RNA–Protein interactions for RNA: ENST00000390484.1

TRAJ54-201, Transcript of T cell receptor alpha joining 54, humanhuman

APPRIS P1 BASIC

Gene TRAJ54, Length 60 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ54-201ENST00000390484 CD68P34810 354 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 BMP8BP34820 402 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 THBS4P35443 961 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 CLCN1P35523 988 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 TIMP3P35625 211 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 FUSP35637 526 aaKnown RBP eCLIP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 SOX18P35713 384 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ZNF76P36508 570 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ZEB1P37275 1124 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 PLA2G5P39877 138 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 GDNFP39905 211 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ADH7P40394 386 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 RFC5P40937 340 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 BCL6P41182 706 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 TXKP42681 527 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 CTSKP43235 329 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 NR4A2P43354 598 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 MAGEA10P43363 369 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 PHKA2P46019 1235 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 CRKP46108 304 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 MAP2K3P46734 347 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 GRIA4P48058 902 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 LIMS1P48059 325 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 GLIPR1P48060 266 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 SLC6A9P48067 706 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 PREPP48147 710 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 SLC4A3P48751 1232 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 PXNP49023 591 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 PTH2RP49190 550 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 CLK2P49760 499 aaKnown RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 RARRES1P49788 294 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 GZMKP49863 264 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 IDH3AP50213 366 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 CSRP3P50461 194 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 PDLIM4P50479 330 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 SCNN1GP51170 649 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 GALK1P51570 392 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 MECP2P51608 486 aaKnown RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ARSDP51689 593 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ADCY7P51828 1080 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ZNF134P52741 427 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 EFNA3P52797 238 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 SEC24CP53992 1094 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 HIRAP54198 1017 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ATXN1P54253 815 aaKnown RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 EPHB3P54753 998 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 NRLP54845 237 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 GDF10P55107 478 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 NCKAP1LP55160 1127 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 FOXG1P55316 489 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 MARSP56192 900 aaKnown RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ITGA1P56199 1179 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 CTSWP56202 376 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 LGALS4P56470 323 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 SOX8P57073 446 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 PCBP4P57723 403 aaKnown RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ANTXR2P58335 489 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 LINC00310P59036 64 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 NLRP12P59046 1061 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 B3GALT5-AS1P59052 145 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ZNF445P59923 1031 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 KRTAP12-2P59991 146 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 NANOS2P60321 138 aaKnown RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 NANOS3P60323 173 aaKnown RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 SEC61BP60468 96 aaKnown RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ERVFRD-1P60508 538 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ZC3H6P61129 1189 aaKnown RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 USP46P62068 366 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 RACK1P63244 317 aaKnown RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 DLG4P78352 724 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 CTAG1AP78358 180 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 KRT85P78386 507 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 GPLD1P80108 840 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 MAP3K9P80192 1104 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ABATP80404 500 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 SIM1P81133 766 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 FAM189BP81408 668 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 HTRA4P83105 476 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 LACTBP83111 547 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ZXDAP98168 799 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ARHGAP4P98171 946 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 FOXO4P98177 505 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ATP11AP98196 1134 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ATP8B2P98198 1209 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 HOXA4Q00056 320 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 PURAQ00577 322 aaKnown RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 HNRNPUQ00839 825 aaKnown RBP eCLIP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 RELBQ01201 579 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 BNC1Q01954 994 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 PLCB3Q01970 1234 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 SP2Q02086 613 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 CYP27A1Q02318 531 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 DSC2Q02487 901 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 TAP1Q03518 808 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 CFHR1Q03591 330 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 OCA2Q04671 838 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 PRKCQQ04759 706 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 PTPN12Q05209 780 aaKnown RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 CLCQ05315 142 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 PTK2Q05397 1052 aa-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms