RNA–Protein interactions for RNA: ENST00000394939.3

GTF2IRD2B-201, Transcript of GTF2I repeat domain containing 2B, humanhuman

TSL 3

Gene GTF2IRD2B, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD2B-201ENST00000394939 MYH4Q9Y623 1939 aa14.2□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 CCDC69A6NI79 296 aa14.2□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 TRIM75PA6NK02 468 aa14.2□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 SH2B2O14492 632 aaPredicted RBP14.2□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 CPA1P15085 419 aa14.2□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 NOVP48745 357 aa14.2□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 BACE1P56817 501 aa14.2□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 SPP2Q13103 211 aa14.2□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 SNAPC2Q13487 334 aa14.2□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 SEC23AQ15436 765 aa14.2□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 Q6ZUG5 572 aa14.2□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 CATIPQ7Z7H3 387 aa14.2□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 IGDCC4Q8TDY8 1250 aa14.2□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 TCEANC2Q96MN5 208 aa14.2□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 TMEM47Q9BQJ4 181 aa14.2□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 LRRC2Q9BYS8 371 aa14.2□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 KIAA1683Q9H0B3 1180 aa14.2□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 ALDH8A1Q9H2A2 487 aaPredicted RBP14.2□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 TMOD4Q9NZQ9 345 aa14.2□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.2□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 TMX2Q9Y320 296 aa14.2□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 RAD21O60216 631 aa14.19□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 ECE1P42892 770 aa14.19□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 GTF2A2P52657 109 aa14.19□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 MTMR2Q13614 643 aa14.19□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 DEFB115Q30KQ5 88 aa14.19□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 SPRYD7Q5W111 196 aa14.19□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 USP17L2Q6R6M4 530 aa14.19□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 CCDC84Q86UT8 332 aaPredicted RBP14.19□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 SGMS1Q86VZ5 419 aa14.19□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 RASAL3Q86YV0 1011 aa14.19□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 CLEC10AQ8IUN9 316 aa14.19□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 PNMA1Q8ND90 353 aa14.19□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 GMCL1P1Q8NEA9 526 aa14.19□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 NKX2-3Q8TAU0 364 aa14.19□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 ACER1Q8TDN7 264 aa14.19□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 LPAR1Q92633 364 aa14.19□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 KIF2CQ99661 725 aa14.19□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 LY9Q9HBG7 655 aa14.19□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 KCNH4Q9UQ05 1017 aa14.19□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 SLC12A7Q9Y666 1083 aa14.19□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 PHIPQ8WWQ0 1821 aa14.18□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 RASSF10A6NK89 507 aa14.18□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 IRF6O14896 467 aa14.18□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 SLC10A3P09131 477 aa14.18□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 CALM1P0DP23 149 aa14.18□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 CALM2P0DP24 149 aa14.18□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 CALM3P0DP25 149 aa14.18□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 CETPP11597 493 aa14.18□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 RCSD1Q6JBY9 416 aa14.18□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 FASTKD5Q7L8L6 764 aaKnown RBP14.18□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 LRRC47Q8N1G4 583 aaKnown RBP14.18□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 BRF1Q92994 677 aa14.18□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 VCPKMTQ9H867 229 aa14.18□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 A0A1W2PRG0 241 aa14.17□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 MANSC4A6NHS7 340 aaPredicted RBP14.17□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 DDAH1O94760 285 aa14.17□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 MCM2P49736 904 aa14.17□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 HMGCS2P54868 508 aa14.17□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 ZYXQ15942 572 aaKnown RBP14.17□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 SH3D19Q5HYK7 790 aa14.17□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 SLFN13Q68D06 897 aa14.17□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 SIAH1Q8IUQ4 282 aa14.17□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 PROCA1Q8NCQ7 364 aaPredicted RBP14.17□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 AGXT2Q9BYV1 514 aa14.17□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 NAP1L2Q9ULW6 460 aaPredicted RBP14.17□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 A0A0G2JLL6 359 aaPredicted RBP14.16□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 KLF18A0A0U1RQI7 1052 aa14.16□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 F5H6K3 240 aa14.16□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 WDR46O15213 610 aaKnown RBP14.16□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 SLC1A4P43007 532 aa14.16□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 RCAN1P53805 252 aa14.16□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 KLRC3Q07444 240 aa14.16□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 NOGQ13253 232 aa14.16□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 PABPC4Q13310 644 aaKnown RBP eCLIP14.16□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 COL9A3Q14050 684 aaPredicted RBP14.16□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 PRRT2Q7Z6L0 340 aaPredicted RBP14.16□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 ZNF654Q8IZM8 581 aa14.16□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 DCAF4Q8WV16 495 aa14.16□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 GMCL1Q96IK5 515 aa14.16□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 C12orf42Q96LP6 360 aa14.16□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 MAP3K14Q99558 947 aa14.16□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 ISY1Q9ULR0 285 aaKnown RBP14.16□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 ZBTB43O43298 467 aa14.15□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 NDUFB10O96000 172 aa14.15□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 KIF5BP33176 963 aa14.15□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 GJA5P36382 358 aa14.15□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 AK2P54819 239 aa14.15□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 INHBEP58166 350 aa14.15□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 APOBRQ0VD83 1088 aa14.15□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 SREBF2Q12772 1141 aa14.15□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 MKRN3Q13064 507 aaKnown RBP14.15□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 GRM1Q13255 1194 aa14.15□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 TOB2Q14106 344 aaPredicted RBP14.15□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 PPP2R5BQ15173 497 aa14.15□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 CCDC96Q2M329 555 aa14.15□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 OTUD7BQ6GQQ9 843 aa14.15□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 GADL1Q6ZQY3 521 aa14.15□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 CTCFLQ8NI51 663 aaPredicted RBP14.15□□□□□ -0.14
GTF2IRD2B-201ENST00000394939 NUP133Q8WUM0 1156 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms