RNA–Protein interactions for RNA: ENST00000395363.5

HLA-DQA1-203, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,206 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-203ENST00000395363 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.94□□□□□ -0.18
HLA-DQA1-203ENST00000395363 TANGO6Q9C0B7 1094 aa13.94□□□□□ -0.18
HLA-DQA1-203ENST00000395363 LNPKQ9C0E8 428 aa13.94□□□□□ -0.18
HLA-DQA1-203ENST00000395363 LAMA4Q16363 1823 aa13.94□□□□□ -0.18
HLA-DQA1-203ENST00000395363 TTC41PQ6P2S7 1318 aa13.93□□□□□ -0.18
HLA-DQA1-203ENST00000395363 ZNF236Q9UL36 1845 aa13.93□□□□□ -0.18
HLA-DQA1-203ENST00000395363 USP17L15C9J2P7 530 aa13.93□□□□□ -0.18
HLA-DQA1-203ENST00000395363 USP17L13C9JLJ4 530 aa13.93□□□□□ -0.18
HLA-DQA1-203ENST00000395363 USP17L11C9JVI0 530 aa13.93□□□□□ -0.18
HLA-DQA1-203ENST00000395363 USP17L18D6R9N7 530 aa13.93□□□□□ -0.18
HLA-DQA1-203ENST00000395363 USP17L22D6RA61 530 aa13.93□□□□□ -0.18
HLA-DQA1-203ENST00000395363 USP17L17D6RBQ6 530 aa13.93□□□□□ -0.18
HLA-DQA1-203ENST00000395363 USP17L19D6RCP7 530 aa13.93□□□□□ -0.18
HLA-DQA1-203ENST00000395363 USP17L20D6RJB6 530 aa13.93□□□□□ -0.18
HLA-DQA1-203ENST00000395363 FOXP2O15409 715 aa13.93□□□□□ -0.18
HLA-DQA1-203ENST00000395363 RAD21O60216 631 aa13.93□□□□□ -0.18
HLA-DQA1-203ENST00000395363 USP17L24Q0WX57 530 aa13.93□□□□□ -0.18
HLA-DQA1-203ENST00000395363 PRPF38BQ5VTL8 546 aaKnown RBP13.93□□□□□ -0.18
HLA-DQA1-203ENST00000395363 TMEM179Q6ZVK1 233 aa13.93□□□□□ -0.18
HLA-DQA1-203ENST00000395363 GPR142Q7Z601 462 aa13.93□□□□□ -0.18
HLA-DQA1-203ENST00000395363 DIS3LQ8TF46 1054 aaKnown RBP13.93□□□□□ -0.18
HLA-DQA1-203ENST00000395363 DEFB118Q96PH6 123 aa13.93□□□□□ -0.18
HLA-DQA1-203ENST00000395363 FBXO28Q9NVF7 368 aa13.93□□□□□ -0.18
HLA-DQA1-203ENST00000395363 EEF2P13639 858 aaKnown RBP13.92□□□□□ -0.18
HLA-DQA1-203ENST00000395363 RASA1P20936 1047 aa13.92□□□□□ -0.18
HLA-DQA1-203ENST00000395363 UBXN2AP68543 259 aa13.92□□□□□ -0.18
HLA-DQA1-203ENST00000395363 IRF5Q13568 498 aa13.92□□□□□ -0.18
HLA-DQA1-203ENST00000395363 U2AF1L4Q8WU68 220 aaKnown RBP13.92□□□□□ -0.18
HLA-DQA1-203ENST00000395363 NUP88Q99567 741 aaPredicted RBP13.92□□□□□ -0.18
HLA-DQA1-203ENST00000395363 INCENPQ9NQS7 918 aa13.92□□□□□ -0.18
HLA-DQA1-203ENST00000395363 SWAP70Q9UH65 585 aa13.92□□□□□ -0.18
HLA-DQA1-203ENST00000395363 TACC3Q9Y6A5 838 aa13.92□□□□□ -0.18
HLA-DQA1-203ENST00000395363 GLRX3O76003 335 aaKnown RBP13.91□□□□□ -0.18
HLA-DQA1-203ENST00000395363 APPP05067 770 aa13.91□□□□□ -0.18
HLA-DQA1-203ENST00000395363 GJB1P08034 283 aa13.91□□□□□ -0.18
HLA-DQA1-203ENST00000395363 TDO2P48775 406 aa13.91□□□□□ -0.18
HLA-DQA1-203ENST00000395363 USP14P54578 494 aa13.91□□□□□ -0.18
HLA-DQA1-203ENST00000395363 PDE1AP54750 535 aa13.91□□□□□ -0.18
HLA-DQA1-203ENST00000395363 HDAC1Q13547 482 aaPredicted RBP13.91□□□□□ -0.18
HLA-DQA1-203ENST00000395363 ZMYM1Q5SVZ6 1142 aa13.91□□□□□ -0.18
HLA-DQA1-203ENST00000395363 VPS53Q5VIR6 699 aa13.91□□□□□ -0.18
HLA-DQA1-203ENST00000395363 RASGRP2Q7LDG7 609 aa13.91□□□□□ -0.18
HLA-DQA1-203ENST00000395363 ATG4CQ96DT6 458 aa13.91□□□□□ -0.18
HLA-DQA1-203ENST00000395363 FLRT1Q9NZU1 646 aa13.91□□□□□ -0.18
HLA-DQA1-203ENST00000395363 ARPP21Q9UBL0 812 aaPredicted RBP13.91□□□□□ -0.18
HLA-DQA1-203ENST00000395363 SUPT16HQ9Y5B9 1047 aaKnown RBP13.91□□□□□ -0.18
HLA-DQA1-203ENST00000395363 ROBO3Q96MS0 1386 aa13.91□□□□□ -0.18
HLA-DQA1-203ENST00000395363 SZT2Q5T011 3432 aa13.9□□□□□ -0.18
HLA-DQA1-203ENST00000395363 LCTP09848 1927 aa13.9□□□□□ -0.18
HLA-DQA1-203ENST00000395363 A0A0D9SFI3 127 aa13.9□□□□□ -0.18
HLA-DQA1-203ENST00000395363 ERC2O15083 957 aa13.9□□□□□ -0.18
HLA-DQA1-203ENST00000395363 HMGCRP04035 888 aa13.9□□□□□ -0.18
HLA-DQA1-203ENST00000395363 GJA8P48165 433 aa13.9□□□□□ -0.18
HLA-DQA1-203ENST00000395363 MORN1Q5T089 497 aa13.9□□□□□ -0.18
HLA-DQA1-203ENST00000395363 PLEKHH3Q7Z736 793 aa13.9□□□□□ -0.18
HLA-DQA1-203ENST00000395363 AMOTL1Q8IY63 956 aa13.9□□□□□ -0.18
HLA-DQA1-203ENST00000395363 IFNL3Q8IZI9 196 aa13.9□□□□□ -0.18
HLA-DQA1-203ENST00000395363 PXYLP1Q8TE99 480 aa13.9□□□□□ -0.18
HLA-DQA1-203ENST00000395363 DDRGK1Q96HY6 314 aa13.9□□□□□ -0.18
HLA-DQA1-203ENST00000395363 FAM227BQ96M60 508 aa13.9□□□□□ -0.18
HLA-DQA1-203ENST00000395363 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.9□□□□□ -0.18
HLA-DQA1-203ENST00000395363 VCPKMTQ9H867 229 aa13.9□□□□□ -0.18
HLA-DQA1-203ENST00000395363 RABGAP1Q9Y3P9 1069 aa13.9□□□□□ -0.18
HLA-DQA1-203ENST00000395363 FLOT1O75955 427 aa13.89□□□□□ -0.19
HLA-DQA1-203ENST00000395363 FARP2O94887 1054 aaPredicted RBP13.89□□□□□ -0.19
HLA-DQA1-203ENST00000395363 PRKAR2AP13861 404 aaKnown RBP13.89□□□□□ -0.19
HLA-DQA1-203ENST00000395363 CCND3P30281 292 aaPredicted RBP13.89□□□□□ -0.19
HLA-DQA1-203ENST00000395363 CTDSPL2Q05D32 466 aa13.89□□□□□ -0.19
HLA-DQA1-203ENST00000395363 PLS1Q14651 629 aa13.89□□□□□ -0.19
HLA-DQA1-203ENST00000395363 FAM47AQ5JRC9 791 aa13.89□□□□□ -0.19
HLA-DQA1-203ENST00000395363 FAM83BQ5T0W9 1011 aa13.89□□□□□ -0.19
HLA-DQA1-203ENST00000395363 CCAR1Q8IX12 1150 aaKnown RBP13.89□□□□□ -0.19
HLA-DQA1-203ENST00000395363 NPLOC4Q8TAT6 608 aa13.89□□□□□ -0.19
HLA-DQA1-203ENST00000395363 USP6NLQ92738 828 aa13.89□□□□□ -0.19
HLA-DQA1-203ENST00000395363 NUDT12Q9BQG2 462 aa13.89□□□□□ -0.19
HLA-DQA1-203ENST00000395363 MOV10L1Q9BXT6 1211 aaKnown RBP13.89□□□□□ -0.19
HLA-DQA1-203ENST00000395363 ARHGEF10LQ9HCE6 1279 aa13.89□□□□□ -0.19
HLA-DQA1-203ENST00000395363 CWC22Q9HCG8 908 aaKnown RBP13.89□□□□□ -0.19
HLA-DQA1-203ENST00000395363 PAK6Q9NQU5 681 aaPredicted RBP13.89□□□□□ -0.19
HLA-DQA1-203ENST00000395363 TMX2Q9Y320 296 aa13.89□□□□□ -0.19
HLA-DQA1-203ENST00000395363 MYH6P13533 1939 aa13.89□□□□□ -0.19
HLA-DQA1-203ENST00000395363 SGPL1O95470 568 aa13.88□□□□□ -0.19
HLA-DQA1-203ENST00000395363 MAPK4P31152 587 aa13.88□□□□□ -0.19
HLA-DQA1-203ENST00000395363 CACNB2Q08289 660 aaPredicted RBP13.88□□□□□ -0.19
HLA-DQA1-203ENST00000395363 SBK1Q52WX2 424 aa13.88□□□□□ -0.19
HLA-DQA1-203ENST00000395363 UBE2Q1Q7Z7E8 422 aa13.88□□□□□ -0.19
HLA-DQA1-203ENST00000395363 LRRC47Q8N1G4 583 aaKnown RBP13.88□□□□□ -0.19
HLA-DQA1-203ENST00000395363 NKX2-3Q8TAU0 364 aa13.88□□□□□ -0.19
HLA-DQA1-203ENST00000395363 H0YGN5 161 aa13.87□□□□□ -0.19
HLA-DQA1-203ENST00000395363 TFRCP02786 760 aaKnown RBP13.87□□□□□ -0.19
HLA-DQA1-203ENST00000395363 ZFYP08048 801 aaPredicted RBP13.87□□□□□ -0.19
HLA-DQA1-203ENST00000395363 ZKSCAN1P17029 563 aaPredicted RBP13.87□□□□□ -0.19
HLA-DQA1-203ENST00000395363 NMIQ13287 307 aaPredicted RBP13.87□□□□□ -0.19
HLA-DQA1-203ENST00000395363 LBX2Q6XYB7 198 aa13.87□□□□□ -0.19
HLA-DQA1-203ENST00000395363 ZNF589Q86UQ0 364 aaPredicted RBP13.87□□□□□ -0.19
HLA-DQA1-203ENST00000395363 SMC5Q8IY18 1101 aa13.87□□□□□ -0.19
HLA-DQA1-203ENST00000395363 GCC1Q96CN9 775 aa13.87□□□□□ -0.19
HLA-DQA1-203ENST00000395363 CCDC17Q96LX7 622 aa13.87□□□□□ -0.19
HLA-DQA1-203ENST00000395363 MKNK2Q9HBH9 465 aa13.87□□□□□ -0.19
HLA-DQA1-203ENST00000395363 ZBTB47Q9UFB7 747 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms