RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 N4BP3O15049 544 aa11.36□□□□□ -0.59
UBE2D3-208ENST00000394803 ATP2C1P98194 919 aaPredicted RBP11.36□□□□□ -0.59
UBE2D3-208ENST00000394803 SLC20A2Q08357 652 aa11.36□□□□□ -0.59
UBE2D3-208ENST00000394803 PAK1Q13153 545 aa11.36□□□□□ -0.59
UBE2D3-208ENST00000394803 SEC23AQ15436 765 aa11.36□□□□□ -0.59
UBE2D3-208ENST00000394803 MAP9Q49MG5 647 aa11.36□□□□□ -0.59
UBE2D3-208ENST00000394803 HSP90B2PQ58FF3 399 aa11.36□□□□□ -0.59
UBE2D3-208ENST00000394803 TTC38Q5R3I4 469 aa11.36□□□□□ -0.59
UBE2D3-208ENST00000394803 ARL6IP4Q66PJ3 421 aaKnown RBP11.36□□□□□ -0.59
UBE2D3-208ENST00000394803 KLHL10Q6JEL2 608 aa11.36□□□□□ -0.59
UBE2D3-208ENST00000394803 APTXQ7Z2E3 356 aaKnown RBP11.36□□□□□ -0.59
UBE2D3-208ENST00000394803 LCORLQ8N3X6 602 aa11.36□□□□□ -0.59
UBE2D3-208ENST00000394803 GOLGA5Q8TBA6 731 aa11.36□□□□□ -0.59
UBE2D3-208ENST00000394803 ZSCAN10Q96SZ4 725 aaPredicted RBP11.36□□□□□ -0.59
UBE2D3-208ENST00000394803 BRIP1Q9BX63 1249 aa11.36□□□□□ -0.59
UBE2D3-208ENST00000394803 LZTFL1Q9NQ48 299 aa11.36□□□□□ -0.59
UBE2D3-208ENST00000394803 LAMB2P55268 1798 aa11.36□□□□□ -0.59
UBE2D3-208ENST00000394803 LTBP4Q8N2S1 1624 aa11.35□□□□□ -0.59
UBE2D3-208ENST00000394803 IVLP07476 585 aa11.35□□□□□ -0.59
UBE2D3-208ENST00000394803 ATP2B1P20020 1258 aa11.35□□□□□ -0.59
UBE2D3-208ENST00000394803 CYP7A1P22680 504 aa11.35□□□□□ -0.59
UBE2D3-208ENST00000394803 CALML3P27482 149 aa11.35□□□□□ -0.59
UBE2D3-208ENST00000394803 AFMP43652 599 aa11.35□□□□□ -0.59
UBE2D3-208ENST00000394803 GRIN1Q05586 938 aa11.35□□□□□ -0.59
UBE2D3-208ENST00000394803 STIM1Q13586 685 aa11.35□□□□□ -0.59
UBE2D3-208ENST00000394803 LEKR1Q6ZMV7 388 aa11.35□□□□□ -0.59
UBE2D3-208ENST00000394803 BRINP3Q76B58 766 aa11.35□□□□□ -0.59
UBE2D3-208ENST00000394803 NOC3LQ8WTT2 800 aaKnown RBP11.35□□□□□ -0.59
UBE2D3-208ENST00000394803 ZKSCAN3Q9BRR0 538 aa11.35□□□□□ -0.59
UBE2D3-208ENST00000394803 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.35□□□□□ -0.59
UBE2D3-208ENST00000394803 BCL9O00512 1426 aa11.35□□□□□ -0.59
UBE2D3-208ENST00000394803 PPP1R3GB7ZBB8 358 aa11.35□□□□□ -0.59
UBE2D3-208ENST00000394803 CASP14P31944 242 aa11.35□□□□□ -0.59
UBE2D3-208ENST00000394803 LONP1P36776 959 aaKnown RBP11.35□□□□□ -0.59
UBE2D3-208ENST00000394803 ZNF658Q5TYW1 1059 aaPredicted RBP11.35□□□□□ -0.59
UBE2D3-208ENST00000394803 RAD9BQ6WBX8 426 aa11.35□□□□□ -0.59
UBE2D3-208ENST00000394803 GRAMD1CQ8IYS0 662 aa11.35□□□□□ -0.59
UBE2D3-208ENST00000394803 CTCFLQ8NI51 663 aaPredicted RBP11.35□□□□□ -0.59
UBE2D3-208ENST00000394803 OXER1Q8TDS5 423 aa11.35□□□□□ -0.59
UBE2D3-208ENST00000394803 DUOX1Q9NRD9 1551 aa11.34□□□□□ -0.59
UBE2D3-208ENST00000394803 RREB1Q92766 1687 aa11.34□□□□□ -0.59
UBE2D3-208ENST00000394803 H7C1D1 291 aa11.34□□□□□ -0.59
UBE2D3-208ENST00000394803 TEX33O43247 280 aa11.34□□□□□ -0.59
UBE2D3-208ENST00000394803 SASH3O75995 380 aa11.34□□□□□ -0.59
UBE2D3-208ENST00000394803 PPP1R2P41236 205 aa11.34□□□□□ -0.59
UBE2D3-208ENST00000394803 RRAGBQ5VZM2 374 aa11.34□□□□□ -0.59
UBE2D3-208ENST00000394803 SYNE4Q8N205 404 aa11.34□□□□□ -0.59
UBE2D3-208ENST00000394803 NKX2-3Q8TAU0 364 aa11.34□□□□□ -0.59
UBE2D3-208ENST00000394803 IQCDQ96DY2 449 aa11.34□□□□□ -0.59
UBE2D3-208ENST00000394803 NUP88Q99567 741 aaPredicted RBP11.34□□□□□ -0.59
UBE2D3-208ENST00000394803 MED4Q9NPJ6 270 aa11.34□□□□□ -0.59
UBE2D3-208ENST00000394803 ABHD10Q9NUJ1 306 aa11.34□□□□□ -0.59
UBE2D3-208ENST00000394803 CTNND2Q9UQB3 1225 aa11.34□□□□□ -0.59
UBE2D3-208ENST00000394803 A0A1W2PQC6 194 aa11.33□□□□□ -0.59
UBE2D3-208ENST00000394803 TULP2O00295 520 aa11.33□□□□□ -0.59
UBE2D3-208ENST00000394803 GYPCP04921 128 aa11.33□□□□□ -0.59
UBE2D3-208ENST00000394803 KIF5BP33176 963 aa11.33□□□□□ -0.59
UBE2D3-208ENST00000394803 COPB1P53618 953 aaKnown RBP11.33□□□□□ -0.59
UBE2D3-208ENST00000394803 HNRNPH2P55795 449 aaKnown RBP11.33□□□□□ -0.59
UBE2D3-208ENST00000394803 CKAP4Q07065 602 aaKnown RBP11.33□□□□□ -0.59
UBE2D3-208ENST00000394803 IQCEQ6IPM2 695 aa11.33□□□□□ -0.59
UBE2D3-208ENST00000394803 CCDC82Q8N4S0 544 aa11.33□□□□□ -0.59
UBE2D3-208ENST00000394803 GOLGA6L1Q8N7Z2 621 aa11.33□□□□□ -0.59
UBE2D3-208ENST00000394803 CPLX3Q8WVH0 158 aa11.33□□□□□ -0.59
UBE2D3-208ENST00000394803 CCDC47Q96A33 483 aaKnown RBP11.33□□□□□ -0.59
UBE2D3-208ENST00000394803 MED15Q96RN5 788 aa11.33□□□□□ -0.59
UBE2D3-208ENST00000394803 HAUS4Q9H6D7 363 aa11.33□□□□□ -0.59
UBE2D3-208ENST00000394803 INCENPQ9NQS7 918 aa11.33□□□□□ -0.59
UBE2D3-208ENST00000394803 VPS54Q9P1Q0 977 aa11.33□□□□□ -0.59
UBE2D3-208ENST00000394803 MINDY4BA8MYZ0 360 aa11.33□□□□□ -0.6
UBE2D3-208ENST00000394803 PRKAB2O43741 272 aa11.33□□□□□ -0.6
UBE2D3-208ENST00000394803 IPO7O95373 1038 aaKnown RBP11.33□□□□□ -0.6
UBE2D3-208ENST00000394803 EEF1GP26641 437 aaKnown RBP11.33□□□□□ -0.6
UBE2D3-208ENST00000394803 KRT83P78385 493 aa11.33□□□□□ -0.6
UBE2D3-208ENST00000394803 KRT31Q15323 416 aa11.33□□□□□ -0.6
UBE2D3-208ENST00000394803 PKN1Q16512 942 aa11.33□□□□□ -0.6
UBE2D3-208ENST00000394803 ZNF662Q6ZS27 426 aa11.33□□□□□ -0.6
UBE2D3-208ENST00000394803 TMTC3Q6ZXV5 915 aa11.33□□□□□ -0.6
UBE2D3-208ENST00000394803 FAM71BQ8TC56 605 aa11.33□□□□□ -0.6
UBE2D3-208ENST00000394803 EPSTI1Q96J88 318 aa11.33□□□□□ -0.6
UBE2D3-208ENST00000394803 SH3GLB2Q9NR46 395 aa11.33□□□□□ -0.6
UBE2D3-208ENST00000394803 UBE2Q2LH0YL09 131 aa11.32□□□□□ -0.6
UBE2D3-208ENST00000394803 FGRP09769 529 aa11.32□□□□□ -0.6
UBE2D3-208ENST00000394803 CD44P16070 742 aaKnown RBP11.32□□□□□ -0.6
UBE2D3-208ENST00000394803 STX17P56962 302 aa11.32□□□□□ -0.6
UBE2D3-208ENST00000394803 MTF1Q14872 753 aa11.32□□□□□ -0.6
UBE2D3-208ENST00000394803 ZSCAN26Q16670 478 aa11.32□□□□□ -0.6
UBE2D3-208ENST00000394803 CCDC178Q5BJE1 867 aa11.32□□□□□ -0.6
UBE2D3-208ENST00000394803 TCP11X2Q5H9J9 407 aa11.32□□□□□ -0.6
UBE2D3-208ENST00000394803 BEND6Q5SZJ8 279 aaPredicted RBP11.32□□□□□ -0.6
UBE2D3-208ENST00000394803 WWC2Q6AWC2 1192 aa11.32□□□□□ -0.6
UBE2D3-208ENST00000394803 CCDC70Q6NSX1 233 aa11.32□□□□□ -0.6
UBE2D3-208ENST00000394803 WDR93Q6P2C0 686 aa11.32□□□□□ -0.6
UBE2D3-208ENST00000394803 SLC35F6Q8N357 371 aa11.32□□□□□ -0.6
UBE2D3-208ENST00000394803 ENAHQ8N8S7 591 aaPredicted RBP11.32□□□□□ -0.6
UBE2D3-208ENST00000394803 HELBQ8NG08 1087 aaPredicted RBP11.32□□□□□ -0.6
UBE2D3-208ENST00000394803 NUP58Q9BVL2 599 aa11.32□□□□□ -0.6
UBE2D3-208ENST00000394803 ANKZF1Q9H8Y5 726 aa11.32□□□□□ -0.6
UBE2D3-208ENST00000394803 VIPAS39Q9H9C1 493 aa11.32□□□□□ -0.6
UBE2D3-208ENST00000394803 MAGEF1Q9HAY2 307 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 199.1 ms