RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 NBPF26B4DH59 902 aa16.38■□□□□ 0.21
SFXN3-202ENST00000393459 PDE2AO00408 941 aaPredicted RBP16.38■□□□□ 0.21
SFXN3-202ENST00000393459 MCM7P33993 719 aa16.38■□□□□ 0.21
SFXN3-202ENST00000393459 APBA1Q02410 837 aa16.38■□□□□ 0.21
SFXN3-202ENST00000393459 NBPF14Q5TI25 921 aa16.38■□□□□ 0.21
SFXN3-202ENST00000393459 NBPF10Q6P3W6 841 aaKnown RBP16.38■□□□□ 0.21
SFXN3-202ENST00000393459 LDHAL6AQ6ZMR3 332 aa16.38■□□□□ 0.21
SFXN3-202ENST00000393459 NBPF15Q8N660 670 aa16.38■□□□□ 0.21
SFXN3-202ENST00000393459 SELENOOQ9BVL4 669 aa16.38■□□□□ 0.21
SFXN3-202ENST00000393459 LACRTQ9GZZ8 138 aa16.38■□□□□ 0.21
SFXN3-202ENST00000393459 PIH1D3Q9NQM4 214 aaKnown RBP16.38■□□□□ 0.21
SFXN3-202ENST00000393459 ABHD10Q9NUJ1 306 aa16.38■□□□□ 0.21
SFXN3-202ENST00000393459 SLAIN2Q9P270 581 aa16.38■□□□□ 0.21
SFXN3-202ENST00000393459 CYP2D7A0A087X1C5 515 aa16.38■□□□□ 0.21
SFXN3-202ENST00000393459 PATL2C9JE40 543 aaKnown RBP16.38■□□□□ 0.21
SFXN3-202ENST00000393459 SH2B2O14492 632 aaPredicted RBP16.38■□□□□ 0.21
SFXN3-202ENST00000393459 IDEP14735 1019 aa16.38■□□□□ 0.21
SFXN3-202ENST00000393459 CUL4BQ13620 913 aa16.38■□□□□ 0.21
SFXN3-202ENST00000393459 FAM76AQ8TAV0 307 aa16.38■□□□□ 0.21
SFXN3-202ENST00000393459 IFT81Q8WYA0 676 aa16.38■□□□□ 0.21
SFXN3-202ENST00000393459 APPBP2Q92624 585 aa16.38■□□□□ 0.21
SFXN3-202ENST00000393459 FAM217BQ9NTX9 383 aaPredicted RBP16.38■□□□□ 0.21
SFXN3-202ENST00000393459 ADD3Q9UEY8 706 aaKnown RBP16.38■□□□□ 0.21
SFXN3-202ENST00000393459 SLC4A4Q9Y6R1 1079 aa16.38■□□□□ 0.21
SFXN3-202ENST00000393459 ZNF335Q9H4Z2 1342 aaPredicted RBP16.37■□□□□ 0.21
SFXN3-202ENST00000393459 GOLGA6BA6NDN3 693 aa16.37■□□□□ 0.21
SFXN3-202ENST00000393459 EBAG9O00559 213 aa16.37■□□□□ 0.21
SFXN3-202ENST00000393459 KRT14P02533 472 aa16.37■□□□□ 0.21
SFXN3-202ENST00000393459 MYCNP04198 464 aaPredicted RBP16.37■□□□□ 0.21
SFXN3-202ENST00000393459 EIF5P55010 431 aaKnown RBP16.37■□□□□ 0.21
SFXN3-202ENST00000393459 TRIM22Q8IYM9 498 aa16.37■□□□□ 0.21
SFXN3-202ENST00000393459 JAKMIP2Q96AA8 810 aa16.37■□□□□ 0.21
SFXN3-202ENST00000393459 HPCAL4Q9UM19 191 aa16.37■□□□□ 0.21
SFXN3-202ENST00000393459 TTC26A0AVF1 554 aa16.37■□□□□ 0.21
SFXN3-202ENST00000393459 RCCD1A6NED2 376 aa16.37■□□□□ 0.21
SFXN3-202ENST00000393459 ZSCAN5CA6NGD5 496 aaPredicted RBP16.37■□□□□ 0.21
SFXN3-202ENST00000393459 PPFIA4O75335 1185 aa16.37■□□□□ 0.21
SFXN3-202ENST00000393459 CDKL5O76039 1030 aa16.37■□□□□ 0.21
SFXN3-202ENST00000393459 MBD4O95243 580 aa16.37■□□□□ 0.21
SFXN3-202ENST00000393459 GUCY2CP25092 1073 aa16.37■□□□□ 0.21
SFXN3-202ENST00000393459 ARHGAP25P42331 645 aa16.37■□□□□ 0.21
SFXN3-202ENST00000393459 ACBD3Q9H3P7 528 aa16.37■□□□□ 0.21
SFXN3-202ENST00000393459 DMGDHQ9UI17 866 aaKnown RBP16.37■□□□□ 0.21
SFXN3-202ENST00000393459 DACH1Q9UI36 760 aa16.37■□□□□ 0.21
SFXN3-202ENST00000393459 EPN1Q9Y6I3 576 aaPredicted RBP16.37■□□□□ 0.21
SFXN3-202ENST00000393459 UTYO14607 1347 aa16.37■□□□□ 0.21
SFXN3-202ENST00000393459 NCK2O43639 380 aa16.37■□□□□ 0.21
SFXN3-202ENST00000393459 HPDP32754 393 aaPredicted RBP16.37■□□□□ 0.21
SFXN3-202ENST00000393459 PHKA1P46020 1223 aa16.37■□□□□ 0.21
SFXN3-202ENST00000393459 GUCY2FP51841 1108 aa16.37■□□□□ 0.21
SFXN3-202ENST00000393459 ACTN3Q08043 901 aaPredicted RBP16.37■□□□□ 0.21
SFXN3-202ENST00000393459 MAGEB6Q8N7X4 407 aa16.37■□□□□ 0.21
SFXN3-202ENST00000393459 CD248Q9HCU0 757 aa16.37■□□□□ 0.21
SFXN3-202ENST00000393459 AGPAT5Q9NUQ2 364 aa16.37■□□□□ 0.21
SFXN3-202ENST00000393459 PP2D1A8MPX8 630 aa16.36■□□□□ 0.21
SFXN3-202ENST00000393459 NKRFO15226 690 aaKnown RBP eCLIP16.36■□□□□ 0.21
SFXN3-202ENST00000393459 ACTN4O43707 911 aaKnown RBP16.36■□□□□ 0.21
SFXN3-202ENST00000393459 PLEKP08567 350 aaPredicted RBP16.36■□□□□ 0.21
SFXN3-202ENST00000393459 PIP4K2BP78356 416 aa16.36■□□□□ 0.21
SFXN3-202ENST00000393459 RTN1Q16799 776 aa16.36■□□□□ 0.21
SFXN3-202ENST00000393459 ARL8AQ96BM9 186 aa16.36■□□□□ 0.21
SFXN3-202ENST00000393459 PAGE5Q96GU1 130 aa16.36■□□□□ 0.21
SFXN3-202ENST00000393459 SAR1BQ9Y6B6 198 aa16.36■□□□□ 0.21
SFXN3-202ENST00000393459 SOS2Q07890 1332 aaPredicted RBP16.36■□□□□ 0.21
SFXN3-202ENST00000393459 NDUFAB1O14561 156 aa16.36■□□□□ 0.21
SFXN3-202ENST00000393459 SPATA1Q5VX52 437 aa16.36■□□□□ 0.21
SFXN3-202ENST00000393459 RASGRP4Q8TDF6 673 aa16.36■□□□□ 0.21
SFXN3-202ENST00000393459 SDR42E1Q8WUS8 393 aa16.36■□□□□ 0.21
SFXN3-202ENST00000393459 TACC3Q9Y6A5 838 aa16.36■□□□□ 0.21
SFXN3-202ENST00000393459 V9GY48 417 aaPredicted RBP16.36■□□□□ 0.21
SFXN3-202ENST00000393459 ADAMTS7Q9UKP4 1686 aa16.36■□□□□ 0.21
SFXN3-202ENST00000393459 MYH8P13535 1937 aa16.35■□□□□ 0.21
SFXN3-202ENST00000393459 TSR1Q2NL82 804 aaKnown RBP16.35■□□□□ 0.21
SFXN3-202ENST00000393459 RASGRP2Q7LDG7 609 aa16.35■□□□□ 0.21
SFXN3-202ENST00000393459 IFNL2Q8IZJ0 200 aa16.35■□□□□ 0.21
SFXN3-202ENST00000393459 RUFY1Q96T51 708 aa16.35■□□□□ 0.21
SFXN3-202ENST00000393459 LY9Q9HBG7 655 aa16.35■□□□□ 0.21
SFXN3-202ENST00000393459 REXO2Q9Y3B8 237 aaKnown RBP16.35■□□□□ 0.21
SFXN3-202ENST00000393459 VEGFAP15692 232 aaPredicted RBP16.35■□□□□ 0.21
SFXN3-202ENST00000393459 TRIM21P19474 475 aaKnown RBP16.35■□□□□ 0.21
SFXN3-202ENST00000393459 PTPREP23469 700 aa16.35■□□□□ 0.21
SFXN3-202ENST00000393459 SEC24CP53992 1094 aa16.35■□□□□ 0.21
SFXN3-202ENST00000393459 TCIRG1Q13488 830 aa16.35■□□□□ 0.21
SFXN3-202ENST00000393459 NTRK3Q16288 839 aa16.35■□□□□ 0.21
SFXN3-202ENST00000393459 CCDC96Q2M329 555 aa16.35■□□□□ 0.21
SFXN3-202ENST00000393459 CEP57Q86XR8 500 aa16.35■□□□□ 0.21
SFXN3-202ENST00000393459 CNGA4Q8IV77 575 aa16.35■□□□□ 0.21
SFXN3-202ENST00000393459 ANKRD18AQ8IVF6 992 aa16.35■□□□□ 0.21
SFXN3-202ENST00000393459 MSANTD4Q8NCY6 345 aa16.35■□□□□ 0.21
SFXN3-202ENST00000393459 HPS3Q969F9 1004 aa16.35■□□□□ 0.21
SFXN3-202ENST00000393459 PSD3Q9NYI0 1048 aa16.35■□□□□ 0.21
SFXN3-202ENST00000393459 ABCF2Q9UG63 623 aa16.35■□□□□ 0.21
SFXN3-202ENST00000393459 RAB21Q9UL25 225 aa16.35■□□□□ 0.21
SFXN3-202ENST00000393459 HEG1Q9ULI3 1381 aa16.35■□□□□ 0.21
SFXN3-202ENST00000393459 NDUFA10O95299 355 aa16.34■□□□□ 0.21
SFXN3-202ENST00000393459 PHKG2P15735 406 aa16.34■□□□□ 0.21
SFXN3-202ENST00000393459 IRAK1P51617 712 aa16.34■□□□□ 0.21
SFXN3-202ENST00000393459 APTXQ7Z2E3 356 aaKnown RBP16.34■□□□□ 0.21
SFXN3-202ENST00000393459 NELFBQ8WX92 580 aa16.34■□□□□ 0.21
SFXN3-202ENST00000393459 LRRC1Q9BTT6 524 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms