RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 METTL16Q86W50 562 aaKnown RBP13.13□□□□□ -0.31
UBE2D3-209ENST00000394804 SYNE4Q8N205 404 aa13.13□□□□□ -0.31
UBE2D3-209ENST00000394804 TAF4BQ92750 862 aa13.13□□□□□ -0.31
UBE2D3-209ENST00000394804 PLIN2Q99541 437 aa13.13□□□□□ -0.31
UBE2D3-209ENST00000394804 VAT1LQ9HCJ6 419 aa13.13□□□□□ -0.31
UBE2D3-209ENST00000394804 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.13□□□□□ -0.31
UBE2D3-209ENST00000394804 NAPAP54920 295 aa13.13□□□□□ -0.31
UBE2D3-209ENST00000394804 PTGDRQ13258 359 aa13.13□□□□□ -0.31
UBE2D3-209ENST00000394804 ZBTB9Q96C00 473 aa13.13□□□□□ -0.31
UBE2D3-209ENST00000394804 NLRP3Q96P20 1036 aa13.13□□□□□ -0.31
UBE2D3-209ENST00000394804 MROH7-TTC4A0A0A0MT08 1334 aa13.13□□□□□ -0.31
UBE2D3-209ENST00000394804 TBC1D8BQ0IIM8 1120 aa13.13□□□□□ -0.31
UBE2D3-209ENST00000394804 MORC3Q14149 939 aa13.13□□□□□ -0.31
UBE2D3-209ENST00000394804 WHAMMP3Q1A5X7 153 aa13.13□□□□□ -0.31
UBE2D3-209ENST00000394804 ZNF579Q8NAF0 562 aaKnown RBP13.13□□□□□ -0.31
UBE2D3-209ENST00000394804 RIPOR2Q9Y4F9 1068 aa13.13□□□□□ -0.31
UBE2D3-209ENST00000394804 GTPBP6O43824 516 aaPredicted RBP13.13□□□□□ -0.31
UBE2D3-209ENST00000394804 CASP14P31944 242 aa13.13□□□□□ -0.31
UBE2D3-209ENST00000394804 DDB1Q16531 1140 aa13.13□□□□□ -0.31
UBE2D3-209ENST00000394804 HLFQ16534 295 aa13.13□□□□□ -0.31
UBE2D3-209ENST00000394804 PANX2Q96RD6 677 aa13.13□□□□□ -0.31
UBE2D3-209ENST00000394804 CEP89Q96ST8 783 aa13.13□□□□□ -0.31
UBE2D3-209ENST00000394804 PLA2G12BQ9BX93 195 aa13.13□□□□□ -0.31
UBE2D3-209ENST00000394804 INCENPQ9NQS7 918 aa13.13□□□□□ -0.31
UBE2D3-209ENST00000394804 COL15A1P39059 1388 aa13.13□□□□□ -0.31
UBE2D3-209ENST00000394804 SHTN1A0MZ66 631 aa13.12□□□□□ -0.31
UBE2D3-209ENST00000394804 KCNJ18B7U540 433 aa13.12□□□□□ -0.31
UBE2D3-209ENST00000394804 USP17L12C9JPN9 530 aa13.12□□□□□ -0.31
UBE2D3-209ENST00000394804 USP17L21D6R901 530 aa13.12□□□□□ -0.31
UBE2D3-209ENST00000394804 IL6STP40189 918 aaPredicted RBP13.12□□□□□ -0.31
UBE2D3-209ENST00000394804 KCNJ12Q14500 433 aa13.12□□□□□ -0.31
UBE2D3-209ENST00000394804 RGPD1P0DJD0 1748 aa13.12□□□□□ -0.31
UBE2D3-209ENST00000394804 KIAA0754O94854 1291 aa13.12□□□□□ -0.31
UBE2D3-209ENST00000394804 CLSTN1O94985 981 aa13.12□□□□□ -0.31
UBE2D3-209ENST00000394804 RBL2Q08999 1139 aa13.12□□□□□ -0.31
UBE2D3-209ENST00000394804 STAG1Q8WVM7 1258 aa13.12□□□□□ -0.31
UBE2D3-209ENST00000394804 PIGBQ92521 554 aa13.12□□□□□ -0.31
UBE2D3-209ENST00000394804 PODXL2Q9NZ53 605 aa13.12□□□□□ -0.31
UBE2D3-209ENST00000394804 SALL1Q9NSC2 1324 aa13.12□□□□□ -0.31
UBE2D3-209ENST00000394804 CCDC151A5D8V7 595 aa13.12□□□□□ -0.31
UBE2D3-209ENST00000394804 PPP1R2P41236 205 aa13.12□□□□□ -0.31
UBE2D3-209ENST00000394804 MATR3P43243 847 aaKnown RBP eCLIP13.12□□□□□ -0.31
UBE2D3-209ENST00000394804 GSTO1P78417 241 aa13.12□□□□□ -0.31
UBE2D3-209ENST00000394804 CCDC40Q4G0X9 1142 aa13.12□□□□□ -0.31
UBE2D3-209ENST00000394804 NBPF11Q86T75 865 aa13.12□□□□□ -0.31
UBE2D3-209ENST00000394804 FBXL16Q8N461 479 aa13.12□□□□□ -0.31
UBE2D3-209ENST00000394804 CSGALNACT2Q8N6G5 542 aa13.12□□□□□ -0.31
UBE2D3-209ENST00000394804 AATFQ9NY61 560 aaKnown RBP eCLIP13.12□□□□□ -0.316e-12■■□□□ 12.2
UBE2D3-209ENST00000394804 SOWAHDA6NJG2 315 aa13.11□□□□□ -0.31
UBE2D3-209ENST00000394804 DDAH1O94760 285 aa13.11□□□□□ -0.31
UBE2D3-209ENST00000394804 NBPF5PQ86XG9 351 aaPredicted RBP13.11□□□□□ -0.31
UBE2D3-209ENST00000394804 OR8K1Q8NGG5 319 aa13.11□□□□□ -0.31
UBE2D3-209ENST00000394804 DRC1Q96MC2 740 aa13.11□□□□□ -0.31
UBE2D3-209ENST00000394804 C6orf50Q9HD87 102 aa13.11□□□□□ -0.31
UBE2D3-209ENST00000394804 MEGF6O75095 1541 aa13.11□□□□□ -0.31
UBE2D3-209ENST00000394804 PCP11498 1178 aaKnown RBP13.11□□□□□ -0.31
UBE2D3-209ENST00000394804 IKQ13123 557 aaPredicted RBP13.11□□□□□ -0.31
UBE2D3-209ENST00000394804 FAM98CQ17RN3 349 aaKnown RBP13.11□□□□□ -0.31
UBE2D3-209ENST00000394804 SMYD4Q8IYR2 804 aaPredicted RBP13.11□□□□□ -0.31
UBE2D3-209ENST00000394804 LRRC27Q9C0I9 530 aa13.11□□□□□ -0.31
UBE2D3-209ENST00000394804 MMRN2Q9H8L6 949 aa13.11□□□□□ -0.31
UBE2D3-209ENST00000394804 FOXN1O15353 648 aa13.11□□□□□ -0.31
UBE2D3-209ENST00000394804 SCG2P13521 617 aa13.11□□□□□ -0.31
UBE2D3-209ENST00000394804 DNA2P51530 1060 aa13.11□□□□□ -0.31
UBE2D3-209ENST00000394804 COPB1P53618 953 aaKnown RBP13.11□□□□□ -0.31
UBE2D3-209ENST00000394804 CHRNDQ07001 517 aa13.11□□□□□ -0.31
UBE2D3-209ENST00000394804 LONRF2Q1L5Z9 754 aa13.11□□□□□ -0.31
UBE2D3-209ENST00000394804 NEK11Q8NG66 645 aa13.11□□□□□ -0.31
UBE2D3-209ENST00000394804 PARD6BQ9BYG5 372 aa13.11□□□□□ -0.31
UBE2D3-209ENST00000394804 L2HGDHQ9H9P8 463 aa13.11□□□□□ -0.31
UBE2D3-209ENST00000394804 ERVV-1B6SEH8 477 aa13.1□□□□□ -0.31
UBE2D3-209ENST00000394804 GYG1P46976 350 aa13.1□□□□□ -0.31
UBE2D3-209ENST00000394804 TOGARAM2Q6ZUX3 1019 aa13.1□□□□□ -0.31
UBE2D3-209ENST00000394804 SLC35F6Q8N357 371 aa13.1□□□□□ -0.31
UBE2D3-209ENST00000394804 RGS22Q8NE09 1264 aa13.1□□□□□ -0.31
UBE2D3-209ENST00000394804 JAKMIP2Q96AA8 810 aa13.1□□□□□ -0.31
UBE2D3-209ENST00000394804 EPSTI1Q96J88 318 aa13.1□□□□□ -0.31
UBE2D3-209ENST00000394804 MTA3Q9BTC8 594 aa13.1□□□□□ -0.31
UBE2D3-209ENST00000394804 NUP58Q9BVL2 599 aa13.1□□□□□ -0.31
UBE2D3-209ENST00000394804 FAM107BQ9H098 131 aa13.1□□□□□ -0.31
UBE2D3-209ENST00000394804 H7C1D1 291 aa13.1□□□□□ -0.31
UBE2D3-209ENST00000394804 CSF1RP07333 972 aa13.1□□□□□ -0.31
UBE2D3-209ENST00000394804 PDE4DQ08499 809 aa13.1□□□□□ -0.31
UBE2D3-209ENST00000394804 IGDCC4Q8TDY8 1250 aa13.1□□□□□ -0.31
UBE2D3-209ENST00000394804 ZFP91Q96JP5 570 aaPredicted RBP13.1□□□□□ -0.31
UBE2D3-209ENST00000394804 SEC31BQ9NQW1 1179 aa13.1□□□□□ -0.31
UBE2D3-209ENST00000394804 TADA3O75528 432 aa13.1□□□□□ -0.31
UBE2D3-209ENST00000394804 PRR29P0C7W0 189 aa13.1□□□□□ -0.31
UBE2D3-209ENST00000394804 GNA11P29992 359 aa13.1□□□□□ -0.31
UBE2D3-209ENST00000394804 NOC4LQ9BVI4 516 aaKnown RBP13.1□□□□□ -0.31
UBE2D3-209ENST00000394804 ANKRD2Q9GZV1 360 aa13.1□□□□□ -0.31
UBE2D3-209ENST00000394804 MYO6Q9UM54 1294 aa13.1□□□□□ -0.31
UBE2D3-209ENST00000394804 HIBADHP31937 336 aaKnown RBP13.1□□□□□ -0.31
UBE2D3-209ENST00000394804 TRAPPC10P48553 1259 aa13.1□□□□□ -0.31
UBE2D3-209ENST00000394804 RCAN1P53805 252 aa13.1□□□□□ -0.31
UBE2D3-209ENST00000394804 FAM47AQ5JRC9 791 aa13.1□□□□□ -0.31
UBE2D3-209ENST00000394804 PAGE5Q96GU1 130 aa13.1□□□□□ -0.31
UBE2D3-209ENST00000394804 RSPH14Q9UHP6 348 aa13.1□□□□□ -0.31
UBE2D3-209ENST00000394804 ARID4AP29374 1257 aaPredicted RBP13.09□□□□□ -0.31
UBE2D3-209ENST00000394804 MAPK8IP2Q13387 824 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms