RBP23.71■■□□□ 1.39
VCPKMT-202ENST00000395860 RNF26Q9BY78 433 aaPredicted RBP23.71■■□□□ 1.39
VCPKMT-202ENST00000395860 TAF1DQ9H5J8 278 aaPredicted RBP23.71■■□□□ 1.39
VCPKMT-202ENST00000395860 PHF20L1A8MW92 1017 aa23.7■■□□□ 1.39
VCPKMT-202ENST00000395860 STAG2Q8N3U4 1231 aa23.7■■□□□ 1.39
VCPKMT-202ENST00000395860 SRBD1Q8N5C6 995 aaKnown RBP23.7■■□□□ 1.39
VCPKMT-202ENST00000395860 ZC3H15Q8WU90 426 aaKnown RBP23.7■■□□□ 1.39
VCPKMT-202ENST00000395860 WASF1Q92558 559 aa23.7■■□□□ 1.39
VCPKMT-202ENST00000395860 ZNF341Q9BYN7 854 aa23.7■■□□□ 1.39
VCPKMT-202ENST00000395860 DOCK1Q14185 1865 aa23.7■■□□□ 1.38
VCPKMT-202ENST00000395860 PALM3A6NDB9 673 aaPredicted RBP23.7■■□□□ 1.38
VCPKMT-202ENST00000395860 DEXIO95424 95 aa23.7■■□□□ 1.38
VCPKMT-202ENST00000395860 PDHBP11177 359 aa23.7■■□□□ 1.38
VCPKMT-202ENST00000395860 FUT2Q10981 343 aa23.7■■□□□ 1.38
VCPKMT-202ENST00000395860 SUPT20HL1Q3ZLR7 823 aa23.7■■□□□ 1.38
VCPKMT-202ENST00000395860 USP17L2Q6R6M4 530 aa23.7■■□□□ 1.38
VCPKMT-202ENST00000395860 CDC37L1Q7L3B6 337 aa23.7■■□□□ 1.38
VCPKMT-202ENST00000395860 RASGRP2Q7LDG7 609 aa23.7■■□□□ 1.38
VCPKMT-202ENST00000395860 SIAH1Q8IUQ4 282 aa23.7■■□□□ 1.38
VCPKMT-202ENST00000395860 C8orf76Q96K31 380 aa23.7■■□□□ 1.38
VCPKMT-202ENST00000395860 ALG1Q9BT22 464 aa23.7■■□□□ 1.38
VCPKMT-202ENST00000395860 CNTNAP5Q8WYK1 1306 aa23.69■■□□□ 1.38
VCPKMT-202ENST00000395860 USP17L5A8MUK1 530 aa23.69■■□□□ 1.38
VCPKMT-202ENST00000395860 POTECB2RU33 542 aa23.69■■□□□ 1.38
VCPKMT-202ENST00000395860 ASNSP08243 561 aa23.69■■□□□ 1.38
VCPKMT-202ENST00000395860 GOLGA8HP0CJ92 632 aa23.69■■□□□ 1.38
VCPKMT-202ENST00000395860 EAPPQ56P03 285 aaPredicted RBP23.69■■□□□ 1.38
VCPKMT-202ENST00000395860 ARHGEF10LQ9HCE6 1279 aa23.69■■□□□ 1.38
VCPKMT-202ENST00000395860 PRPF3O43395 683 aaKnown RBP23.68■■□□□ 1.38
VCPKMT-202ENST00000395860 F13A1P00488 732 aa23.68■■□□□ 1.38
VCPKMT-202ENST00000395860 PNMA8AQ86V59 439 aaPredicted RBP23.68■■□□□ 1.38
VCPKMT-202ENST00000395860 LZTS2Q9BRK4 669 aa23.68■■□□□ 1.38
VCPKMT-202ENST00000395860 ADM5C9JUS6 153 aa23.68■■□□□ 1.38
VCPKMT-202ENST00000395860 RAD21O60216 631 aa23.68■■□□□ 1.38
VCPKMT-202ENST00000395860 CTNND1O60716 968 aaKnown RBP23.68■■□□□ 1.38
VCPKMT-202ENST00000395860 SNHG28P0DPA3 235 aa23.68■■□□□ 1.38
VCPKMT-202ENST00000395860 ASPRV1Q53RT3 343 aa23.68■■□□□ 1.38
VCPKMT-202ENST00000395860 KRT26Q7Z3Y9 468 aa23.68■■□□□ 1.38
VCPKMT-202ENST00000395860 AIFM3Q96NN9 605 aa23.68■■□□□ 1.38
VCPKMT-202ENST00000395860 KLRF2D3W0D1 207 aa23.67■■□□□ 1.38
VCPKMT-202ENST00000395860 UBE2Q2LH0YL09 131 aa23.67■■□□□ 1.38
VCPKMT-202ENST00000395860 GBP4Q96PP9 640 aa23.67■■□□□ 1.38
VCPKMT-202ENST00000395860 V9GY48 417 aaPredicted RBP23.67■■□□□ 1.38
VCPKMT-202ENST00000395860 SSC5DA1L4H1 1573 aa23.67■■□□□ 1.38
VCPKMT-202ENST00000395860 GUCY1B3Q02153 619 aa23.66■■□□□ 1.38
VCPKMT-202ENST00000395860 GINM1Q9NU53 330 aa23.66■■□□□ 1.38
VCPKMT-202ENST00000395860 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.66■■□□□ 1.38
VCPKMT-202ENST00000395860 SYNPO2Q9UMS6 1093 aa23.66■■□□□ 1.38
VCPKMT-202ENST00000395860 BAZ2BQ9UIF8 2168 aaKnown RBP23.66■■□□□ 1.38
VCPKMT-202ENST00000395860 FRMPD2Q68DX3 1309 aaPredicted RBP23.66■■□□□ 1.38
VCPKMT-202ENST00000395860 TRIM29Q14134 588 aa23.65■■□□□ 1.38
VCPKMT-202ENST00000395860 SLFN13Q68D06 897 aa23.65■■□□□ 1.38
VCPKMT-202ENST00000395860 GMCL1P1Q8NEA9 526 aa23.65■■□□□ 1.38
VCPKMT-202ENST00000395860 FBXO18Q8NFZ0 1043 aa23.65■■□□□ 1.38
VCPKMT-202ENST00000395860 RBM27Q9P2N5 1060 aaKnown RBP23.65■■□□□ 1.38
VCPKMT-202ENST00000395860 ZNF112Q9UJU3 913 aa23.65■■□□□ 1.38
VCPKMT-202ENST00000395860 CCDC96Q2M329 555 aa23.65■■□□□ 1.38
VCPKMT-202ENST00000395860 USP48Q86UV5 1035 aa23.65■■□□□ 1.38
VCPKMT-202ENST00000395860 FERMT3Q86UX7 667 aa23.65■■□□□ 1.38
VCPKMT-202ENST00000395860 RGS22Q8NE09 1264 aa23.65■■□□□ 1.38
VCPKMT-202ENST00000395860 WRNIP1Q96S55 665 aa23.65■■□□□ 1.38
VCPKMT-202ENST00000395860 ATP6V1DQ9Y5K8 247 aa23.65■■□□□ 1.38
VCPKMT-202ENST00000395860 MYH15Q9Y2K3 1946 aa23.64■■□□□ 1.38
VCPKMT-202ENST00000395860 hCG_1642624A0A1W2PR95 340 aa23.64■■□□□ 1.37
VCPKMT-202ENST00000395860 A0A1W2PRG0 241 aa23.64■■□□□ 1.37
VCPKMT-202ENST00000395860 F5H6K3 240 aa23.64■■□□□ 1.37
VCPKMT-202ENST00000395860 INPP5BP32019 993 aa23.64■■□□□ 1.37
VCPKMT-202ENST00000395860 ECE1P42892 770 aa23.64■■□□□ 1.37
VCPKMT-202ENST00000395860 KLRC3Q07444 240 aa23.64■■□□□ 1.37
VCPKMT-202ENST00000395860 ZNF543Q08ER8 600 aa23.64■■□□□ 1.37
VCPKMT-202ENST00000395860 GPATCH4Q5T3I0 446 aaKnown RBP23.64■■□□□ 1.37
VCPKMT-202ENST00000395860 OTUD7BQ6GQQ9 843 aa23.64■■□□□ 1.37
VCPKMT-202ENST00000395860 DCAF4Q8WV16 495 aa23.64■■□□□ 1.37
VCPKMT-202ENST00000395860 SPZ1Q9BXG8 430 aa23.64■■□□□ 1.37
VCPKMT-202ENST00000395860 GJB4Q9NTQ9 266 aa23.64■■□□□ 1.37
VCPKMT-202ENST00000395860 SMARCA1P28370 1054 aa23.63■■□□□ 1.37
VCPKMT-202ENST00000395860 NFKBIBQ15653 356 aa23.63■■□□□ 1.37
VCPKMT-202ENST00000395860 PKN1Q16512 942 aa23.63■■□□□ 1.37
VCPKMT-202ENST00000395860 MCTP1Q6DN14 999 aa23.63■■□□□ 1.37
VCPKMT-202ENST00000395860 DLK2Q6UY11 383 aa23.63■■□□□ 1.37
VCPKMT-202ENST00000395860 ACER1Q8TDN7 264 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms