RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 OS9Q13438 667 aaPredicted RBP19.31■□□□□ 0.68
SNCA-205ENST00000394991 OLFML2BQ68BL8 750 aa19.31■□□□□ 0.68
SNCA-205ENST00000394991 SH3RF1Q7Z6J0 888 aa19.31■□□□□ 0.68
SNCA-205ENST00000394991 MAGEB6Q8N7X4 407 aa19.31■□□□□ 0.68
SNCA-205ENST00000394991 ARRDC4Q8NCT1 418 aa19.31■□□□□ 0.68
SNCA-205ENST00000394991 MYLIPQ8WY64 445 aa19.31■□□□□ 0.68
SNCA-205ENST00000394991 PDLIM7Q9NR12 457 aa19.31■□□□□ 0.68
SNCA-205ENST00000394991 A0A1W2PRG0 241 aa19.3■□□□□ 0.68
SNCA-205ENST00000394991 KBTBD13C9JR72 458 aa19.3■□□□□ 0.68
SNCA-205ENST00000394991 COBLO75128 1261 aa19.3■□□□□ 0.68
SNCA-205ENST00000394991 BCAR3O75815 825 aa19.3■□□□□ 0.68
SNCA-205ENST00000394991 SEPT2Q15019 361 aa19.3■□□□□ 0.68
SNCA-205ENST00000394991 DPP9Q86TI2 863 aa19.3■□□□□ 0.68
SNCA-205ENST00000394991 TTC6Q86TZ1 520 aa19.3■□□□□ 0.68
SNCA-205ENST00000394991 CCDC8Q9H0W5 538 aaPredicted RBP19.3■□□□□ 0.68
SNCA-205ENST00000394991 ANTXR1Q9H6X2 564 aa19.3■□□□□ 0.68
SNCA-205ENST00000394991 CABP5Q9NP86 173 aa19.3■□□□□ 0.68
SNCA-205ENST00000394991 TRIM43BA6NCK2 446 aa19.29■□□□□ 0.68
SNCA-205ENST00000394991 IPO8O15397 1037 aaKnown RBP19.29■□□□□ 0.68
SNCA-205ENST00000394991 SEPT4O43236 478 aa19.29■□□□□ 0.68
SNCA-205ENST00000394991 SURF6O75683 361 aaKnown RBP19.29■□□□□ 0.68
SNCA-205ENST00000394991 TMEM57Q8N5G2 664 aa19.29■□□□□ 0.68
SNCA-205ENST00000394991 FRAT1Q92837 279 aaPredicted RBP19.29■□□□□ 0.68
SNCA-205ENST00000394991 TRIM43Q96BQ3 446 aaPredicted RBP19.29■□□□□ 0.68
SNCA-205ENST00000394991 EAF2Q96CJ1 260 aaPredicted RBP19.29■□□□□ 0.68
SNCA-205ENST00000394991 SPATC1LQ9H0A9 340 aa19.29■□□□□ 0.68
SNCA-205ENST00000394991 BAZ2AQ9UIF9 1905 aaKnown RBP19.28■□□□□ 0.68
SNCA-205ENST00000394991 MYCNP04198 464 aaPredicted RBP19.28■□□□□ 0.68
SNCA-205ENST00000394991 ERCC3P19447 782 aa19.28■□□□□ 0.68
SNCA-205ENST00000394991 ADCYAP1R1P41586 468 aa19.28■□□□□ 0.68
SNCA-205ENST00000394991 SMAD3P84022 425 aaKnown RBP19.28■□□□□ 0.68
SNCA-205ENST00000394991 ATP8B2P98198 1209 aa19.28■□□□□ 0.68
SNCA-205ENST00000394991 GABPAQ06546 454 aa19.28■□□□□ 0.68
SNCA-205ENST00000394991 LRRC41Q15345 812 aa19.28■□□□□ 0.68
SNCA-205ENST00000394991 KIAA1755Q5JYT7 1200 aa19.28■□□□□ 0.68
SNCA-205ENST00000394991 PRAMEF19Q5SWL8 479 aa19.28■□□□□ 0.68
SNCA-205ENST00000394991 CERS3Q8IU89 383 aa19.28■□□□□ 0.68
SNCA-205ENST00000394991 SHCBP1Q8NEM2 672 aa19.28■□□□□ 0.68
SNCA-205ENST00000394991 RIOK1Q9BRS2 568 aaKnown RBP19.28■□□□□ 0.68
SNCA-205ENST00000394991 C1orf115Q9H7X2 142 aa19.28■□□□□ 0.68
SNCA-205ENST00000394991 STRNO43815 780 aa19.27■□□□□ 0.68
SNCA-205ENST00000394991 COG2Q14746 738 aa19.27■□□□□ 0.68
SNCA-205ENST00000394991 FAM47AQ5JRC9 791 aa19.27■□□□□ 0.68
SNCA-205ENST00000394991 FERMT2Q96AC1 680 aa19.27■□□□□ 0.68
SNCA-205ENST00000394991 NOP58Q9Y2X3 529 aaKnown RBP19.27■□□□□ 0.68
SNCA-205ENST00000394991 ITGB8P26012 769 aa19.26■□□□□ 0.67
SNCA-205ENST00000394991 TANGO6Q9C0B7 1094 aa19.26■□□□□ 0.67
SNCA-205ENST00000394991 EPHB4P54760 987 aa19.25■□□□□ 0.67
SNCA-205ENST00000394991 TLE2Q04725 743 aa19.25■□□□□ 0.67
SNCA-205ENST00000394991 C1orf53Q5VUE5 145 aa19.25■□□□□ 0.67
SNCA-205ENST00000394991 MAML3Q96JK9 1138 aa19.25■□□□□ 0.67
SNCA-205ENST00000394991 HOXC10Q9NYD6 342 aa19.25■□□□□ 0.67
SNCA-205ENST00000394991 POLR3DP05423 398 aaPredicted RBP19.24■□□□□ 0.67
SNCA-205ENST00000394991 FOSL2P15408 326 aa19.24■□□□□ 0.67
SNCA-205ENST00000394991 DSG3P32926 999 aa19.24■□□□□ 0.67
SNCA-205ENST00000394991 MAP3K12Q12852 859 aa19.24■□□□□ 0.67
SNCA-205ENST00000394991 PRDM6Q9NQX0 595 aa19.24■□□□□ 0.67
SNCA-205ENST00000394991 PHF24Q9UPV7 400 aa19.24■□□□□ 0.67
SNCA-205ENST00000394991 MYO9BQ13459 2157 aa19.23■□□□□ 0.67
SNCA-205ENST00000394991 MPHOSPH10O00566 681 aaKnown RBP19.23■□□□□ 0.67
SNCA-205ENST00000394991 NCAPG2Q86XI2 1143 aa19.23■□□□□ 0.67
SNCA-205ENST00000394991 CLEC10AQ8IUN9 316 aa19.23■□□□□ 0.67
SNCA-205ENST00000394991 ABRAQ8N0Z2 381 aa19.23■□□□□ 0.67
SNCA-205ENST00000394991 SLC44A5Q8NCS7 719 aa19.23■□□□□ 0.67
SNCA-205ENST00000394991 ATG4CQ96DT6 458 aa19.23■□□□□ 0.67
SNCA-205ENST00000394991 MAGEB6P1A0A0J9YX57 407 aa19.22■□□□□ 0.67
SNCA-205ENST00000394991 CYP2D6P10635 497 aa19.22■□□□□ 0.67
SNCA-205ENST00000394991 PLS1Q14651 629 aa19.22■□□□□ 0.67
SNCA-205ENST00000394991 SIAH1Q8IUQ4 282 aa19.22■□□□□ 0.67
SNCA-205ENST00000394991 MB21D1Q8N884 522 aa19.22■□□□□ 0.67
SNCA-205ENST00000394991 MROH8Q9H579 483 aa19.22■□□□□ 0.67
SNCA-205ENST00000394991 MCM9Q9NXL9 1143 aa19.22■□□□□ 0.67
SNCA-205ENST00000394991 TMED8Q6PL24 325 aaPredicted RBP19.21■□□□□ 0.67
SNCA-205ENST00000394991 RNPC3Q96LT9 517 aaKnown RBP19.21■□□□□ 0.67
SNCA-205ENST00000394991 XPNPEP3Q9NQH7 507 aa19.21■□□□□ 0.67
SNCA-205ENST00000394991 SLC5A4Q9NY91 659 aa19.21■□□□□ 0.67
SNCA-205ENST00000394991 TMEM265A0A087WTH1 108 aa19.2■□□□□ 0.66
SNCA-205ENST00000394991 FLOT1O75955 427 aa19.2■□□□□ 0.66
SNCA-205ENST00000394991 CLTBP09497 229 aa19.2■□□□□ 0.66
SNCA-205ENST00000394991 ZKSCAN2Q63HK3 967 aa19.2■□□□□ 0.66
SNCA-205ENST00000394991 TMEM179Q6ZVK1 233 aa19.2■□□□□ 0.66
SNCA-205ENST00000394991 SPICE1Q8N0Z3 855 aa19.2■□□□□ 0.66
SNCA-205ENST00000394991 PIAS4Q8N2W9 510 aaPredicted RBP19.2■□□□□ 0.66
SNCA-205ENST00000394991 USP38Q8NB14 1042 aa19.2■□□□□ 0.66
SNCA-205ENST00000394991 SDR42E1Q8WUS8 393 aa19.2■□□□□ 0.66
SNCA-205ENST00000394991 CRNKL1Q9BZJ0 848 aaKnown RBP19.2■□□□□ 0.66
SNCA-205ENST00000394991 TACC3Q9Y6A5 838 aa19.2■□□□□ 0.66
SNCA-205ENST00000394991 MCM3APO60318 1980 aa19.2■□□□□ 0.66
SNCA-205ENST00000394991 MYH7P12883 1935 aa19.19■□□□□ 0.66
SNCA-205ENST00000394991 ROBO3Q96MS0 1386 aa19.19■□□□□ 0.66
SNCA-205ENST00000394991 KIAA0355O15063 1070 aa19.19■□□□□ 0.66
SNCA-205ENST00000394991 PGK1P00558 417 aa19.19■□□□□ 0.66
SNCA-205ENST00000394991 FCER1AP12319 257 aa19.19■□□□□ 0.66
SNCA-205ENST00000394991 AKR1B1P15121 316 aa19.19■□□□□ 0.66
SNCA-205ENST00000394991 PDE6AP16499 860 aa19.19■□□□□ 0.66
SNCA-205ENST00000394991 TAL1P17542 331 aaPredicted RBP19.19■□□□□ 0.66
SNCA-205ENST00000394991 TMEM132BQ14DG7 1078 aa19.19■□□□□ 0.66
SNCA-205ENST00000394991 LENG1Q96BZ8 264 aaPredicted RBP19.19■□□□□ 0.66
SNCA-205ENST00000394991 DCP1AQ9NPI6 582 aaPredicted RBP19.19■□□□□ 0.66
SNCA-205ENST00000394991 TMX2Q9Y320 296 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms