RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 DHX58Q96C10 678 aa20.88■□□□□ 0.93
PCDHA1-202ENST00000394633 SETDB2Q96T68 719 aa20.88■□□□□ 0.93
PCDHA1-202ENST00000394633 AATFQ9NY61 560 aaKnown RBP eCLIP20.88■□□□□ 0.93
PCDHA1-202ENST00000394633 AKR1B15C9JRZ8 316 aaPredicted RBP20.88■□□□□ 0.93
PCDHA1-202ENST00000394633 CD44P16070 742 aaKnown RBP20.88■□□□□ 0.93
PCDHA1-202ENST00000394633 BCAMP50895 628 aa20.88■□□□□ 0.93
PCDHA1-202ENST00000394633 GPR161Q8N6U8 529 aaKnown RBP20.88■□□□□ 0.93
PCDHA1-202ENST00000394633 MYH8P13535 1937 aa20.87■□□□□ 0.93
PCDHA1-202ENST00000394633 SOWAHDA6NJG2 315 aa20.87■□□□□ 0.93
PCDHA1-202ENST00000394633 RGL2O15211 777 aa20.87■□□□□ 0.93
PCDHA1-202ENST00000394633 PPARAQ07869 468 aa20.87■□□□□ 0.93
PCDHA1-202ENST00000394633 SEC23AQ15436 765 aa20.87■□□□□ 0.93
PCDHA1-202ENST00000394633 EARS2Q5JPH6 523 aaKnown RBP20.87■□□□□ 0.93
PCDHA1-202ENST00000394633 TEX35Q5T0J7 233 aa20.87■□□□□ 0.93
PCDHA1-202ENST00000394633 CC2D1AQ6P1N0 951 aaPredicted RBP20.87■□□□□ 0.93
PCDHA1-202ENST00000394633 EPSTI1Q96J88 318 aa20.87■□□□□ 0.93
PCDHA1-202ENST00000394633 PANX2Q96RD6 677 aa20.87■□□□□ 0.93
PCDHA1-202ENST00000394633 RNF41Q9H4P4 317 aaPredicted RBP20.87■□□□□ 0.93
PCDHA1-202ENST00000394633 ERICH4A6NGS2 130 aa20.86■□□□□ 0.93
PCDHA1-202ENST00000394633 ATP8B1O43520 1251 aa20.86■□□□□ 0.93
PCDHA1-202ENST00000394633 SASH3O75995 380 aa20.86■□□□□ 0.93
PCDHA1-202ENST00000394633 TBC1D8O95759 1140 aa20.86■□□□□ 0.93
PCDHA1-202ENST00000394633 CUL4BQ13620 913 aa20.86■□□□□ 0.93
PCDHA1-202ENST00000394633 SPATA1Q5VX52 437 aa20.86■□□□□ 0.93
PCDHA1-202ENST00000394633 SH3RF1Q7Z6J0 888 aa20.86■□□□□ 0.93
PCDHA1-202ENST00000394633 UBAC1Q9BSL1 405 aa20.86■□□□□ 0.93
PCDHA1-202ENST00000394633 RNF26Q9BY78 433 aaPredicted RBP20.86■□□□□ 0.93
PCDHA1-202ENST00000394633 BAZ2AQ9UIF9 1905 aaKnown RBP20.86■□□□□ 0.93
PCDHA1-202ENST00000394633 TRIM75PA6NK02 468 aa20.86■□□□□ 0.93
PCDHA1-202ENST00000394633 ADRA2BP18089 450 aa20.86■□□□□ 0.93
PCDHA1-202ENST00000394633 CASP1P29466 404 aa20.86■□□□□ 0.93
PCDHA1-202ENST00000394633 AFMP43652 599 aa20.86■□□□□ 0.93
PCDHA1-202ENST00000394633 NFIXQ14938 502 aa20.86■□□□□ 0.93
PCDHA1-202ENST00000394633 PKN1Q16512 942 aa20.86■□□□□ 0.93
PCDHA1-202ENST00000394633 IRX2Q9BZI1 471 aaPredicted RBP20.86■□□□□ 0.93
PCDHA1-202ENST00000394633 UBXN6Q9BZV1 441 aa20.86■□□□□ 0.93
PCDHA1-202ENST00000394633 VPS54Q9P1Q0 977 aa20.86■□□□□ 0.93
PCDHA1-202ENST00000394633 TNKSO95271 1327 aa20.85■□□□□ 0.93
PCDHA1-202ENST00000394633 SYNRGQ9UMZ2 1314 aa20.85■□□□□ 0.93
PCDHA1-202ENST00000394633 CCDC66A2RUB6 948 aa20.85■□□□□ 0.93
PCDHA1-202ENST00000394633 GYS1P13807 737 aa20.85■□□□□ 0.93
PCDHA1-202ENST00000394633 CYP2C19P33261 490 aa20.85■□□□□ 0.93
PCDHA1-202ENST00000394633 PBX1P40424 430 aa20.85■□□□□ 0.93
PCDHA1-202ENST00000394633 STX17P56962 302 aa20.85■□□□□ 0.93
PCDHA1-202ENST00000394633 RAD9BQ6WBX8 426 aa20.85■□□□□ 0.93
PCDHA1-202ENST00000394633 NBPF5PQ86XG9 351 aaPredicted RBP20.85■□□□□ 0.93
PCDHA1-202ENST00000394633 CCDC12Q8WUD4 166 aaPredicted RBP20.85■□□□□ 0.93
PCDHA1-202ENST00000394633 PAGE5Q96GU1 130 aa20.85■□□□□ 0.93
PCDHA1-202ENST00000394633 MYH13Q9UKX3 1938 aa20.85■□□□□ 0.93
PCDHA1-202ENST00000394633 DLEC1Q9Y238 1755 aa20.85■□□□□ 0.93
PCDHA1-202ENST00000394633 SMIM22K7EJ46 135 aa20.85■□□□□ 0.93
PCDHA1-202ENST00000394633 CCDC175P0C221 793 aa20.85■□□□□ 0.93
PCDHA1-202ENST00000394633 RBL2Q08999 1139 aa20.85■□□□□ 0.93
PCDHA1-202ENST00000394633 CT47A1Q5JQC4 288 aaPredicted RBP20.85■□□□□ 0.93
PCDHA1-202ENST00000394633 KLHL10Q6JEL2 608 aa20.85■□□□□ 0.93
PCDHA1-202ENST00000394633 ADD3Q9UEY8 706 aaKnown RBP20.85■□□□□ 0.93
PCDHA1-202ENST00000394633 RTL9Q8NET4 1388 aa20.85■□□□□ 0.93
PCDHA1-202ENST00000394633 WNT7AO00755 349 aa20.84■□□□□ 0.93
PCDHA1-202ENST00000394633 CDKAL1Q5VV42 579 aa20.84■□□□□ 0.93
PCDHA1-202ENST00000394633 ADGRA1Q86SQ6 560 aa20.84■□□□□ 0.93
PCDHA1-202ENST00000394633 IGSF22Q8N9C0 903 aa20.84■□□□□ 0.93
PCDHA1-202ENST00000394633 SDR42E1Q8WUS8 393 aa20.84■□□□□ 0.93
PCDHA1-202ENST00000394633 RABGGTAQ92696 567 aa20.84■□□□□ 0.93
PCDHA1-202ENST00000394633 PHF20Q9BVI0 1012 aa20.84■□□□□ 0.93
PCDHA1-202ENST00000394633 PARD6BQ9BYG5 372 aa20.84■□□□□ 0.93
PCDHA1-202ENST00000394633 LRP2BPQ9P2M1 347 aa20.84■□□□□ 0.93
PCDHA1-202ENST00000394633 ADGRG1Q9Y653 693 aa20.84■□□□□ 0.93
PCDHA1-202ENST00000394633 MINDY4BA8MYZ0 360 aa20.84■□□□□ 0.93
PCDHA1-202ENST00000394633 GTF2E1P29083 439 aaPredicted RBP20.84■□□□□ 0.93
PCDHA1-202ENST00000394633 SYMPKQ92797 1274 aaKnown RBP20.84■□□□□ 0.93
PCDHA1-202ENST00000394633 DUOX1Q9NRD9 1551 aa20.83■□□□□ 0.93
PCDHA1-202ENST00000394633 TNRC6CQ9HCJ0 1690 aaKnown RBP20.83■□□□□ 0.93
PCDHA1-202ENST00000394633 A0A0U1RQJ8 604 aa20.83■□□□□ 0.93
PCDHA1-202ENST00000394633 PRDM1O75626 825 aa20.83■□□□□ 0.93
PCDHA1-202ENST00000394633 KRT2P35908 639 aa20.83■□□□□ 0.93
PCDHA1-202ENST00000394633 FUT2Q10981 343 aa20.83■□□□□ 0.93
PCDHA1-202ENST00000394633 DPYDQ12882 1025 aa20.83■□□□□ 0.93
PCDHA1-202ENST00000394633 CCDC152Q4G0S7 254 aa20.83■□□□□ 0.93
PCDHA1-202ENST00000394633 ATRIPQ8WXE1 791 aa20.83■□□□□ 0.93
PCDHA1-202ENST00000394633 GOLGA1Q92805 767 aa20.83■□□□□ 0.93
PCDHA1-202ENST00000394633 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.83■□□□□ 0.93
PCDHA1-202ENST00000394633 hCG_1642624A0A1W2PR95 340 aa20.82■□□□□ 0.92
PCDHA1-202ENST00000394633 CYP7A1P22680 504 aa20.82■□□□□ 0.92
PCDHA1-202ENST00000394633 AKAP17AQ02040 695 aaKnown RBP20.82■□□□□ 0.92
PCDHA1-202ENST00000394633 PPFIBP1Q86W92 1011 aa20.82■□□□□ 0.92
PCDHA1-202ENST00000394633 SMYD4Q8IYR2 804 aaPredicted RBP20.82■□□□□ 0.92
PCDHA1-202ENST00000394633 CPLX3Q8WVH0 158 aa20.82■□□□□ 0.92
PCDHA1-202ENST00000394633 AKT1S1Q96B36 256 aa20.82■□□□□ 0.92
PCDHA1-202ENST00000394633 LZTFL1Q9NQ48 299 aa20.82■□□□□ 0.92
PCDHA1-202ENST00000394633 TFCP2L1Q9NZI6 479 aa20.82■□□□□ 0.92
PCDHA1-202ENST00000394633 ANAPC4Q9UJX5 808 aa20.82■□□□□ 0.92
PCDHA1-202ENST00000394633 PPP1R3GB7ZBB8 358 aa20.82■□□□□ 0.92
PCDHA1-202ENST00000394633 POLR3GO15318 223 aaPredicted RBP20.82■□□□□ 0.92
PCDHA1-202ENST00000394633 ESR2Q92731 530 aa20.82■□□□□ 0.92
PCDHA1-202ENST00000394633 CCDC34Q96HJ3 373 aa20.82■□□□□ 0.92
PCDHA1-202ENST00000394633 NAA15Q9BXJ9 866 aaKnown RBP20.82■□□□□ 0.92
PCDHA1-202ENST00000394633 XBP1P17861 261 aa20.81■□□□□ 0.92
PCDHA1-202ENST00000394633 PPP2R5BQ15173 497 aa20.81■□□□□ 0.92
PCDHA1-202ENST00000394633 ENAHQ8N8S7 591 aaPredicted RBP20.81■□□□□ 0.92
PCDHA1-202ENST00000394633 PRPF3O43395 683 aaKnown RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms