RNA–Protein interactions for RNA: ENST00000392000.4

LRRFIP1-204, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRRFIP1, Length 3,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-204ENST00000392000 DPYDQ12882 1025 aa16.42■□□□□ 0.22
LRRFIP1-204ENST00000392000 PUM3Q15397 648 aaKnown RBP16.42■□□□□ 0.22
LRRFIP1-204ENST00000392000 BEND6Q5SZJ8 279 aaPredicted RBP16.42■□□□□ 0.22
LRRFIP1-204ENST00000392000 BRINP3Q76B58 766 aa16.42■□□□□ 0.22
LRRFIP1-204ENST00000392000 CRACR2AQ9BSW2 395 aa16.42■□□□□ 0.22
LRRFIP1-204ENST00000392000 IPO7O95373 1038 aaKnown RBP16.42■□□□□ 0.22
LRRFIP1-204ENST00000392000 PPARAQ07869 468 aa16.42■□□□□ 0.22
LRRFIP1-204ENST00000392000 SF3A3Q12874 501 aaKnown RBP eCLIP16.42■□□□□ 0.22
LRRFIP1-204ENST00000392000 PTGDRQ13258 359 aa16.42■□□□□ 0.22
LRRFIP1-204ENST00000392000 SUSD4Q5VX71 490 aa16.42■□□□□ 0.22
LRRFIP1-204ENST00000392000 CCDC148Q8NFR7 591 aa16.42■□□□□ 0.22
LRRFIP1-204ENST00000392000 CENPHQ9H3R5 247 aa16.42■□□□□ 0.22
LRRFIP1-204ENST00000392000 TNKSO95271 1327 aa16.42■□□□□ 0.22
LRRFIP1-204ENST00000392000 MFAP3LO75121 409 aa16.41■□□□□ 0.22
LRRFIP1-204ENST00000392000 FMNL1O95466 1100 aaPredicted RBP16.41■□□□□ 0.22
LRRFIP1-204ENST00000392000 MORC3Q14149 939 aa16.41■□□□□ 0.22
LRRFIP1-204ENST00000392000 KRT31Q15323 416 aa16.41■□□□□ 0.22
LRRFIP1-204ENST00000392000 CRACR2BQ8N4Y2 399 aaPredicted RBP16.41■□□□□ 0.22
LRRFIP1-204ENST00000392000 WASF1Q92558 559 aa16.41■□□□□ 0.22
LRRFIP1-204ENST00000392000 EHD4Q9H223 541 aa16.41■□□□□ 0.22
LRRFIP1-204ENST00000392000 SMARCAL1Q9NZC9 954 aa16.41■□□□□ 0.22
LRRFIP1-204ENST00000392000 NLRP5P59047 1200 aa16.41■□□□□ 0.22
LRRFIP1-204ENST00000392000 ERVK-24P63145 666 aa16.41■□□□□ 0.22
LRRFIP1-204ENST00000392000 CUL4BQ13620 913 aa16.41■□□□□ 0.22
LRRFIP1-204ENST00000392000 PTPROQ16827 1216 aa16.41■□□□□ 0.22
LRRFIP1-204ENST00000392000 GOLGA5Q8TBA6 731 aa16.41■□□□□ 0.22
LRRFIP1-204ENST00000392000 LPIN2Q92539 896 aa16.41■□□□□ 0.22
LRRFIP1-204ENST00000392000 PAGE5Q96GU1 130 aa16.41■□□□□ 0.22
LRRFIP1-204ENST00000392000 MYO6Q9UM54 1294 aa16.41■□□□□ 0.22
LRRFIP1-204ENST00000392000 ADAMTS3O15072 1205 aa16.41■□□□□ 0.22
LRRFIP1-204ENST00000392000 PDE8AO60658 829 aa16.41■□□□□ 0.22
LRRFIP1-204ENST00000392000 RNF40O75150 1001 aa16.41■□□□□ 0.22
LRRFIP1-204ENST00000392000 BRD3Q15059 726 aa16.41■□□□□ 0.22
LRRFIP1-204ENST00000392000 SPATA1Q5VX52 437 aa16.41■□□□□ 0.22
LRRFIP1-204ENST00000392000 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.41■□□□□ 0.22
LRRFIP1-204ENST00000392000 TCRBV5S4A2TA0A5A2 114 aa16.4■□□□□ 0.22
LRRFIP1-204ENST00000392000 XBP1P17861 261 aa16.4■□□□□ 0.22
LRRFIP1-204ENST00000392000 TRIM21P19474 475 aaKnown RBP16.4■□□□□ 0.22
LRRFIP1-204ENST00000392000 SMCR8Q8TEV9 937 aaPredicted RBP16.4■□□□□ 0.22
LRRFIP1-204ENST00000392000 IFNAR1P17181 557 aa16.4■□□□□ 0.22
LRRFIP1-204ENST00000392000 KCNJ6P48051 423 aa16.4■□□□□ 0.22
LRRFIP1-204ENST00000392000 TBX2Q13207 712 aaPredicted RBP16.4■□□□□ 0.22
LRRFIP1-204ENST00000392000 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.4■□□□□ 0.22
LRRFIP1-204ENST00000392000 SRLQ86TD4 932 aa16.4■□□□□ 0.22
LRRFIP1-204ENST00000392000 DUSP10Q9Y6W6 482 aa16.4■□□□□ 0.22
LRRFIP1-204ENST00000392000 PP2D1A8MPX8 630 aa16.4■□□□□ 0.22
LRRFIP1-204ENST00000392000 ZNF18P17022 549 aa16.4■□□□□ 0.22
LRRFIP1-204ENST00000392000 LIG3P49916 1009 aa16.4■□□□□ 0.22
LRRFIP1-204ENST00000392000 SLC7A5Q01650 507 aa16.4■□□□□ 0.22
LRRFIP1-204ENST00000392000 FCHSD1Q86WN1 690 aa16.4■□□□□ 0.22
LRRFIP1-204ENST00000392000 NELFBQ8WX92 580 aa16.4■□□□□ 0.22
LRRFIP1-204ENST00000392000 EXOC4Q96A65 974 aa16.4■□□□□ 0.22
LRRFIP1-204ENST00000392000 SHISA4Q96DD7 197 aa16.4■□□□□ 0.22
LRRFIP1-204ENST00000392000 TRIM47Q96LD4 638 aa16.4■□□□□ 0.22
LRRFIP1-204ENST00000392000 CEP131Q9UPN4 1083 aa16.4■□□□□ 0.22
LRRFIP1-204ENST00000392000 SLIT3O75094 1523 aa16.39■□□□□ 0.21
LRRFIP1-204ENST00000392000 ACTN4O43707 911 aaKnown RBP16.39■□□□□ 0.21
LRRFIP1-204ENST00000392000 MDM2Q00987 491 aaPredicted RBP16.39■□□□□ 0.21
LRRFIP1-204ENST00000392000 CNGA4Q8IV77 575 aa16.39■□□□□ 0.21
LRRFIP1-204ENST00000392000 KCND1Q9NSA2 647 aa16.39■□□□□ 0.21
LRRFIP1-204ENST00000392000 SOS2Q07890 1332 aaPredicted RBP16.39■□□□□ 0.21
LRRFIP1-204ENST00000392000 RIC1Q4ADV7 1423 aa16.39■□□□□ 0.21
LRRFIP1-204ENST00000392000 DEXIO95424 95 aa16.39■□□□□ 0.21
LRRFIP1-204ENST00000392000 ATP2B2Q01814 1243 aa16.39■□□□□ 0.21
LRRFIP1-204ENST00000392000 VGLL2Q8N8G2 317 aa16.39■□□□□ 0.21
LRRFIP1-204ENST00000392000 MMS19Q96T76 1030 aa16.39■□□□□ 0.21
LRRFIP1-204ENST00000392000 SAMM50Q9Y512 469 aa16.39■□□□□ 0.21
LRRFIP1-204ENST00000392000 UQCRFS1P1P0C7P4 283 aa16.38■□□□□ 0.21
LRRFIP1-204ENST00000392000 KRT23Q9C075 422 aa16.38■□□□□ 0.21
LRRFIP1-204ENST00000392000 NIP7Q9Y221 180 aaKnown RBP eCLIP16.38■□□□□ 0.21
LRRFIP1-204ENST00000392000 A0A1B0GTH6 734 aa16.38■□□□□ 0.21
LRRFIP1-204ENST00000392000 ATP1A1P05023 1023 aaKnown RBP16.38■□□□□ 0.21
LRRFIP1-204ENST00000392000 GTF2A1P52655 376 aaPredicted RBP16.38■□□□□ 0.21
LRRFIP1-204ENST00000392000 C2orf54Q08AI8 447 aa16.38■□□□□ 0.21
LRRFIP1-204ENST00000392000 IFIT1BQ5T764 474 aaKnown RBP16.38■□□□□ 0.21
LRRFIP1-204ENST00000392000 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.38■□□□□ 0.21
LRRFIP1-204ENST00000392000 ADD3Q9UEY8 706 aaKnown RBP16.38■□□□□ 0.21
LRRFIP1-204ENST00000392000 KCNJ18B7U540 433 aa16.38■□□□□ 0.21
LRRFIP1-204ENST00000392000 TULP2O00295 520 aa16.38■□□□□ 0.21
LRRFIP1-204ENST00000392000 KCNJ12Q14500 433 aa16.38■□□□□ 0.21
LRRFIP1-204ENST00000392000 KCTD16Q68DU8 428 aa16.38■□□□□ 0.21
LRRFIP1-204ENST00000392000 GPKOWQ92917 476 aaPredicted RBP eCLIP16.38■□□□□ 0.21
LRRFIP1-204ENST00000392000 TFCP2L1Q9NZI6 479 aa16.38■□□□□ 0.21
LRRFIP1-204ENST00000392000 EPN1Q9Y6I3 576 aaPredicted RBP16.38■□□□□ 0.21
LRRFIP1-204ENST00000392000 ZEB2O60315 1214 aa16.37■□□□□ 0.21
LRRFIP1-204ENST00000392000 CCT5P48643 541 aa16.37■□□□□ 0.21
LRRFIP1-204ENST00000392000 KLK7P49862 253 aa16.37■□□□□ 0.21
LRRFIP1-204ENST00000392000 EHD2Q9NZN4 543 aa16.37■□□□□ 0.21
LRRFIP1-204ENST00000392000 L1RE1Q9UN81 338 aa16.37■□□□□ 0.21
LRRFIP1-204ENST00000392000 LUC7L2Q9Y383 392 aaKnown RBP16.37■□□□□ 0.21
LRRFIP1-204ENST00000392000 SRPRBQ9Y5M8 271 aaKnown RBP16.37■□□□□ 0.21
LRRFIP1-204ENST00000392000 EIF3CLB5ME19 914 aaKnown RBP16.37■□□□□ 0.21
LRRFIP1-204ENST00000392000 KRT2P35908 639 aa16.37■□□□□ 0.21
LRRFIP1-204ENST00000392000 COPB1P53618 953 aaKnown RBP16.37■□□□□ 0.21
LRRFIP1-204ENST00000392000 KRT26Q7Z3Y9 468 aa16.37■□□□□ 0.21
LRRFIP1-204ENST00000392000 SGMS1Q86VZ5 419 aa16.37■□□□□ 0.21
LRRFIP1-204ENST00000392000 EIF3CQ99613 913 aaKnown RBP16.37■□□□□ 0.21
LRRFIP1-204ENST00000392000 CPVLQ9H3G5 476 aa16.37■□□□□ 0.21
LRRFIP1-204ENST00000392000 ACBD3Q9H3P7 528 aa16.37■□□□□ 0.21
LRRFIP1-204ENST00000392000 BRMS1Q9HCU9 246 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms