RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 IFFO1Q0D2I5 559 aa9.93□□□□□ -0.82
RTN4-206ENST00000394611 KBTBD3Q8NAB2 608 aa9.93□□□□□ -0.82
RTN4-206ENST00000394611 EPSTI1Q96J88 318 aa9.93□□□□□ -0.82
RTN4-206ENST00000394611 UBA5Q9GZZ9 404 aa9.93□□□□□ -0.82
RTN4-206ENST00000394611 FAM207AQ9NSI2 230 aaPredicted RBP9.93□□□□□ -0.82
RTN4-206ENST00000394611 ZNF185O15231 689 aa9.93□□□□□ -0.82
RTN4-206ENST00000394611 RNF113AO15541 343 aaKnown RBP9.93□□□□□ -0.82
RTN4-206ENST00000394611 HSF2BPO75031 334 aa9.93□□□□□ -0.82
RTN4-206ENST00000394611 PAFAH1B1P43034 410 aa9.93□□□□□ -0.82
RTN4-206ENST00000394611 NAA16Q6N069 864 aaPredicted RBP9.93□□□□□ -0.82
RTN4-206ENST00000394611 ZNF496Q96IT1 587 aaPredicted RBP9.93□□□□□ -0.82
RTN4-206ENST00000394611 MYCBPQ99417 103 aaPredicted RBP9.93□□□□□ -0.82
RTN4-206ENST00000394611 M0R2C6 588 aa9.92□□□□□ -0.82
RTN4-206ENST00000394611 ZFYVE27Q5T4F4 411 aa9.92□□□□□ -0.82
RTN4-206ENST00000394611 PRPF38AQ8NAV1 312 aaKnown RBP9.92□□□□□ -0.82
RTN4-206ENST00000394611 RABGGTAQ92696 567 aa9.92□□□□□ -0.82
RTN4-206ENST00000394611 LBHD1Q9BQE6 289 aaPredicted RBP9.92□□□□□ -0.82
RTN4-206ENST00000394611 E7EVH7 732 aa9.92□□□□□ -0.82
RTN4-206ENST00000394611 FMR1Q06787 632 aaKnown RBP eCLIP9.92□□□□□ -0.825e-11■□□□□ 8.4
RTN4-206ENST00000394611 IFT88Q13099 833 aa9.92□□□□□ -0.82
RTN4-206ENST00000394611 RTN1Q16799 776 aa9.92□□□□□ -0.82
RTN4-206ENST00000394611 SMCR8Q8TEV9 937 aaPredicted RBP9.92□□□□□ -0.82
RTN4-206ENST00000394611 BAIAP2L1Q9UHR4 511 aa9.92□□□□□ -0.82
RTN4-206ENST00000394611 LUC7L2Q9Y383 392 aaKnown RBP9.92□□□□□ -0.82
RTN4-206ENST00000394611 OSBP2Q969R2 916 aa9.92□□□□□ -0.82
RTN4-206ENST00000394611 ARMT1Q9H993 441 aa9.92□□□□□ -0.82
RTN4-206ENST00000394611 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.92□□□□□ -0.828e-8■■■■■ 43.4
RTN4-206ENST00000394611 MYO6Q9UM54 1294 aa9.92□□□□□ -0.82
RTN4-206ENST00000394611 KDM3BQ7LBC6 1761 aa9.91□□□□□ -0.82
RTN4-206ENST00000394611 H2AFXP16104 143 aaPredicted RBP9.91□□□□□ -0.82
RTN4-206ENST00000394611 TYW1BQ6NUM6 668 aa9.91□□□□□ -0.82
RTN4-206ENST00000394611 VSTM4Q8IW00 320 aa9.91□□□□□ -0.82
RTN4-206ENST00000394611 CDC23Q9UJX2 597 aa9.91□□□□□ -0.82
RTN4-206ENST00000394611 GGCXP38435 758 aa9.91□□□□□ -0.82
RTN4-206ENST00000394611 IFIT5Q13325 482 aaKnown RBP9.91□□□□□ -0.82
RTN4-206ENST00000394611 GCKRQ14397 625 aa9.91□□□□□ -0.82
RTN4-206ENST00000394611 SYCP1Q15431 976 aa9.91□□□□□ -0.82
RTN4-206ENST00000394611 CCDC91Q7Z6B0 441 aa9.91□□□□□ -0.82
RTN4-206ENST00000394611 PACS2Q86VP3 889 aa9.91□□□□□ -0.82
RTN4-206ENST00000394611 DYDC1Q8WWB3 177 aa9.91□□□□□ -0.82
RTN4-206ENST00000394611 CCDC42Q96M95 316 aa9.91□□□□□ -0.82
RTN4-206ENST00000394611 SENP2Q9HC62 589 aa9.91□□□□□ -0.82
RTN4-206ENST00000394611 NLRC4Q9NPP4 1024 aa9.91□□□□□ -0.82
RTN4-206ENST00000394611 MROH7-TTC4A0A0A0MT08 1334 aa9.91□□□□□ -0.82
RTN4-206ENST00000394611 BTAF1O14981 1849 aa9.91□□□□□ -0.82
RTN4-206ENST00000394611 CTDNEP1O95476 244 aa9.91□□□□□ -0.82
RTN4-206ENST00000394611 MYBL1P10243 752 aa9.91□□□□□ -0.82
RTN4-206ENST00000394611 CDC27P30260 824 aa9.91□□□□□ -0.82
RTN4-206ENST00000394611 CDC25BP30305 580 aa9.91□□□□□ -0.82
RTN4-206ENST00000394611 WTAPQ15007 396 aa9.91□□□□□ -0.82
RTN4-206ENST00000394611 SECISBP2LQ93073 1101 aaKnown RBP9.91□□□□□ -0.82
RTN4-206ENST00000394611 CDK5RAP3Q96JB5 506 aa9.91□□□□□ -0.82
RTN4-206ENST00000394611 SELENOSQ9BQE4 189 aa9.91□□□□□ -0.82
RTN4-206ENST00000394611 EHD2Q9NZN4 543 aa9.91□□□□□ -0.82
RTN4-206ENST00000394611 NHSQ6T4R5 1651 aa9.91□□□□□ -0.82
RTN4-206ENST00000394611 FAM205CA6NFA0 338 aa9.9□□□□□ -0.82
RTN4-206ENST00000394611 ABL1P00519 1130 aa9.9□□□□□ -0.82
RTN4-206ENST00000394611 CLNS1AP54105 237 aaKnown RBP9.9□□□□□ -0.82
RTN4-206ENST00000394611 ADCY1Q08828 1119 aa9.9□□□□□ -0.82
RTN4-206ENST00000394611 KIF5AQ12840 1032 aa9.9□□□□□ -0.82
RTN4-206ENST00000394611 MFSD6Q6ZSS7 791 aa9.9□□□□□ -0.82
RTN4-206ENST00000394611 PCDHB6Q9Y5E3 794 aa9.9□□□□□ -0.82
RTN4-206ENST00000394611 V9GY48 417 aaPredicted RBP9.9□□□□□ -0.82
RTN4-206ENST00000394611 CCDC151A5D8V7 595 aa9.9□□□□□ -0.82
RTN4-206ENST00000394611 SARM1Q6SZW1 724 aa9.9□□□□□ -0.82
RTN4-206ENST00000394611 PIK3AP1Q6ZUJ8 805 aa9.9□□□□□ -0.82
RTN4-206ENST00000394611 MAGEB6Q8N7X4 407 aa9.9□□□□□ -0.82
RTN4-206ENST00000394611 SLC4A9Q96Q91 983 aa9.9□□□□□ -0.82
RTN4-206ENST00000394611 PUS7LQ9H0K6 701 aaKnown RBP9.9□□□□□ -0.82
RTN4-206ENST00000394611 MAST3O60307 1309 aa9.9□□□□□ -0.82
RTN4-206ENST00000394611 TRIM75PA6NK02 468 aa9.9□□□□□ -0.82
RTN4-206ENST00000394611 STAT6P42226 847 aa9.9□□□□□ -0.82
RTN4-206ENST00000394611 KIF23Q02241 960 aaPredicted RBP9.9□□□□□ -0.82
RTN4-206ENST00000394611 TCERG1LQ5VWI1 586 aa9.9□□□□□ -0.82
RTN4-206ENST00000394611 DZIP3Q86Y13 1208 aaKnown RBP9.9□□□□□ -0.82
RTN4-206ENST00000394611 CCDC47Q96A33 483 aaKnown RBP9.9□□□□□ -0.82
RTN4-206ENST00000394611 EXOC4Q96A65 974 aa9.9□□□□□ -0.82
RTN4-206ENST00000394611 JAKMIP2Q96AA8 810 aa9.9□□□□□ -0.82
RTN4-206ENST00000394611 MAN1B1Q9UKM7 699 aa9.9□□□□□ -0.82
RTN4-206ENST00000394611 TRIM49BA6NDI0 452 aa9.89□□□□□ -0.83
RTN4-206ENST00000394611 MBD4O95243 580 aa9.89□□□□□ -0.83
RTN4-206ENST00000394611 KRT18P05783 430 aaKnown RBP9.89□□□□□ -0.83
RTN4-206ENST00000394611 UBA7P41226 1012 aa9.89□□□□□ -0.83
RTN4-206ENST00000394611 CFAP58Q5T655 872 aa9.89□□□□□ -0.83
RTN4-206ENST00000394611 NAA35Q5VZE5 725 aa9.89□□□□□ -0.83
RTN4-206ENST00000394611 BRAPQ7Z569 592 aa9.89□□□□□ -0.83
RTN4-206ENST00000394611 UBLCP1Q8WVY7 318 aaPredicted RBP9.89□□□□□ -0.83
RTN4-206ENST00000394611 CSRNP2Q9H175 543 aa9.89□□□□□ -0.83
RTN4-206ENST00000394611 BABAM1Q9NWV8 329 aa9.89□□□□□ -0.83
RTN4-206ENST00000394611 AOX1Q06278 1338 aa9.89□□□□□ -0.83
RTN4-206ENST00000394611 PHLPP2Q6ZVD8 1323 aa9.89□□□□□ -0.83
RTN4-206ENST00000394611 PALLDQ8WX93 1383 aa9.89□□□□□ -0.83
RTN4-206ENST00000394611 POTEB2H3BUK9 544 aa9.89□□□□□ -0.83
RTN4-206ENST00000394611 MYO1FO00160 1098 aa9.89□□□□□ -0.83
RTN4-206ENST00000394611 CUTAO60888 179 aa9.89□□□□□ -0.83
RTN4-206ENST00000394611 ALDH1L1O75891 902 aa9.89□□□□□ -0.83
RTN4-206ENST00000394611 APBA3O96018 575 aa9.89□□□□□ -0.83
RTN4-206ENST00000394611 RAD9BQ6WBX8 426 aa9.89□□□□□ -0.83
RTN4-206ENST00000394611 TTLL7Q6ZT98 887 aa9.89□□□□□ -0.83
RTN4-206ENST00000394611 ILDR2Q71H61 639 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms