RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 SLMAPQ14BN4 828 aa9.6□□□□□ -0.87
GABRA1-202ENST00000393943 SEPT7Q16181 437 aaKnown RBP9.6□□□□□ -0.87
GABRA1-202ENST00000393943 CCDC93Q567U6 631 aa9.6□□□□□ -0.87
GABRA1-202ENST00000393943 GALNT17Q6IS24 598 aa9.6□□□□□ -0.87
GABRA1-202ENST00000393943 MSANTD4Q8NCY6 345 aa9.6□□□□□ -0.87
GABRA1-202ENST00000393943 IFT81Q8WYA0 676 aa9.6□□□□□ -0.87
GABRA1-202ENST00000393943 LRRC59Q96AG4 307 aaKnown RBP9.6□□□□□ -0.87
GABRA1-202ENST00000393943 SOWAHDA6NJG2 315 aa9.6□□□□□ -0.87
GABRA1-202ENST00000393943 TSPY2A6NKD2 308 aa9.6□□□□□ -0.87
GABRA1-202ENST00000393943 LIG3P49916 1009 aa9.6□□□□□ -0.87
GABRA1-202ENST00000393943 DRP2Q13474 957 aa9.6□□□□□ -0.87
GABRA1-202ENST00000393943 PUM3Q15397 648 aaKnown RBP9.6□□□□□ -0.87
GABRA1-202ENST00000393943 FBXL16Q8N461 479 aa9.6□□□□□ -0.87
GABRA1-202ENST00000393943 SLIT1O75093 1534 aa9.6□□□□□ -0.87
GABRA1-202ENST00000393943 KIF4AO95239 1232 aa9.6□□□□□ -0.87
GABRA1-202ENST00000393943 ADD1P35611 737 aaKnown RBP9.6□□□□□ -0.87
GABRA1-202ENST00000393943 LACTBP83111 547 aaPredicted RBP9.6□□□□□ -0.87
GABRA1-202ENST00000393943 LONRF3Q496Y0 759 aa9.6□□□□□ -0.87
GABRA1-202ENST00000393943 TOGARAM2Q6ZUX3 1019 aa9.6□□□□□ -0.87
GABRA1-202ENST00000393943 RASGRP2Q7LDG7 609 aa9.6□□□□□ -0.87
GABRA1-202ENST00000393943 DHTKD1Q96HY7 919 aaPredicted RBP9.6□□□□□ -0.87
GABRA1-202ENST00000393943 CLIC6Q96NY7 704 aa9.6□□□□□ -0.87
GABRA1-202ENST00000393943 THAP9Q9H5L6 903 aa9.6□□□□□ -0.87
GABRA1-202ENST00000393943 MKNK2Q9HBH9 465 aa9.6□□□□□ -0.87
GABRA1-202ENST00000393943 C6orf50Q9HD87 102 aa9.6□□□□□ -0.87
GABRA1-202ENST00000393943 DIP2CQ9Y2E4 1556 aa9.6□□□□□ -0.87
GABRA1-202ENST00000393943 OVOS2A0A0G2JMS6 1433 aa9.59□□□□□ -0.87
GABRA1-202ENST00000393943 LAD1O00515 517 aa9.59□□□□□ -0.87
GABRA1-202ENST00000393943 DTNBO60941 627 aa9.59□□□□□ -0.87
GABRA1-202ENST00000393943 ZNF658Q5TYW1 1059 aaPredicted RBP9.59□□□□□ -0.87
GABRA1-202ENST00000393943 STXBP4Q6ZWJ1 553 aa9.59□□□□□ -0.87
GABRA1-202ENST00000393943 ZNF444Q8N0Y2 327 aaPredicted RBP9.59□□□□□ -0.87
GABRA1-202ENST00000393943 WHAMMQ8TF30 809 aa9.59□□□□□ -0.87
GABRA1-202ENST00000393943 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.59□□□□□ -0.87
GABRA1-202ENST00000393943 IL25Q9H293 177 aa9.59□□□□□ -0.87
GABRA1-202ENST00000393943 MAGEB6P1A0A0J9YX57 407 aa9.59□□□□□ -0.87
GABRA1-202ENST00000393943 A0A1B0GTH6 734 aa9.59□□□□□ -0.87
GABRA1-202ENST00000393943 ZRANB2O95218 330 aaKnown RBP eCLIP9.59□□□□□ -0.87
GABRA1-202ENST00000393943 MBD4O95243 580 aa9.59□□□□□ -0.87
GABRA1-202ENST00000393943 RXRAP19793 462 aa9.59□□□□□ -0.87
GABRA1-202ENST00000393943 USP14P54578 494 aa9.59□□□□□ -0.87
GABRA1-202ENST00000393943 CEP128Q6ZU80 1094 aa9.59□□□□□ -0.87
GABRA1-202ENST00000393943 REXO1L1PQ8IX06 675 aa9.59□□□□□ -0.87
GABRA1-202ENST00000393943 CACNA2D3Q8IZS8 1091 aa9.59□□□□□ -0.87
GABRA1-202ENST00000393943 SYCE1Q8N0S2 351 aa9.59□□□□□ -0.87
GABRA1-202ENST00000393943 CCDC85AQ96PX6 553 aaPredicted RBP9.59□□□□□ -0.87
GABRA1-202ENST00000393943 FUT8Q9BYC5 575 aa9.59□□□□□ -0.87
GABRA1-202ENST00000393943 GOPCQ9HD26 462 aa9.59□□□□□ -0.87
GABRA1-202ENST00000393943 GEMIN8Q9NWZ8 242 aaKnown RBP9.59□□□□□ -0.87
GABRA1-202ENST00000393943 CPS1P31327 1500 aa9.59□□□□□ -0.87
GABRA1-202ENST00000393943 CHUKO15111 745 aa9.59□□□□□ -0.87
GABRA1-202ENST00000393943 GNA14O95837 355 aa9.59□□□□□ -0.87
GABRA1-202ENST00000393943 CYP7A1P22680 504 aa9.59□□□□□ -0.87
GABRA1-202ENST00000393943 GBP1P32455 592 aa9.59□□□□□ -0.87
GABRA1-202ENST00000393943 CORO7P57737 925 aa9.59□□□□□ -0.87
GABRA1-202ENST00000393943 ZBED6P86452 979 aa9.59□□□□□ -0.87
GABRA1-202ENST00000393943 CETN1Q12798 172 aa9.59□□□□□ -0.87
GABRA1-202ENST00000393943 ZNF174Q15697 407 aa9.59□□□□□ -0.87
GABRA1-202ENST00000393943 CCDC152Q4G0S7 254 aa9.59□□□□□ -0.87
GABRA1-202ENST00000393943 COG1Q8WTW3 980 aa9.59□□□□□ -0.87
GABRA1-202ENST00000393943 LPIN2Q92539 896 aa9.59□□□□□ -0.87
GABRA1-202ENST00000393943 TMEM51Q9NW97 253 aa9.59□□□□□ -0.87
GABRA1-202ENST00000393943 PREX1Q8TCU6 1659 aa9.59□□□□□ -0.87
GABRA1-202ENST00000393943 MROH5Q6ZUA9 1318 aa9.59□□□□□ -0.87
GABRA1-202ENST00000393943 HMGB1P1B2RPK0 211 aaPredicted RBP9.59□□□□□ -0.87
GABRA1-202ENST00000393943 MCM7P33993 719 aa9.59□□□□□ -0.87
GABRA1-202ENST00000393943 SNCBQ16143 134 aa9.59□□□□□ -0.87
GABRA1-202ENST00000393943 SV2BQ7L1I2 683 aa9.59□□□□□ -0.87
GABRA1-202ENST00000393943 ZNF654Q8IZM8 581 aa9.59□□□□□ -0.87
GABRA1-202ENST00000393943 MAGEB6Q8N7X4 407 aa9.59□□□□□ -0.87
GABRA1-202ENST00000393943 FANCBQ8NB91 859 aa9.59□□□□□ -0.87
GABRA1-202ENST00000393943 SCLT1Q96NL6 688 aa9.59□□□□□ -0.87
GABRA1-202ENST00000393943 CCDC77Q9BR77 488 aa9.59□□□□□ -0.87
GABRA1-202ENST00000393943 VEZTQ9HBM0 779 aa9.59□□□□□ -0.87
GABRA1-202ENST00000393943 PRDM11Q9NQV5 511 aa9.59□□□□□ -0.87
GABRA1-202ENST00000393943 BTBD18B2RXH4 712 aa9.58□□□□□ -0.88
GABRA1-202ENST00000393943 SSBP05455 408 aaKnown RBP eCLIP9.58□□□□□ -0.88
GABRA1-202ENST00000393943 ZAP70P43403 619 aa9.58□□□□□ -0.88
GABRA1-202ENST00000393943 CLNS1AP54105 237 aaKnown RBP9.58□□□□□ -0.88
GABRA1-202ENST00000393943 ST5P78524 1137 aa9.58□□□□□ -0.88
GABRA1-202ENST00000393943 GKAP1Q5VSY0 366 aaPredicted RBP9.58□□□□□ -0.88
GABRA1-202ENST00000393943 WDR93Q6P2C0 686 aa9.58□□□□□ -0.88
GABRA1-202ENST00000393943 RSRC2Q7L4I2 434 aaKnown RBP9.58□□□□□ -0.88
GABRA1-202ENST00000393943 CCDC43Q96MW1 224 aaKnown RBP9.58□□□□□ -0.88
GABRA1-202ENST00000393943 LZTS2Q9BRK4 669 aa9.58□□□□□ -0.88
GABRA1-202ENST00000393943 TRIM7Q9C029 511 aa9.58□□□□□ -0.88
GABRA1-202ENST00000393943 PCDH11XQ9BZA7 1347 aa9.58□□□□□ -0.88
GABRA1-202ENST00000393943 PCDH11YQ9BZA8 1340 aa9.58□□□□□ -0.88
GABRA1-202ENST00000393943 KCNQ3O43525 872 aa9.58□□□□□ -0.88
GABRA1-202ENST00000393943 ACTN4O43707 911 aaKnown RBP9.58□□□□□ -0.88
GABRA1-202ENST00000393943 DDAH1O94760 285 aa9.58□□□□□ -0.88
GABRA1-202ENST00000393943 RPN1P04843 607 aaKnown RBP9.58□□□□□ -0.88
GABRA1-202ENST00000393943 LDHCP07864 332 aa9.58□□□□□ -0.88
GABRA1-202ENST00000393943 USP5P45974 858 aa9.58□□□□□ -0.88
GABRA1-202ENST00000393943 PDE4DQ08499 809 aa9.58□□□□□ -0.88
GABRA1-202ENST00000393943 MB21D2Q8IYB1 491 aaPredicted RBP9.58□□□□□ -0.88
GABRA1-202ENST00000393943 ZNF622Q969S3 477 aaKnown RBP eCLIP9.58□□□□□ -0.88
GABRA1-202ENST00000393943 WDR24Q96S15 920 aa9.58□□□□□ -0.88
GABRA1-202ENST00000393943 ABHD10Q9NUJ1 306 aa9.58□□□□□ -0.88
GABRA1-202ENST00000393943 A0A1W2PQC6 194 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms