RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 E2F5Q15329 346 aa10.01□□□□□ -0.81
MSH5-205ENST00000395853 E4F1Q66K89 784 aaPredicted RBP10.01□□□□□ -0.81
MSH5-205ENST00000395853 RSRC2Q7L4I2 434 aaKnown RBP10.01□□□□□ -0.81
MSH5-205ENST00000395853 AMIGO3Q86WK7 504 aa10.01□□□□□ -0.81
MSH5-205ENST00000395853 PLEKHM2Q8IWE5 1019 aa10.01□□□□□ -0.81
MSH5-205ENST00000395853 SYCP3Q8IZU3 236 aa10.01□□□□□ -0.81
MSH5-205ENST00000395853 LINC00116Q8NCU8 138 aa10.01□□□□□ -0.81
MSH5-205ENST00000395853 NEK9Q8TD19 979 aa10.01□□□□□ -0.81
MSH5-205ENST00000395853 RUFY1Q96T51 708 aa10.01□□□□□ -0.81
MSH5-205ENST00000395853 TRPC6Q9Y210 931 aa10.01□□□□□ -0.81
MSH5-205ENST00000395853 KDM3BQ7LBC6 1761 aa10.01□□□□□ -0.81
MSH5-205ENST00000395853 MEFVO15553 781 aaPredicted RBP10□□□□□ -0.81
MSH5-205ENST00000395853 KIF4AO95239 1232 aa10□□□□□ -0.81
MSH5-205ENST00000395853 CA8P35219 290 aa10□□□□□ -0.81
MSH5-205ENST00000395853 GALNT15Q8N3T1 639 aa10□□□□□ -0.81
MSH5-205ENST00000395853 OTUD7AQ8TE49 926 aaPredicted RBP10□□□□□ -0.81
MSH5-205ENST00000395853 NAT10Q9H0A0 1025 aaKnown RBP10□□□□□ -0.81
MSH5-205ENST00000395853 GBP3Q9H0R5 595 aa10□□□□□ -0.81
MSH5-205ENST00000395853 ZNF510Q9Y2H8 683 aa10□□□□□ -0.81
MSH5-205ENST00000395853 ATP8A1Q9Y2Q0 1164 aa10□□□□□ -0.81
MSH5-205ENST00000395853 B4DLN1 442 aa10□□□□□ -0.81
MSH5-205ENST00000395853 RNMTO43148 476 aaKnown RBP10□□□□□ -0.81
MSH5-205ENST00000395853 ZSCAN12O43309 604 aa10□□□□□ -0.81
MSH5-205ENST00000395853 VIL1P09327 827 aaKnown RBP10□□□□□ -0.81
MSH5-205ENST00000395853 GNAT1P11488 350 aa10□□□□□ -0.81
MSH5-205ENST00000395853 ENOX2Q16206 610 aaKnown RBP10□□□□□ -0.81
MSH5-205ENST00000395853 PKN1Q16512 942 aa10□□□□□ -0.81
MSH5-205ENST00000395853 CCDC57Q2TAC2 916 aa10□□□□□ -0.81
MSH5-205ENST00000395853 RC3H1Q5TC82 1133 aaKnown RBP10□□□□□ -0.81
MSH5-205ENST00000395853 NOL8Q76FK4 1167 aaKnown RBP10□□□□□ -0.81
MSH5-205ENST00000395853 RNF168Q8IYW5 571 aaPredicted RBP10□□□□□ -0.81
MSH5-205ENST00000395853 ATP11CQ8NB49 1132 aa10□□□□□ -0.81
MSH5-205ENST00000395853 BCAS4Q8TDM0 211 aa10□□□□□ -0.81
MSH5-205ENST00000395853 HDAC7Q8WUI4 952 aa10□□□□□ -0.81
MSH5-205ENST00000395853 GOLGA1Q92805 767 aa10□□□□□ -0.81
MSH5-205ENST00000395853 CCDC47Q96A33 483 aaKnown RBP10□□□□□ -0.81
MSH5-205ENST00000395853 MTMR7Q9Y216 660 aa10□□□□□ -0.81
MSH5-205ENST00000395853 BTBD11A6QL63 1104 aa9.99□□□□□ -0.81
MSH5-205ENST00000395853 RNF40O75150 1001 aa9.99□□□□□ -0.81
MSH5-205ENST00000395853 MMP10P09238 476 aa9.99□□□□□ -0.81
MSH5-205ENST00000395853 GSPT1P15170 499 aaKnown RBP9.99□□□□□ -0.81
MSH5-205ENST00000395853 TEFQ10587 303 aa9.99□□□□□ -0.81
MSH5-205ENST00000395853 PABPC4Q13310 644 aaKnown RBP eCLIP9.99□□□□□ -0.81
MSH5-205ENST00000395853 CCDC150Q8NCX0 1101 aa9.99□□□□□ -0.81
MSH5-205ENST00000395853 CCDC87Q9NVE4 849 aa9.99□□□□□ -0.81
MSH5-205ENST00000395853 TMOD3Q9NYL9 352 aa9.99□□□□□ -0.81
MSH5-205ENST00000395853 L1RE1Q9UN81 338 aa9.99□□□□□ -0.81
MSH5-205ENST00000395853 ITM2BQ9Y287 266 aa9.99□□□□□ -0.81
MSH5-205ENST00000395853 WDR37Q9Y2I8 494 aa9.99□□□□□ -0.81
MSH5-205ENST00000395853 ARFGEF1Q9Y6D6 1849 aa9.99□□□□□ -0.81
MSH5-205ENST00000395853 GNPATO15228 680 aa9.99□□□□□ -0.81
MSH5-205ENST00000395853 PDHBP11177 359 aa9.99□□□□□ -0.81
MSH5-205ENST00000395853 NAT2P11245 290 aa9.99□□□□□ -0.81
MSH5-205ENST00000395853 STIP1P31948 543 aaKnown RBP9.99□□□□□ -0.81
MSH5-205ENST00000395853 GSDMDP57764 484 aa9.99□□□□□ -0.81
MSH5-205ENST00000395853 ADCY1Q08828 1119 aa9.99□□□□□ -0.81
MSH5-205ENST00000395853 MAP3K11Q16584 847 aa9.99□□□□□ -0.81
MSH5-205ENST00000395853 GNPTABQ3T906 1256 aa9.99□□□□□ -0.81
MSH5-205ENST00000395853 TAF4BQ92750 862 aa9.99□□□□□ -0.81
MSH5-205ENST00000395853 SLC35B4Q969S0 331 aa9.99□□□□□ -0.81
MSH5-205ENST00000395853 EVI5LQ96CN4 794 aa9.99□□□□□ -0.81
MSH5-205ENST00000395853 TRIM11Q96F44 468 aa9.99□□□□□ -0.81
MSH5-205ENST00000395853 VCPKMTQ9H867 229 aa9.99□□□□□ -0.81
MSH5-205ENST00000395853 GPCPD1Q9NPB8 672 aa9.99□□□□□ -0.81
MSH5-205ENST00000395853 PARP3Q9Y6F1 533 aa9.99□□□□□ -0.81
MSH5-205ENST00000395853 BRCA1P38398 1863 aaKnown RBP9.99□□□□□ -0.81
MSH5-205ENST00000395853 LIN7AO14910 233 aaPredicted RBP9.98□□□□□ -0.81
MSH5-205ENST00000395853 CREB3O43889 395 aa9.98□□□□□ -0.81
MSH5-205ENST00000395853 CEP104O60308 925 aa9.98□□□□□ -0.81
MSH5-205ENST00000395853 PPFIA3O75145 1194 aa9.98□□□□□ -0.81
MSH5-205ENST00000395853 ANXA1P04083 346 aa9.98□□□□□ -0.81
MSH5-205ENST00000395853 HARSP12081 509 aaKnown RBP9.98□□□□□ -0.81
MSH5-205ENST00000395853 USP5P45974 858 aa9.98□□□□□ -0.81
MSH5-205ENST00000395853 KCNJ6P48051 423 aa9.98□□□□□ -0.81
MSH5-205ENST00000395853 SLMAPQ14BN4 828 aa9.98□□□□□ -0.81
MSH5-205ENST00000395853 ANO6Q4KMQ2 910 aa9.98□□□□□ -0.81
MSH5-205ENST00000395853 C1orf141Q5JVX7 400 aa9.98□□□□□ -0.81
MSH5-205ENST00000395853 KLHL10Q6JEL2 608 aa9.98□□□□□ -0.81
MSH5-205ENST00000395853 KLRG1Q96E93 195 aa9.98□□□□□ -0.81
MSH5-205ENST00000395853 INTS4Q96HW7 963 aaKnown RBP9.98□□□□□ -0.81
MSH5-205ENST00000395853 SLC40A1Q9NP59 571 aa9.98□□□□□ -0.81
MSH5-205ENST00000395853 BARX2Q9UMQ3 279 aaPredicted RBP9.98□□□□□ -0.81
MSH5-205ENST00000395853 CNPY2Q9Y2B0 182 aa9.98□□□□□ -0.81
MSH5-205ENST00000395853 GOLGA6L9A6NEM1 432 aa9.98□□□□□ -0.81
MSH5-205ENST00000395853 GNAI2P04899 355 aa9.98□□□□□ -0.81
MSH5-205ENST00000395853 DESP17661 470 aa9.98□□□□□ -0.81
MSH5-205ENST00000395853 PPP2R3AQ06190 1150 aa9.98□□□□□ -0.81
MSH5-205ENST00000395853 POSTNQ15063 836 aa9.98□□□□□ -0.81
MSH5-205ENST00000395853 CCDC92Q53HC0 331 aaPredicted RBP9.98□□□□□ -0.81
MSH5-205ENST00000395853 TRAPPC3LQ5T215 181 aa9.98□□□□□ -0.81
MSH5-205ENST00000395853 OLFML1Q6UWY5 402 aa9.98□□□□□ -0.81
MSH5-205ENST00000395853 YTHDF3Q7Z739 585 aaKnown RBP9.98□□□□□ -0.81
MSH5-205ENST00000395853 IFNL2Q8IZJ0 200 aa9.98□□□□□ -0.81
MSH5-205ENST00000395853 CHPF2Q9P2E5 772 aa9.98□□□□□ -0.81
MSH5-205ENST00000395853 HOOK1Q9UJC3 728 aaKnown RBP9.98□□□□□ -0.81
MSH5-205ENST00000395853 RTCBQ9Y3I0 505 aaKnown RBP9.98□□□□□ -0.81
MSH5-205ENST00000395853 C4AP0C0L4 1744 aa9.98□□□□□ -0.81
MSH5-205ENST00000395853 A0A1B0GVG6 124 aa9.98□□□□□ -0.81
MSH5-205ENST00000395853 SMIM24O75264 130 aa9.98□□□□□ -0.81
MSH5-205ENST00000395853 IRAK1P51617 712 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms