RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 GOLPH3LQ9H4A5 285 aa17.27■□□□□ 0.36
CCT4-201ENST00000394440 TAOK2Q9UL54 1235 aa17.27■□□□□ 0.36
CCT4-201ENST00000394440 AKR1B1P15121 316 aa17.26■□□□□ 0.35
CCT4-201ENST00000394440 GNAQP50148 359 aa17.26■□□□□ 0.35
CCT4-201ENST00000394440 PFKFB3Q16875 520 aaPredicted RBP17.26■□□□□ 0.35
CCT4-201ENST00000394440 SLC35G1Q2M3R5 365 aa17.26■□□□□ 0.35
CCT4-201ENST00000394440 DHX36Q9H2U1 1008 aaKnown RBP17.26■□□□□ 0.35
CCT4-201ENST00000394440 CLSTN2Q9H4D0 955 aa17.26■□□□□ 0.35
CCT4-201ENST00000394440 TOP1P11387 765 aaKnown RBP17.26■□□□□ 0.35
CCT4-201ENST00000394440 SCG2P13521 617 aa17.26■□□□□ 0.35
CCT4-201ENST00000394440 RBM5P52756 815 aaKnown RBP eCLIP17.26■□□□□ 0.35
CCT4-201ENST00000394440 CACNB3P54284 484 aa17.26■□□□□ 0.35
CCT4-201ENST00000394440 NR5A1Q13285 461 aa17.26■□□□□ 0.35
CCT4-201ENST00000394440 SF3A1Q15459 793 aaKnown RBP17.26■□□□□ 0.35
CCT4-201ENST00000394440 CCAR1Q8IX12 1150 aaKnown RBP17.26■□□□□ 0.35
CCT4-201ENST00000394440 ENGASEQ8NFI3 743 aa17.26■□□□□ 0.35
CCT4-201ENST00000394440 OXER1Q8TDS5 423 aa17.26■□□□□ 0.35
CCT4-201ENST00000394440 DNAJC18Q9H819 358 aa17.26■□□□□ 0.35
CCT4-201ENST00000394440 TOB1P50616 345 aaPredicted RBP17.25■□□□□ 0.35
CCT4-201ENST00000394440 SNW1Q13573 536 aaKnown RBP17.25■□□□□ 0.35
CCT4-201ENST00000394440 CFAP100Q494V2 611 aa17.25■□□□□ 0.35
CCT4-201ENST00000394440 AXDND1Q5T1B0 1012 aaPredicted RBP17.25■□□□□ 0.35
CCT4-201ENST00000394440 ATRNL1Q5VV63 1379 aa17.25■□□□□ 0.35
CCT4-201ENST00000394440 MTMR4Q9NYA4 1195 aa17.25■□□□□ 0.35
CCT4-201ENST00000394440 PSMD14O00487 310 aa17.25■□□□□ 0.35
CCT4-201ENST00000394440 SH3BP5LQ7L8J4 393 aa17.25■□□□□ 0.35
CCT4-201ENST00000394440 DDTLA6NHG4 134 aaPredicted RBP17.24■□□□□ 0.35
CCT4-201ENST00000394440 CYTH3O43739 400 aa17.24■□□□□ 0.35
CCT4-201ENST00000394440 PPP6R2O75170 966 aa17.24■□□□□ 0.35
CCT4-201ENST00000394440 TNFRSF25Q93038 417 aa17.24■□□□□ 0.35
CCT4-201ENST00000394440 FHDC1Q9C0D6 1143 aaPredicted RBP17.24■□□□□ 0.35
CCT4-201ENST00000394440 VEGFAP15692 232 aaPredicted RBP17.24■□□□□ 0.35
CCT4-201ENST00000394440 RILPL1Q5EBL4 403 aa17.24■□□□□ 0.35
CCT4-201ENST00000394440 RASGRP2Q7LDG7 609 aa17.24■□□□□ 0.35
CCT4-201ENST00000394440 PRMT6Q96LA8 375 aaPredicted RBP17.24■□□□□ 0.35
CCT4-201ENST00000394440 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.24■□□□□ 0.35
CCT4-201ENST00000394440 RAD17O75943 681 aa17.23■□□□□ 0.35
CCT4-201ENST00000394440 FAM160A1Q05DH4 1040 aa17.23■□□□□ 0.35
CCT4-201ENST00000394440 MAP3K11Q16584 847 aa17.23■□□□□ 0.35
CCT4-201ENST00000394440 DALRD3Q5D0E6 543 aaKnown RBP17.23■□□□□ 0.35
CCT4-201ENST00000394440 MRPS27Q92552 414 aaKnown RBP17.23■□□□□ 0.35
CCT4-201ENST00000394440 TDRD3Q9H7E2 651 aaKnown RBP17.23■□□□□ 0.35
CCT4-201ENST00000394440 ARFGEF1Q9Y6D6 1849 aa17.23■□□□□ 0.35
CCT4-201ENST00000394440 ENTPD3O75355 529 aa17.23■□□□□ 0.35
CCT4-201ENST00000394440 KRT2P35908 639 aa17.23■□□□□ 0.35
CCT4-201ENST00000394440 TCP10Q12799 353 aa17.23■□□□□ 0.35
CCT4-201ENST00000394440 METTL16Q86W50 562 aaKnown RBP17.23■□□□□ 0.35
CCT4-201ENST00000394440 FSIP1Q8NA03 581 aa17.23■□□□□ 0.35
CCT4-201ENST00000394440 LZTS2Q9BRK4 669 aa17.23■□□□□ 0.35
CCT4-201ENST00000394440 SPZ1Q9BXG8 430 aa17.23■□□□□ 0.35
CCT4-201ENST00000394440 PI4KBQ9UBF8 816 aa17.23■□□□□ 0.35
CCT4-201ENST00000394440 ZNRF3Q9ULT6 936 aa17.23■□□□□ 0.35
CCT4-201ENST00000394440 CCDC73Q6ZRK6 1079 aa17.22■□□□□ 0.35
CCT4-201ENST00000394440 CCDC17Q96LX7 622 aa17.22■□□□□ 0.35
CCT4-201ENST00000394440 TNMDQ9H2S6 317 aa17.22■□□□□ 0.35
CCT4-201ENST00000394440 SPDYE2BA6NHP3 402 aa17.22■□□□□ 0.35
CCT4-201ENST00000394440 SPDYE6P0CI01 402 aa17.22■□□□□ 0.35
CCT4-201ENST00000394440 SLURP2P0DP57 97 aa17.22■□□□□ 0.35
CCT4-201ENST00000394440 SNHG28P0DPA3 235 aa17.22■□□□□ 0.35
CCT4-201ENST00000394440 CAMK4Q16566 473 aa17.22■□□□□ 0.35
CCT4-201ENST00000394440 FMR1NBQ8N0W7 255 aaPredicted RBP17.22■□□□□ 0.35
CCT4-201ENST00000394440 SH3GLB2Q9NR46 395 aa17.22■□□□□ 0.35
CCT4-201ENST00000394440 SMARCA1P28370 1054 aa17.21■□□□□ 0.35
CCT4-201ENST00000394440 NIM1KQ8IY84 436 aa17.21■□□□□ 0.35
CCT4-201ENST00000394440 SYT17Q9BSW7 474 aa17.21■□□□□ 0.35
CCT4-201ENST00000394440 MORC2Q9Y6X9 1032 aaPredicted RBP17.21■□□□□ 0.35
CCT4-201ENST00000394440 KLRF2D3W0D1 207 aa17.21■□□□□ 0.35
CCT4-201ENST00000394440 PARP1P09874 1014 aaKnown RBP17.21■□□□□ 0.35
CCT4-201ENST00000394440 PDHBP11177 359 aa17.21■□□□□ 0.35
CCT4-201ENST00000394440 EARS2Q5JPH6 523 aaKnown RBP17.21■□□□□ 0.35
CCT4-201ENST00000394440 TATDN1Q6P1N9 297 aa17.21■□□□□ 0.35
CCT4-201ENST00000394440 CLEC10AQ8IUN9 316 aa17.21■□□□□ 0.35
CCT4-201ENST00000394440 JMYQ8N9B5 988 aa17.21■□□□□ 0.35
CCT4-201ENST00000394440 TAOK3Q9H2K8 898 aa17.21■□□□□ 0.35
CCT4-201ENST00000394440 CD2APQ9Y5K6 639 aa17.21■□□□□ 0.35
CCT4-201ENST00000394440 TTLL1O95922 423 aa17.2■□□□□ 0.34
CCT4-201ENST00000394440 GOLGA8HP0CJ92 632 aa17.2■□□□□ 0.34
CCT4-201ENST00000394440 CMA1P23946 247 aa17.2■□□□□ 0.34
CCT4-201ENST00000394440 MARCKSP29966 332 aaPredicted RBP17.2■□□□□ 0.34
CCT4-201ENST00000394440 AGBL3Q8NEM8 1001 aa17.2■□□□□ 0.34
CCT4-201ENST00000394440 BRMS1Q9HCU9 246 aa17.2■□□□□ 0.34
CCT4-201ENST00000394440 FAM205CA6NFA0 338 aa17.2■□□□□ 0.34
CCT4-201ENST00000394440 NFKBIEO00221 500 aa17.2■□□□□ 0.34
CCT4-201ENST00000394440 USP17L2Q6R6M4 530 aa17.2■□□□□ 0.34
CCT4-201ENST00000394440 FOXP4Q8IVH2 680 aaPredicted RBP17.2■□□□□ 0.34
CCT4-201ENST00000394440 FAM177A1Q8N128 213 aaPredicted RBP17.2■□□□□ 0.34
CCT4-201ENST00000394440 CABP5Q9NP86 173 aa17.2■□□□□ 0.34
CCT4-201ENST00000394440 ZBTB12Q9Y330 459 aaPredicted RBP17.2■□□□□ 0.34
CCT4-201ENST00000394440 FAM237AA0A1B0GTK4 181 aa17.19■□□□□ 0.34
CCT4-201ENST00000394440 A0A1B0GVL5 298 aa17.19■□□□□ 0.34
CCT4-201ENST00000394440 YY1P25490 414 aa17.19■□□□□ 0.34
CCT4-201ENST00000394440 TYW1BQ6NUM6 668 aa17.19■□□□□ 0.34
CCT4-201ENST00000394440 MTMR14Q8NCE2 650 aa17.19■□□□□ 0.34
CCT4-201ENST00000394440 HDAC9Q9UKV0 1011 aa17.19■□□□□ 0.34
CCT4-201ENST00000394440 MTMR7Q9Y216 660 aa17.19■□□□□ 0.34
CCT4-201ENST00000394440 PCDHB6Q9Y5E3 794 aa17.19■□□□□ 0.34
CCT4-201ENST00000394440 USP17L5A8MUK1 530 aa17.19■□□□□ 0.34
CCT4-201ENST00000394440 NDUFA8P51970 172 aa17.19■□□□□ 0.34
CCT4-201ENST00000394440 CXCL9Q07325 125 aa17.19■□□□□ 0.34
CCT4-201ENST00000394440 LRRC47Q8N1G4 583 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms