RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 FAM184AQ8NB25 1140 aa8.11□□□□□ -1.11
RTN4-205ENST00000394609 THAP11Q96EK4 314 aa8.11□□□□□ -1.11
RTN4-205ENST00000394609 TMEM87BQ96K49 555 aa8.11□□□□□ -1.11
RTN4-205ENST00000394609 LY9Q9HBG7 655 aa8.11□□□□□ -1.11
RTN4-205ENST00000394609 MKRN1Q9UHC7 482 aaKnown RBP8.11□□□□□ -1.11
RTN4-205ENST00000394609 DAGLAQ9Y4D2 1042 aa8.11□□□□□ -1.11
RTN4-205ENST00000394609 C10orf71Q711Q0 1435 aa8.1□□□□□ -1.11
RTN4-205ENST00000394609 PPIP5K2O43314 1243 aa8.1□□□□□ -1.11
RTN4-205ENST00000394609 PRPF40AO75400 957 aaKnown RBP8.1□□□□□ -1.11
RTN4-205ENST00000394609 PDCP20941 246 aa8.1□□□□□ -1.11
RTN4-205ENST00000394609 POLD1P28340 1107 aa8.1□□□□□ -1.11
RTN4-205ENST00000394609 ADD1P35611 737 aaKnown RBP8.1□□□□□ -1.11
RTN4-205ENST00000394609 RHBDL3P58872 404 aa8.1□□□□□ -1.11
RTN4-205ENST00000394609 FOXC1Q12948 553 aa8.1□□□□□ -1.11
RTN4-205ENST00000394609 FAM47AQ5JRC9 791 aa8.1□□□□□ -1.11
RTN4-205ENST00000394609 APOA5Q6Q788 366 aa8.1□□□□□ -1.11
RTN4-205ENST00000394609 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.1□□□□□ -1.11
RTN4-205ENST00000394609 CDC37L1Q7L3B6 337 aa8.1□□□□□ -1.11
RTN4-205ENST00000394609 MICU3Q86XE3 530 aa8.1□□□□□ -1.11
RTN4-205ENST00000394609 SMAP1Q8IYB5 467 aaPredicted RBP8.1□□□□□ -1.11
RTN4-205ENST00000394609 TEX11Q8IYF3 940 aa8.1□□□□□ -1.11
RTN4-205ENST00000394609 ESR2Q92731 530 aa8.1□□□□□ -1.11
RTN4-205ENST00000394609 DYNLL2Q96FJ2 89 aa8.1□□□□□ -1.11
RTN4-205ENST00000394609 LLPHQ9BRT6 129 aaKnown RBP8.1□□□□□ -1.11
RTN4-205ENST00000394609 UBAC1Q9BSL1 405 aa8.1□□□□□ -1.11
RTN4-205ENST00000394609 GZF1Q9H116 711 aaPredicted RBP8.1□□□□□ -1.11
RTN4-205ENST00000394609 GDPD2Q9HCC8 539 aa8.1□□□□□ -1.11
RTN4-205ENST00000394609 PKD2L1Q9P0L9 805 aa8.1□□□□□ -1.11
RTN4-205ENST00000394609 LRRC37AA6NMS7 1700 aa8.1□□□□□ -1.11
RTN4-205ENST00000394609 CCDC69A6NI79 296 aa8.09□□□□□ -1.11
RTN4-205ENST00000394609 TULP1O00294 542 aaPredicted RBP8.09□□□□□ -1.11
RTN4-205ENST00000394609 DYNC1I1O14576 645 aa8.09□□□□□ -1.11
RTN4-205ENST00000394609 CPLX1O14810 134 aa8.09□□□□□ -1.11
RTN4-205ENST00000394609 F13A1P00488 732 aa8.09□□□□□ -1.11
RTN4-205ENST00000394609 FECHP22830 423 aa8.09□□□□□ -1.11
RTN4-205ENST00000394609 MSNP26038 577 aaKnown RBP8.09□□□□□ -1.11
RTN4-205ENST00000394609 PLCD1P51178 756 aa8.09□□□□□ -1.11
RTN4-205ENST00000394609 LTBP1Q14766 1721 aa8.09□□□□□ -1.11
RTN4-205ENST00000394609 WTAPQ15007 396 aa8.09□□□□□ -1.11
RTN4-205ENST00000394609 SART3Q15020 963 aaKnown RBP8.09□□□□□ -1.11
RTN4-205ENST00000394609 MSS51Q4VC12 460 aa8.09□□□□□ -1.11
RTN4-205ENST00000394609 C12orf60Q5U649 245 aa8.09□□□□□ -1.11
RTN4-205ENST00000394609 CC2D2BQ6DHV5 1058 aa8.09□□□□□ -1.11
RTN4-205ENST00000394609 KIAA0825Q8IV33 1275 aa8.09□□□□□ -1.11
RTN4-205ENST00000394609 SMARCC2Q8TAQ2 1214 aa8.09□□□□□ -1.11
RTN4-205ENST00000394609 MTFR1LQ9H019 292 aa8.09□□□□□ -1.11
RTN4-205ENST00000394609 ZNF277Q9NRM2 450 aaPredicted RBP8.09□□□□□ -1.11
RTN4-205ENST00000394609 ARPP21Q9UBL0 812 aaPredicted RBP8.09□□□□□ -1.11
RTN4-205ENST00000394609 FCF1Q9Y324 198 aaKnown RBP8.09□□□□□ -1.11
RTN4-205ENST00000394609 SLC12A7Q9Y666 1083 aa8.09□□□□□ -1.11
RTN4-205ENST00000394609 SLX4Q8IY92 1834 aa8.09□□□□□ -1.11
RTN4-205ENST00000394609 GAKO14976 1311 aa8.09□□□□□ -1.11
RTN4-205ENST00000394609 ERICH2A1L162 156 aa8.09□□□□□ -1.12
RTN4-205ENST00000394609 ZBTB43O43298 467 aa8.09□□□□□ -1.12
RTN4-205ENST00000394609 DHX16O60231 1041 aaKnown RBP8.09□□□□□ -1.12
RTN4-205ENST00000394609 NMT2O60551 498 aa8.09□□□□□ -1.12
RTN4-205ENST00000394609 IGSF3O75054 1194 aa8.09□□□□□ -1.12
RTN4-205ENST00000394609 POLR3DP05423 398 aaPredicted RBP8.09□□□□□ -1.12
RTN4-205ENST00000394609 SLC3A2P08195 630 aaKnown RBP8.09□□□□□ -1.12
RTN4-205ENST00000394609 FGRP09769 529 aa8.09□□□□□ -1.12
RTN4-205ENST00000394609 FDPSP14324 419 aaKnown RBP8.09□□□□□ -1.12
RTN4-205ENST00000394609 CDC27P30260 824 aa8.09□□□□□ -1.12
RTN4-205ENST00000394609 LIFRP42702 1097 aa8.09□□□□□ -1.12
RTN4-205ENST00000394609 NASPP49321 788 aaPredicted RBP8.09□□□□□ -1.12
RTN4-205ENST00000394609 METAP2P50579 478 aaKnown RBP eCLIP8.09□□□□□ -1.12
RTN4-205ENST00000394609 GUCY1B3Q02153 619 aa8.09□□□□□ -1.12
RTN4-205ENST00000394609 KIAA2012Q0VF49 1180 aa8.09□□□□□ -1.12
RTN4-205ENST00000394609 SBK1Q52WX2 424 aa8.09□□□□□ -1.12
RTN4-205ENST00000394609 CCDC93Q567U6 631 aa8.09□□□□□ -1.12
RTN4-205ENST00000394609 STRIP1Q5VSL9 837 aa8.09□□□□□ -1.12
RTN4-205ENST00000394609 FAM173BQ6P4H8 233 aa8.09□□□□□ -1.12
RTN4-205ENST00000394609 GPIHBP1Q8IV16 184 aa8.09□□□□□ -1.12
RTN4-205ENST00000394609 SLC44A5Q8NCS7 719 aa8.09□□□□□ -1.12
RTN4-205ENST00000394609 PDLIM2Q96JY6 352 aa8.09□□□□□ -1.12
RTN4-205ENST00000394609 ZSCAN10Q96SZ4 725 aaPredicted RBP8.09□□□□□ -1.12
RTN4-205ENST00000394609 NOL7Q9UMY1 257 aaKnown RBP8.09□□□□□ -1.12
RTN4-205ENST00000394609 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.09□□□□□ -1.12
RTN4-205ENST00000394609 SUGT1Q9Y2Z0 365 aa8.09□□□□□ -1.12
RTN4-205ENST00000394609 PCDHAC2Q9Y5I4 1007 aa8.09□□□□□ -1.12
RTN4-205ENST00000394609 TNKSO95271 1327 aa8.08□□□□□ -1.12
RTN4-205ENST00000394609 MYH13Q9UKX3 1938 aa8.08□□□□□ -1.12
RTN4-205ENST00000394609 SRCAPQ6ZRS2 3230 aa8.08□□□□□ -1.12
RTN4-205ENST00000394609 USP17L3A6NCW0 530 aa8.08□□□□□ -1.12
RTN4-205ENST00000394609 USP17L4A6NCW7 530 aa8.08□□□□□ -1.12
RTN4-205ENST00000394609 YDJCA8MPS7 323 aa8.08□□□□□ -1.12
RTN4-205ENST00000394609 H3BQV1 296 aa8.08□□□□□ -1.12
RTN4-205ENST00000394609 ZBTB24O43167 697 aaPredicted RBP8.08□□□□□ -1.12
RTN4-205ENST00000394609 NCLP19338 710 aaKnown RBP8.08□□□□□ -1.12
RTN4-205ENST00000394609 HMGN5P82970 282 aaKnown RBP8.08□□□□□ -1.12
RTN4-205ENST00000394609 PDE4BQ07343 736 aa8.08□□□□□ -1.12
RTN4-205ENST00000394609 PICALMQ13492 652 aa8.08□□□□□ -1.12
RTN4-205ENST00000394609 Q3C1V9 767 aa8.08□□□□□ -1.12
RTN4-205ENST00000394609 TPRNQ4KMQ1 711 aa8.08□□□□□ -1.12
RTN4-205ENST00000394609 DACT2Q5SW24 774 aa8.08□□□□□ -1.12
RTN4-205ENST00000394609 SYNE3Q6ZMZ3 975 aa8.08□□□□□ -1.12
RTN4-205ENST00000394609 USP17L1Q7RTZ2 530 aa8.08□□□□□ -1.12
RTN4-205ENST00000394609 SGMS1Q86VZ5 419 aa8.08□□□□□ -1.12
RTN4-205ENST00000394609 RTKN2Q8IZC4 609 aa8.08□□□□□ -1.12
RTN4-205ENST00000394609 CYP4X1Q8N118 509 aa8.08□□□□□ -1.12
RTN4-205ENST00000394609 CRIPAKQ8N1N5 446 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms