RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 UQCRFS1P1P0C7P4 283 aa21.23■□□□□ 0.99
HOXC6-202ENST00000394331 TBC1D2BQ9UPU7 963 aa21.23■□□□□ 0.99
HOXC6-202ENST00000394331 NWD2Q9ULI1 1742 aa21.23■□□□□ 0.99
HOXC6-202ENST00000394331 ATRNO75882 1429 aa21.23■□□□□ 0.99
HOXC6-202ENST00000394331 SYNE3Q6ZMZ3 975 aa21.23■□□□□ 0.99
HOXC6-202ENST00000394331 MICALCLQ6ZW33 695 aa21.23■□□□□ 0.99
HOXC6-202ENST00000394331 SMTNP53814 917 aa21.22■□□□□ 0.99
HOXC6-202ENST00000394331 MAP2K1Q02750 393 aaPredicted RBP21.22■□□□□ 0.99
HOXC6-202ENST00000394331 MAGEC3Q8TD91 643 aa21.22■□□□□ 0.99
HOXC6-202ENST00000394331 GGA2Q9UJY4 613 aa21.22■□□□□ 0.99
HOXC6-202ENST00000394331 ERVV-1B6SEH8 477 aa21.22■□□□□ 0.99
HOXC6-202ENST00000394331 OTUD6BQ8N6M0 293 aa21.22■□□□□ 0.99
HOXC6-202ENST00000394331 MLKLQ8NB16 471 aa21.22■□□□□ 0.99
HOXC6-202ENST00000394331 RUBCNQ92622 972 aa21.22■□□□□ 0.99
HOXC6-202ENST00000394331 DNAJC5Q9H3Z4 198 aa21.22■□□□□ 0.99
HOXC6-202ENST00000394331 HOOK1Q9UJC3 728 aaKnown RBP21.22■□□□□ 0.99
HOXC6-202ENST00000394331 ANGEL1Q9UNK9 670 aaKnown RBP21.22■□□□□ 0.99
HOXC6-202ENST00000394331 H0YHG0 523 aa21.22■□□□□ 0.99
HOXC6-202ENST00000394331 EPB41P11171 864 aaKnown RBP21.22■□□□□ 0.99
HOXC6-202ENST00000394331 PNOCQ13519 176 aa21.22■□□□□ 0.99
HOXC6-202ENST00000394331 PTPN21Q16825 1174 aa21.22■□□□□ 0.99
HOXC6-202ENST00000394331 OTUD7BQ6GQQ9 843 aa21.22■□□□□ 0.99
HOXC6-202ENST00000394331 N4BP2L2Q92802 583 aaPredicted RBP21.22■□□□□ 0.99
HOXC6-202ENST00000394331 IDH1O75874 414 aaKnown RBP21.21■□□□□ 0.99
HOXC6-202ENST00000394331 CDKL5O76039 1030 aa21.21■□□□□ 0.99
HOXC6-202ENST00000394331 POLR3DP05423 398 aaPredicted RBP21.21■□□□□ 0.99
HOXC6-202ENST00000394331 METTL16Q86W50 562 aaKnown RBP21.21■□□□□ 0.99
HOXC6-202ENST00000394331 SGSM3Q96HU1 749 aa21.21■□□□□ 0.99
HOXC6-202ENST00000394331 TRAPPC11Q7Z392 1133 aa21.21■□□□□ 0.99
HOXC6-202ENST00000394331 BTG4Q9NY30 223 aa21.21■□□□□ 0.99
HOXC6-202ENST00000394331 NFE2L3Q9Y4A8 694 aa21.21■□□□□ 0.99
HOXC6-202ENST00000394331 ARID4AP29374 1257 aaPredicted RBP21.2■□□□□ 0.98
HOXC6-202ENST00000394331 GNGT1P63211 74 aa21.2■□□□□ 0.98
HOXC6-202ENST00000394331 NT5DC1Q5TFE4 455 aa21.2■□□□□ 0.98
HOXC6-202ENST00000394331 RESP18Q5W5W9 173 aa21.2■□□□□ 0.98
HOXC6-202ENST00000394331 CCDC102BQ68D86 513 aa21.2■□□□□ 0.98
HOXC6-202ENST00000394331 PIH1D3Q9NQM4 214 aaKnown RBP21.2■□□□□ 0.98
HOXC6-202ENST00000394331 ODF2LQ9ULJ1 636 aa21.2■□□□□ 0.98
HOXC6-202ENST00000394331 BCL9O00512 1426 aa21.2■□□□□ 0.98
HOXC6-202ENST00000394331 ZMYM6O95789 1325 aa21.2■□□□□ 0.98
HOXC6-202ENST00000394331 GOLGA6BA6NDN3 693 aa21.2■□□□□ 0.98
HOXC6-202ENST00000394331 PATL2C9JE40 543 aaKnown RBP21.2■□□□□ 0.98
HOXC6-202ENST00000394331 PBX1P40424 430 aa21.2■□□□□ 0.98
HOXC6-202ENST00000394331 PDE4BQ07343 736 aa21.2■□□□□ 0.98
HOXC6-202ENST00000394331 DRP2Q13474 957 aa21.2■□□□□ 0.98
HOXC6-202ENST00000394331 ZBTB1Q9Y2K1 713 aa21.2■□□□□ 0.98
HOXC6-202ENST00000394331 MYO1FO00160 1098 aa21.19■□□□□ 0.98
HOXC6-202ENST00000394331 MFAP3LO75121 409 aa21.19■□□□□ 0.98
HOXC6-202ENST00000394331 PPFIBP1Q86W92 1011 aa21.19■□□□□ 0.98
HOXC6-202ENST00000394331 LPIN2Q92539 896 aa21.19■□□□□ 0.98
HOXC6-202ENST00000394331 ZNF532Q9HCE3 1301 aa21.19■□□□□ 0.98
HOXC6-202ENST00000394331 RASSF9O75901 435 aa21.19■□□□□ 0.98
HOXC6-202ENST00000394331 PDE6AP16499 860 aa21.19■□□□□ 0.98
HOXC6-202ENST00000394331 BMP6P22004 513 aa21.19■□□□□ 0.98
HOXC6-202ENST00000394331 IL6STP40189 918 aaPredicted RBP21.19■□□□□ 0.98
HOXC6-202ENST00000394331 PUM3Q15397 648 aaKnown RBP21.19■□□□□ 0.98
HOXC6-202ENST00000394331 CNGA4Q8IV77 575 aa21.19■□□□□ 0.98
HOXC6-202ENST00000394331 TRIML1Q8N9V2 468 aa21.19■□□□□ 0.98
HOXC6-202ENST00000394331 RIN2Q8WYP3 895 aaPredicted RBP21.19■□□□□ 0.98
HOXC6-202ENST00000394331 SELENOOQ9BVL4 669 aa21.19■□□□□ 0.98
HOXC6-202ENST00000394331 VCPKMTQ9H867 229 aa21.19■□□□□ 0.98
HOXC6-202ENST00000394331 MROH5Q6ZUA9 1318 aa21.19■□□□□ 0.98
HOXC6-202ENST00000394331 AKAP17AQ02040 695 aaKnown RBP21.18■□□□□ 0.98
HOXC6-202ENST00000394331 KIF23Q02241 960 aaPredicted RBP21.18■□□□□ 0.98
HOXC6-202ENST00000394331 IQCA1Q86XH1 822 aa21.18■□□□□ 0.98
HOXC6-202ENST00000394331 CCDC50Q8IVM0 306 aa21.18■□□□□ 0.98
HOXC6-202ENST00000394331 TMEM87BQ96K49 555 aa21.18■□□□□ 0.98
HOXC6-202ENST00000394331 SLC4A9Q96Q91 983 aa21.18■□□□□ 0.98
HOXC6-202ENST00000394331 NBPF3Q9H094 633 aa21.18■□□□□ 0.98
HOXC6-202ENST00000394331 KLC4Q9NSK0 619 aa21.18■□□□□ 0.98
HOXC6-202ENST00000394331 PCDHA5Q9Y5H7 936 aa21.18■□□□□ 0.98
HOXC6-202ENST00000394331 ZNF335Q9H4Z2 1342 aaPredicted RBP21.18■□□□□ 0.98
HOXC6-202ENST00000394331 METAP2P50579 478 aaKnown RBP eCLIP21.18■□□□□ 0.98
HOXC6-202ENST00000394331 SHC4Q6S5L8 630 aa21.18■□□□□ 0.98
HOXC6-202ENST00000394331 TMTC1Q8IUR5 882 aa21.18■□□□□ 0.98
HOXC6-202ENST00000394331 ITIH6Q6UXX5 1313 aa21.18■□□□□ 0.98
HOXC6-202ENST00000394331 KLHL33A6NCF5 533 aa21.18■□□□□ 0.98
HOXC6-202ENST00000394331 SH2B2O14492 632 aaPredicted RBP21.18■□□□□ 0.98
HOXC6-202ENST00000394331 PHKA1P46020 1223 aa21.18■□□□□ 0.98
HOXC6-202ENST00000394331 ALX1Q15699 326 aa21.18■□□□□ 0.98
HOXC6-202ENST00000394331 DZIP3Q86Y13 1208 aaKnown RBP21.18■□□□□ 0.98
HOXC6-202ENST00000394331 TBC1D10CQ8IV04 446 aa21.18■□□□□ 0.98
HOXC6-202ENST00000394331 CDC5LQ99459 802 aaKnown RBP21.18■□□□□ 0.98
HOXC6-202ENST00000394331 CD248Q9HCU0 757 aa21.18■□□□□ 0.98
HOXC6-202ENST00000394331 A0A0U1RQJ8 604 aa21.17■□□□□ 0.98
HOXC6-202ENST00000394331 OPA1O60313 960 aa21.17■□□□□ 0.98
HOXC6-202ENST00000394331 CDC27P30260 824 aa21.17■□□□□ 0.98
HOXC6-202ENST00000394331 CKAP4Q07065 602 aaKnown RBP21.17■□□□□ 0.98
HOXC6-202ENST00000394331 CCNI2Q6ZMN8 369 aaPredicted RBP21.17■□□□□ 0.98
HOXC6-202ENST00000394331 RAB11FIP4Q86YS3 637 aa21.17■□□□□ 0.98
HOXC6-202ENST00000394331 ATRIPQ8WXE1 791 aa21.17■□□□□ 0.98
HOXC6-202ENST00000394331 PSMD14O00487 310 aa21.17■□□□□ 0.98
HOXC6-202ENST00000394331 MDM2Q00987 491 aaPredicted RBP21.17■□□□□ 0.98
HOXC6-202ENST00000394331 ANKRD18AQ8IVF6 992 aa21.17■□□□□ 0.98
HOXC6-202ENST00000394331 FOXP4Q8IVH2 680 aaPredicted RBP21.17■□□□□ 0.98
HOXC6-202ENST00000394331 AIDAQ96BJ3 306 aa21.17■□□□□ 0.98
HOXC6-202ENST00000394331 LRP6O75581 1613 aa21.17■□□□□ 0.98
HOXC6-202ENST00000394331 RTN2O75298 545 aa21.16■□□□□ 0.98
HOXC6-202ENST00000394331 ERCC5P28715 1186 aaPredicted RBP21.16■□□□□ 0.98
HOXC6-202ENST00000394331 ACTN3Q08043 901 aaPredicted RBP21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms