RNA–Protein interactions for RNA: ENST00000395303.7

HLA-DMA-202, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-202ENST00000395303 SH2D4AQ9H788 454 aa15.9■□□□□ 0.14
HLA-DMA-202ENST00000395303 MKNK2Q9HBH9 465 aa15.9■□□□□ 0.14
HLA-DMA-202ENST00000395303 ARHGEF10LQ9HCE6 1279 aa15.9■□□□□ 0.14
HLA-DMA-202ENST00000395303 DIAPH3Q9NSV4 1193 aa15.9■□□□□ 0.14
HLA-DMA-202ENST00000395303 NYAP2Q9P242 653 aa15.9■□□□□ 0.14
HLA-DMA-202ENST00000395303 SLC3A2P08195 630 aaKnown RBP15.89■□□□□ 0.13
HLA-DMA-202ENST00000395303 EEF2P13639 858 aaKnown RBP15.89■□□□□ 0.13
HLA-DMA-202ENST00000395303 EN2P19622 333 aaPredicted RBP15.89■□□□□ 0.13
HLA-DMA-202ENST00000395303 PSMC4P43686 418 aa15.89■□□□□ 0.13
HLA-DMA-202ENST00000395303 HERVK_113P62684 666 aa15.89■□□□□ 0.13
HLA-DMA-202ENST00000395303 ZYXQ15942 572 aaKnown RBP15.89■□□□□ 0.13
HLA-DMA-202ENST00000395303 POTEEQ6S8J3 1075 aa15.89■□□□□ 0.13
HLA-DMA-202ENST00000395303 CWC27Q6UX04 472 aaKnown RBP15.89■□□□□ 0.13
HLA-DMA-202ENST00000395303 ZNF444Q8N0Y2 327 aaPredicted RBP15.89■□□□□ 0.13
HLA-DMA-202ENST00000395303 ANKRD13CQ8N6S4 541 aa15.89■□□□□ 0.13
HLA-DMA-202ENST00000395303 LPAR1Q92633 364 aa15.89■□□□□ 0.13
HLA-DMA-202ENST00000395303 TRIM47Q96LD4 638 aa15.89■□□□□ 0.13
HLA-DMA-202ENST00000395303 VCPKMTQ9H867 229 aa15.89■□□□□ 0.13
HLA-DMA-202ENST00000395303 TACC3Q9Y6A5 838 aa15.89■□□□□ 0.13
HLA-DMA-202ENST00000395303 PTCH2Q9Y6C5 1203 aa15.89■□□□□ 0.13
HLA-DMA-202ENST00000395303 ORC4O43929 436 aa15.88■□□□□ 0.13
HLA-DMA-202ENST00000395303 KIAA1755Q5JYT7 1200 aa15.88■□□□□ 0.13
HLA-DMA-202ENST00000395303 NEDD1Q8NHV4 660 aa15.88■□□□□ 0.13
HLA-DMA-202ENST00000395303 RAD50Q92878 1312 aa15.88■□□□□ 0.13
HLA-DMA-202ENST00000395303 PRDM1O75626 825 aa15.87■□□□□ 0.13
HLA-DMA-202ENST00000395303 HOXD10P28358 340 aa15.87■□□□□ 0.13
HLA-DMA-202ENST00000395303 FCGRTP55899 365 aa15.87■□□□□ 0.13
HLA-DMA-202ENST00000395303 CTDSPL2Q05D32 466 aa15.87■□□□□ 0.13
HLA-DMA-202ENST00000395303 STK11IPQ8N1F8 1099 aa15.87■□□□□ 0.13
HLA-DMA-202ENST00000395303 MKL1Q969V6 931 aa15.87■□□□□ 0.13
HLA-DMA-202ENST00000395303 DSCC1Q9BVC3 393 aa15.87■□□□□ 0.13
HLA-DMA-202ENST00000395303 RPAP3Q9H6T3 665 aaPredicted RBP15.87■□□□□ 0.13
HLA-DMA-202ENST00000395303 RBPJLQ9UBG7 517 aa15.87■□□□□ 0.13
HLA-DMA-202ENST00000395303 SRRDQ9UH36 339 aa15.87■□□□□ 0.13
HLA-DMA-202ENST00000395303 SYNPO2Q9UMS6 1093 aa15.87■□□□□ 0.13
HLA-DMA-202ENST00000395303 WDR46O15213 610 aaKnown RBP15.86■□□□□ 0.13
HLA-DMA-202ENST00000395303 CHMLP26374 656 aa15.86■□□□□ 0.13
HLA-DMA-202ENST00000395303 IL25Q9H293 177 aa15.86■□□□□ 0.13
HLA-DMA-202ENST00000395303 TXNRD2Q9NNW7 524 aa15.86■□□□□ 0.13
HLA-DMA-202ENST00000395303 MTMR4Q9NYA4 1195 aa15.86■□□□□ 0.13
HLA-DMA-202ENST00000395303 RABGAP1Q9Y3P9 1069 aa15.86■□□□□ 0.13
HLA-DMA-202ENST00000395303 MYPNQ86TC9 1320 aa15.86■□□□□ 0.13
HLA-DMA-202ENST00000395303 CEP290O15078 2479 aa15.85■□□□□ 0.13
HLA-DMA-202ENST00000395303 SPDYE16A6NNV3 312 aaPredicted RBP15.85■□□□□ 0.13
HLA-DMA-202ENST00000395303 CNMDO75829 334 aa15.85■□□□□ 0.13
HLA-DMA-202ENST00000395303 PCP11498 1178 aaKnown RBP15.85■□□□□ 0.13
HLA-DMA-202ENST00000395303 NOVP48745 357 aa15.85■□□□□ 0.13
HLA-DMA-202ENST00000395303 NBPF3Q9H094 633 aa15.85■□□□□ 0.13
HLA-DMA-202ENST00000395303 GOPCQ9HD26 462 aa15.85■□□□□ 0.13
HLA-DMA-202ENST00000395303 ZNF236Q9UL36 1845 aa15.84■□□□□ 0.13
HLA-DMA-202ENST00000395303 FMNL1O95466 1100 aaPredicted RBP15.84■□□□□ 0.13
HLA-DMA-202ENST00000395303 TSPY3P0CV98 308 aa15.84■□□□□ 0.13
HLA-DMA-202ENST00000395303 TSPY8P0CW00 308 aa15.84■□□□□ 0.13
HLA-DMA-202ENST00000395303 ERVK-9P63128 1117 aa15.84■□□□□ 0.13
HLA-DMA-202ENST00000395303 ERVK-24P63145 666 aa15.84■□□□□ 0.13
HLA-DMA-202ENST00000395303 TFAP4Q01664 338 aa15.84■□□□□ 0.13
HLA-DMA-202ENST00000395303 COG2Q14746 738 aa15.84■□□□□ 0.13
HLA-DMA-202ENST00000395303 Q3C1V9 767 aa15.84■□□□□ 0.13
HLA-DMA-202ENST00000395303 SLC9C1Q4G0N8 1177 aa15.84■□□□□ 0.13
HLA-DMA-202ENST00000395303 HABP4Q5JVS0 413 aaKnown RBP15.84■□□□□ 0.13
HLA-DMA-202ENST00000395303 GPRC5AQ8NFJ5 357 aa15.84■□□□□ 0.13
HLA-DMA-202ENST00000395303 RUFY2Q8WXA3 655 aa15.84■□□□□ 0.13
HLA-DMA-202ENST00000395303 CEP95Q96GE4 821 aa15.84■□□□□ 0.13
HLA-DMA-202ENST00000395303 INCENPQ9NQS7 918 aa15.84■□□□□ 0.13
HLA-DMA-202ENST00000395303 HOXC10Q9NYD6 342 aa15.84■□□□□ 0.13
HLA-DMA-202ENST00000395303 TNPO2O14787 897 aaKnown RBP15.83■□□□□ 0.12
HLA-DMA-202ENST00000395303 TTLL1O95922 423 aa15.83■□□□□ 0.12
HLA-DMA-202ENST00000395303 NEFLP07196 543 aa15.83■□□□□ 0.12
HLA-DMA-202ENST00000395303 CENPBP07199 599 aaPredicted RBP15.83■□□□□ 0.12
HLA-DMA-202ENST00000395303 IRF5Q13568 498 aa15.83■□□□□ 0.12
HLA-DMA-202ENST00000395303 FAM47AQ5JRC9 791 aa15.83■□□□□ 0.12
HLA-DMA-202ENST00000395303 PPP4R3BQ5MIZ7 849 aa15.83■□□□□ 0.12
HLA-DMA-202ENST00000395303 AKNAD1Q5T1N1 836 aa15.83■□□□□ 0.12
HLA-DMA-202ENST00000395303 ERICH6BQ5W0A0 696 aa15.83■□□□□ 0.12
HLA-DMA-202ENST00000395303 STAG1Q8WVM7 1258 aa15.83■□□□□ 0.12
HLA-DMA-202ENST00000395303 CCDC136Q96JN2 1154 aa15.83■□□□□ 0.12
HLA-DMA-202ENST00000395303 TMEM106CQ9BVX2 250 aa15.83■□□□□ 0.12
HLA-DMA-202ENST00000395303 GABRQQ9UN88 632 aa15.83■□□□□ 0.12
HLA-DMA-202ENST00000395303 ADAMTS5Q9UNA0 930 aa15.83■□□□□ 0.12
HLA-DMA-202ENST00000395303 SMCHD1A6NHR9 2005 aa15.83■□□□□ 0.12
HLA-DMA-202ENST00000395303 PLXNA1Q9UIW2 1896 aa15.82■□□□□ 0.12
HLA-DMA-202ENST00000395303 DSG3P32926 999 aa15.82■□□□□ 0.12
HLA-DMA-202ENST00000395303 NT5C2P49902 561 aa15.82■□□□□ 0.12
HLA-DMA-202ENST00000395303 ATP2B2Q01814 1243 aa15.82■□□□□ 0.12
HLA-DMA-202ENST00000395303 PRKCZQ05513 592 aa15.82■□□□□ 0.12
HLA-DMA-202ENST00000395303 TBC1D10CQ8IV04 446 aa15.82■□□□□ 0.12
HLA-DMA-202ENST00000395303 SPICE1Q8N0Z3 855 aa15.82■□□□□ 0.12
HLA-DMA-202ENST00000395303 GMCL1P1Q8NEA9 526 aa15.82■□□□□ 0.12
HLA-DMA-202ENST00000395303 COA7Q96BR5 231 aa15.82■□□□□ 0.12
HLA-DMA-202ENST00000395303 TANGO6Q9C0B7 1094 aa15.82■□□□□ 0.12
HLA-DMA-202ENST00000395303 IL17RBQ9NRM6 502 aa15.82■□□□□ 0.12
HLA-DMA-202ENST00000395303 TCP11L1Q9NUJ3 509 aa15.82■□□□□ 0.12
HLA-DMA-202ENST00000395303 CLIP2Q9UDT6 1046 aa15.82■□□□□ 0.12
HLA-DMA-202ENST00000395303 GJD2Q9UKL4 321 aa15.82■□□□□ 0.12
HLA-DMA-202ENST00000395303 TSPY2A6NKD2 308 aa15.81■□□□□ 0.12
HLA-DMA-202ENST00000395303 F5H6K3 240 aa15.81■□□□□ 0.12
HLA-DMA-202ENST00000395303 SGSM2O43147 1006 aa15.81■□□□□ 0.12
HLA-DMA-202ENST00000395303 RANBP6O60518 1105 aaKnown RBP15.81■□□□□ 0.12
HLA-DMA-202ENST00000395303 PEX10O60683 326 aa15.81■□□□□ 0.12
HLA-DMA-202ENST00000395303 NDUFB10O96000 172 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms