RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 CNTNAP4Q9C0A0 1308 aa17.69■□□□□ 0.42
PTBP1-204ENST00000394601 POLR2DO15514 142 aaKnown RBP17.69■□□□□ 0.42
PTBP1-204ENST00000394601 PRPF3O43395 683 aaKnown RBP17.69■□□□□ 0.42
PTBP1-204ENST00000394601 POSTNQ15063 836 aa17.69■□□□□ 0.42
PTBP1-204ENST00000394601 NUP133Q8WUM0 1156 aa17.69■□□□□ 0.42
PTBP1-204ENST00000394601 CSRNP2Q9H175 543 aa17.69■□□□□ 0.42
PTBP1-204ENST00000394601 CABP5Q9NP86 173 aa17.69■□□□□ 0.42
PTBP1-204ENST00000394601 ZNF652Q9Y2D9 606 aa17.69■□□□□ 0.42
PTBP1-204ENST00000394601 TAF1LQ8IZX4 1826 aa17.69■□□□□ 0.42
PTBP1-204ENST00000394601 NRDCO43847 1150 aa17.69■□□□□ 0.42
PTBP1-204ENST00000394601 TM4SF1P30408 202 aa17.69■□□□□ 0.42
PTBP1-204ENST00000394601 PPP2R5BQ15173 497 aa17.69■□□□□ 0.42
PTBP1-204ENST00000394601 FOXR1Q6PIV2 292 aa17.69■□□□□ 0.42
PTBP1-204ENST00000394601 SLC51AQ86UW1 340 aa17.69■□□□□ 0.42
PTBP1-204ENST00000394601 VPS54Q9P1Q0 977 aa17.69■□□□□ 0.42
PTBP1-204ENST00000394601 PSDA5PKW4 1024 aaPredicted RBP17.68■□□□□ 0.42
PTBP1-204ENST00000394601 SH3RF1Q7Z6J0 888 aa17.68■□□□□ 0.42
PTBP1-204ENST00000394601 TXLNBQ8N3L3 684 aa17.68■□□□□ 0.42
PTBP1-204ENST00000394601 SMARCC1Q92922 1105 aaPredicted RBP17.68■□□□□ 0.42
PTBP1-204ENST00000394601 hCG_1642624A0A1W2PR95 340 aa17.68■□□□□ 0.42
PTBP1-204ENST00000394601 ERICH2A1L162 156 aa17.68■□□□□ 0.42
PTBP1-204ENST00000394601 PRDM1O75626 825 aa17.68■□□□□ 0.42
PTBP1-204ENST00000394601 MECOMQ03112 1051 aa17.68■□□□□ 0.42
PTBP1-204ENST00000394601 CCDC93Q567U6 631 aa17.68■□□□□ 0.42
PTBP1-204ENST00000394601 UBAC1Q9BSL1 405 aa17.68■□□□□ 0.42
PTBP1-204ENST00000394601 VEGFAP15692 232 aaPredicted RBP17.67■□□□□ 0.42
PTBP1-204ENST00000394601 UBASH3AP57075 661 aa17.67■□□□□ 0.42
PTBP1-204ENST00000394601 LEKR1Q6ZMV7 388 aa17.67■□□□□ 0.42
PTBP1-204ENST00000394601 APTXQ7Z2E3 356 aaKnown RBP17.67■□□□□ 0.42
PTBP1-204ENST00000394601 L2HGDHQ9H9P8 463 aa17.67■□□□□ 0.42
PTBP1-204ENST00000394601 RRP15Q9Y3B9 282 aaKnown RBP17.67■□□□□ 0.42
PTBP1-204ENST00000394601 CNTNAP5Q8WYK1 1306 aa17.67■□□□□ 0.42
PTBP1-204ENST00000394601 EP400Q96L91 3159 aa17.67■□□□□ 0.42
PTBP1-204ENST00000394601 MYO1BO43795 1136 aa17.67■□□□□ 0.42
PTBP1-204ENST00000394601 NMT2O60551 498 aa17.67■□□□□ 0.42
PTBP1-204ENST00000394601 SASH3O75995 380 aa17.67■□□□□ 0.42
PTBP1-204ENST00000394601 SAFBQ15424 915 aaKnown RBP eCLIP17.67■□□□□ 0.42
PTBP1-204ENST00000394601 CCDC102AQ96A19 550 aa17.67■□□□□ 0.42
PTBP1-204ENST00000394601 PUF60Q9UHX1 559 aaKnown RBP17.67■□□□□ 0.42
PTBP1-204ENST00000394601 CDK5RAP2Q96SN8 1893 aa17.66■□□□□ 0.42
PTBP1-204ENST00000394601 A0A0G2JS52 829 aa17.66■□□□□ 0.42
PTBP1-204ENST00000394601 GNG11P61952 73 aa17.66■□□□□ 0.42
PTBP1-204ENST00000394601 TXNRD3Q86VQ6 643 aa17.66■□□□□ 0.42
PTBP1-204ENST00000394601 SRBD1Q8N5C6 995 aaKnown RBP17.66■□□□□ 0.42
PTBP1-204ENST00000394601 DCP1AQ9NPI6 582 aaPredicted RBP17.66■□□□□ 0.42
PTBP1-204ENST00000394601 AATFQ9NY61 560 aaKnown RBP eCLIP17.66■□□□□ 0.425e-7■■■■□ 20.4
PTBP1-204ENST00000394601 ORC4O43929 436 aa17.66■□□□□ 0.42
PTBP1-204ENST00000394601 KARSQ15046 597 aaKnown RBP17.66■□□□□ 0.42
PTBP1-204ENST00000394601 ZNF827Q17R98 1081 aa17.66■□□□□ 0.42
PTBP1-204ENST00000394601 TRIM65Q6PJ69 517 aa17.66■□□□□ 0.42
PTBP1-204ENST00000394601 TMTC3Q6ZXV5 915 aa17.66■□□□□ 0.42
PTBP1-204ENST00000394601 TSPYL1Q9H0U9 437 aa17.66■□□□□ 0.42
PTBP1-204ENST00000394601 GNL3LQ9NVN8 582 aaKnown RBP17.66■□□□□ 0.42
PTBP1-204ENST00000394601 MKRN1Q9UHC7 482 aaKnown RBP17.66■□□□□ 0.42
PTBP1-204ENST00000394601 USP17L12C9JPN9 530 aa17.65■□□□□ 0.42
PTBP1-204ENST00000394601 USP17L21D6R901 530 aa17.65■□□□□ 0.42
PTBP1-204ENST00000394601 CWC15Q9P013 229 aaKnown RBP17.65■□□□□ 0.42
PTBP1-204ENST00000394601 BAZ2BQ9UIF8 2168 aaKnown RBP17.65■□□□□ 0.42
PTBP1-204ENST00000394601 SEMA3EO15041 775 aa17.65■□□□□ 0.42
PTBP1-204ENST00000394601 PCP11498 1178 aaKnown RBP17.65■□□□□ 0.42
PTBP1-204ENST00000394601 PPARDQ03181 441 aa17.65■□□□□ 0.42
PTBP1-204ENST00000394601 RCSD1Q6JBY9 416 aa17.65■□□□□ 0.42
PTBP1-204ENST00000394601 GOLGA6L1Q8N7Z2 621 aa17.65■□□□□ 0.42
PTBP1-204ENST00000394601 EPSTI1Q96J88 318 aa17.65■□□□□ 0.42
PTBP1-204ENST00000394601 V9GY48 417 aaPredicted RBP17.65■□□□□ 0.42
PTBP1-204ENST00000394601 LY75O60449 1722 aa17.65■□□□□ 0.42
PTBP1-204ENST00000394601 CASQ1P31415 396 aa17.65■□□□□ 0.42
PTBP1-204ENST00000394601 CAVIN4Q5BKX8 364 aa17.65■□□□□ 0.42
PTBP1-204ENST00000394601 PRDX5P30044 214 aa17.64■□□□□ 0.41
PTBP1-204ENST00000394601 IFIT1BQ5T764 474 aaKnown RBP17.64■□□□□ 0.41
PTBP1-204ENST00000394601 REXO1L1PQ8IX06 675 aa17.64■□□□□ 0.41
PTBP1-204ENST00000394601 ENOX1Q8TC92 643 aaKnown RBP17.64■□□□□ 0.41
PTBP1-204ENST00000394601 HINFPQ9BQA5 517 aa17.64■□□□□ 0.41
PTBP1-204ENST00000394601 SRP68Q9UHB9 627 aaKnown RBP17.64■□□□□ 0.41
PTBP1-204ENST00000394601 NHSQ6T4R5 1651 aa17.64■□□□□ 0.41
PTBP1-204ENST00000394601 SERPINC1P01008 464 aa17.64■□□□□ 0.41
PTBP1-204ENST00000394601 CYP2D6P10635 497 aa17.64■□□□□ 0.41
PTBP1-204ENST00000394601 IL17AQ16552 155 aa17.64■□□□□ 0.41
PTBP1-204ENST00000394601 CFAP100Q494V2 611 aa17.64■□□□□ 0.41
PTBP1-204ENST00000394601 GDAP1L1Q96MZ0 367 aa17.64■□□□□ 0.41
PTBP1-204ENST00000394601 SUGCTQ9HAC7 445 aa17.64■□□□□ 0.41
PTBP1-204ENST00000394601 DDAH1O94760 285 aa17.63■□□□□ 0.41
PTBP1-204ENST00000394601 CD44P16070 742 aaKnown RBP17.63■□□□□ 0.41
PTBP1-204ENST00000394601 CREBRFQ8IUR6 639 aa17.63■□□□□ 0.41
PTBP1-204ENST00000394601 NARFQ9UHQ1 456 aa17.63■□□□□ 0.41
PTBP1-204ENST00000394601 ADAM21Q9UKJ8 722 aa17.63■□□□□ 0.41
PTBP1-204ENST00000394601 MYCNP04198 464 aaPredicted RBP17.63■□□□□ 0.41
PTBP1-204ENST00000394601 RPS8P62241 208 aaKnown RBP17.63■□□□□ 0.41
PTBP1-204ENST00000394601 TRIML1Q8N9V2 468 aa17.63■□□□□ 0.41
PTBP1-204ENST00000394601 H2AFXP16104 143 aaPredicted RBP17.63■□□□□ 0.41
PTBP1-204ENST00000394601 KRT2P35908 639 aa17.63■□□□□ 0.41
PTBP1-204ENST00000394601 DHX8Q14562 1220 aaKnown RBP17.63■□□□□ 0.41
PTBP1-204ENST00000394601 BICDL1Q6ZP65 573 aa17.63■□□□□ 0.41
PTBP1-204ENST00000394601 MLKLQ8NB16 471 aa17.63■□□□□ 0.41
PTBP1-204ENST00000394601 ARFGAP3Q9NP61 516 aa17.63■□□□□ 0.41
PTBP1-204ENST00000394601 RBM28Q9NW13 759 aaKnown RBP17.63■□□□□ 0.41
PTBP1-204ENST00000394601 DDX60LQ5H9U9 1706 aaKnown RBP17.62■□□□□ 0.41
PTBP1-204ENST00000394601 CUL4BQ13620 913 aa17.62■□□□□ 0.41
PTBP1-204ENST00000394601 SBK1Q52WX2 424 aa17.62■□□□□ 0.41
PTBP1-204ENST00000394601 OLFM4Q6UX06 510 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms