RNA–Protein interactions for RNA: ENST00000394241.3

TGFA-202, Transcript of transforming growth factor alpha, humanhuman

TSL 3

Gene TGFA, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-202ENST00000394241 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.19■□□□□ 0.66
TGFA-202ENST00000394241 FGAP02671 866 aa19.18■□□□□ 0.66
TGFA-202ENST00000394241 SLC3A2P08195 630 aaKnown RBP19.18■□□□□ 0.66
TGFA-202ENST00000394241 SYN1P17600 705 aa19.18■□□□□ 0.66
TGFA-202ENST00000394241 SHMT1P34896 483 aa19.18■□□□□ 0.66
TGFA-202ENST00000394241 MAGEA10P43363 369 aaPredicted RBP19.18■□□□□ 0.66
TGFA-202ENST00000394241 TATDN1Q6P1N9 297 aa19.18■□□□□ 0.66
TGFA-202ENST00000394241 FASTKD5Q7L8L6 764 aaKnown RBP19.18■□□□□ 0.66
TGFA-202ENST00000394241 SLC44A5Q8NCS7 719 aa19.18■□□□□ 0.66
TGFA-202ENST00000394241 PICK1Q9NRD5 415 aa19.18■□□□□ 0.66
TGFA-202ENST00000394241 PTPRFP10586 1907 aa19.17■□□□□ 0.66
TGFA-202ENST00000394241 CAP2P40123 477 aa19.17■□□□□ 0.66
TGFA-202ENST00000394241 CERKLQ49MI3 558 aaPredicted RBP19.17■□□□□ 0.66
TGFA-202ENST00000394241 KIAA1211Q6ZU35 1233 aa19.17■□□□□ 0.66
TGFA-202ENST00000394241 ZNF287Q9HBT7 754 aa19.17■□□□□ 0.66
TGFA-202ENST00000394241 A0A0G2JLL6 359 aaPredicted RBP19.16■□□□□ 0.66
TGFA-202ENST00000394241 SMIM22K7EJ46 135 aa19.16■□□□□ 0.66
TGFA-202ENST00000394241 GDF11O95390 407 aa19.16■□□□□ 0.66
TGFA-202ENST00000394241 CDK8P49336 464 aa19.16■□□□□ 0.66
TGFA-202ENST00000394241 PRRT2Q7Z6L0 340 aaPredicted RBP19.16■□□□□ 0.66
TGFA-202ENST00000394241 SMCR8Q8TEV9 937 aaPredicted RBP19.16■□□□□ 0.66
TGFA-202ENST00000394241 COA7Q96BR5 231 aa19.16■□□□□ 0.66
TGFA-202ENST00000394241 UBE2OQ9C0C9 1292 aaKnown RBP19.16■□□□□ 0.66
TGFA-202ENST00000394241 NBPF3Q9H094 633 aa19.16■□□□□ 0.66
TGFA-202ENST00000394241 GINM1Q9NU53 330 aa19.16■□□□□ 0.66
TGFA-202ENST00000394241 CTNNA3Q9UI47 895 aa19.16■□□□□ 0.66
TGFA-202ENST00000394241 SLC45A1Q9Y2W3 748 aa19.16■□□□□ 0.66
TGFA-202ENST00000394241 ASNSP08243 561 aa19.15■□□□□ 0.66
TGFA-202ENST00000394241 PDE4BQ07343 736 aa19.15■□□□□ 0.66
TGFA-202ENST00000394241 RRP1BQ14684 758 aaKnown RBP19.15■□□□□ 0.66
TGFA-202ENST00000394241 GADL1Q6ZQY3 521 aa19.15■□□□□ 0.66
TGFA-202ENST00000394241 STK11IPQ8N1F8 1099 aa19.15■□□□□ 0.66
TGFA-202ENST00000394241 MKNK2Q9HBH9 465 aa19.15■□□□□ 0.66
TGFA-202ENST00000394241 ANO2Q9NQ90 1003 aa19.15■□□□□ 0.66
TGFA-202ENST00000394241 ANAPC4Q9UJX5 808 aa19.15■□□□□ 0.66
TGFA-202ENST00000394241 ZBTB21Q9ULJ3 1066 aa19.15■□□□□ 0.66
TGFA-202ENST00000394241 ZHX2Q9Y6X8 837 aa19.15■□□□□ 0.66
TGFA-202ENST00000394241 PTH1RQ03431 593 aa19.14■□□□□ 0.65
TGFA-202ENST00000394241 ABCB5Q2M3G0 1257 aa19.14■□□□□ 0.65
TGFA-202ENST00000394241 CABP5Q9NP86 173 aa19.14■□□□□ 0.65
TGFA-202ENST00000394241 U3KPZ7 1027 aaPredicted RBP19.14■□□□□ 0.65
TGFA-202ENST00000394241 PHIPQ8WWQ0 1821 aa19.14■□□□□ 0.65
TGFA-202ENST00000394241 ZNF213O14771 459 aa19.13■□□□□ 0.65
TGFA-202ENST00000394241 GH2P01242 217 aa19.13■□□□□ 0.65
TGFA-202ENST00000394241 PTPRAP18433 802 aa19.13■□□□□ 0.65
TGFA-202ENST00000394241 HAND2P61296 217 aa19.13■□□□□ 0.65
TGFA-202ENST00000394241 CTDSPL2Q05D32 466 aa19.13■□□□□ 0.65
TGFA-202ENST00000394241 IMMTQ16891 758 aaKnown RBP19.13■□□□□ 0.65
TGFA-202ENST00000394241 CCDC17Q96LX7 622 aa19.13■□□□□ 0.65
TGFA-202ENST00000394241 TBC1D2Q9BYX2 928 aa19.13■□□□□ 0.65
TGFA-202ENST00000394241 C11orf49Q9H6J7 331 aa19.13■□□□□ 0.65
TGFA-202ENST00000394241 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.13■□□□□ 0.65
TGFA-202ENST00000394241 RPTORQ8N122 1335 aa19.13■□□□□ 0.65
TGFA-202ENST00000394241 MPHOSPH10O00566 681 aaKnown RBP19.12■□□□□ 0.65
TGFA-202ENST00000394241 HMGCRP04035 888 aa19.12■□□□□ 0.65
TGFA-202ENST00000394241 ANKRD13CQ8N6S4 541 aa19.12■□□□□ 0.65
TGFA-202ENST00000394241 LSG1Q9H089 658 aaKnown RBP19.12■□□□□ 0.65
TGFA-202ENST00000394241 AFG3L2Q9Y4W6 797 aa19.12■□□□□ 0.65
TGFA-202ENST00000394241 VCANP13611 3396 aa19.11■□□□□ 0.65
TGFA-202ENST00000394241 USP17L5A8MUK1 530 aa19.11■□□□□ 0.65
TGFA-202ENST00000394241 PRDM1O75626 825 aa19.11■□□□□ 0.65
TGFA-202ENST00000394241 PCP11498 1178 aaKnown RBP19.11■□□□□ 0.65
TGFA-202ENST00000394241 AKR1B1P15121 316 aa19.11■□□□□ 0.65
TGFA-202ENST00000394241 RASA1P20936 1047 aa19.11■□□□□ 0.65
TGFA-202ENST00000394241 SHROOM1Q2M3G4 852 aaPredicted RBP19.11■□□□□ 0.65
TGFA-202ENST00000394241 TMEM179Q6ZVK1 233 aa19.11■□□□□ 0.65
TGFA-202ENST00000394241 MAP4K1Q92918 833 aa19.11■□□□□ 0.65
TGFA-202ENST00000394241 RNF41Q9H4P4 317 aaPredicted RBP19.11■□□□□ 0.65
TGFA-202ENST00000394241 AS3MTQ9HBK9 375 aa19.11■□□□□ 0.65
TGFA-202ENST00000394241 HMX1Q9NP08 348 aaPredicted RBP19.11■□□□□ 0.65
TGFA-202ENST00000394241 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.11■□□□□ 0.65
TGFA-202ENST00000394241 RBM8AQ9Y5S9 174 aaKnown RBP19.11■□□□□ 0.65
TGFA-202ENST00000394241 GREB1LQ9C091 1923 aaPredicted RBP19.11■□□□□ 0.65
TGFA-202ENST00000394241 JAG1P78504 1218 aa19.1■□□□□ 0.65
TGFA-202ENST00000394241 RAB3GAP1Q15042 981 aa19.1■□□□□ 0.65
TGFA-202ENST00000394241 CCDC84Q86UT8 332 aaPredicted RBP19.1■□□□□ 0.65
TGFA-202ENST00000394241 TBC1D10CQ8IV04 446 aa19.1■□□□□ 0.65
TGFA-202ENST00000394241 ZNF444Q8N0Y2 327 aaPredicted RBP19.1■□□□□ 0.65
TGFA-202ENST00000394241 STAG1Q8WVM7 1258 aa19.1■□□□□ 0.65
TGFA-202ENST00000394241 GUCD1Q96NT3 240 aa19.1■□□□□ 0.65
TGFA-202ENST00000394241 ORC4O43929 436 aa19.09■□□□□ 0.65
TGFA-202ENST00000394241 REC8O95072 547 aa19.09■□□□□ 0.65
TGFA-202ENST00000394241 FAM110CQ1W6H9 321 aa19.09■□□□□ 0.65
TGFA-202ENST00000394241 AKNAD1Q5T1N1 836 aa19.09■□□□□ 0.65
TGFA-202ENST00000394241 FAM109BQ6ICB4 259 aaPredicted RBP19.09■□□□□ 0.65
TGFA-202ENST00000394241 TOMM22Q9NS69 142 aa19.09■□□□□ 0.65
TGFA-202ENST00000394241 PLIN4Q96Q06 1357 aa19.08■□□□□ 0.65
TGFA-202ENST00000394241 POTEB2H3BUK9 544 aa19.08■□□□□ 0.64
TGFA-202ENST00000394241 TRIM32Q13049 653 aa19.08■□□□□ 0.64
TGFA-202ENST00000394241 SEPT2Q15019 361 aa19.08■□□□□ 0.64
TGFA-202ENST00000394241 MFSD6Q6ZSS7 791 aa19.08■□□□□ 0.64
TGFA-202ENST00000394241 ZNF280CQ8ND82 737 aa19.08■□□□□ 0.64
TGFA-202ENST00000394241 OGDHLQ9ULD0 1010 aa19.08■□□□□ 0.64
TGFA-202ENST00000394241 AGTPBP1Q9UPW5 1226 aa19.08■□□□□ 0.64
TGFA-202ENST00000394241 PFASO15067 1338 aa19.07■□□□□ 0.64
TGFA-202ENST00000394241 TRIM75PA6NK02 468 aa19.07■□□□□ 0.64
TGFA-202ENST00000394241 CYP21A2P08686 494 aa19.07■□□□□ 0.64
TGFA-202ENST00000394241 FGRP09769 529 aa19.07■□□□□ 0.64
TGFA-202ENST00000394241 TSPY3P0CV98 308 aa19.07■□□□□ 0.64
TGFA-202ENST00000394241 TSPY8P0CW00 308 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms