RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 TNPO3Q9Y5L0 923 aaKnown RBP7.93□□□□□ -1.14
TRAV35-201ENST00000390462 TCERG1O14776 1098 aaKnown RBP7.92□□□□□ -1.14
TRAV35-201ENST00000390462 NBNO60934 754 aa7.92□□□□□ -1.14
TRAV35-201ENST00000390462 SNUPNO95149 360 aaKnown RBP7.92□□□□□ -1.14
TRAV35-201ENST00000390462 PF4V1P10720 104 aa7.92□□□□□ -1.14
TRAV35-201ENST00000390462 PYGMP11217 842 aa7.92□□□□□ -1.14
TRAV35-201ENST00000390462 BPIP17213 487 aa7.92□□□□□ -1.14
TRAV35-201ENST00000390462 CCND1P24385 295 aa7.92□□□□□ -1.14
TRAV35-201ENST00000390462 WDR4P57081 412 aaKnown RBP7.92□□□□□ -1.14
TRAV35-201ENST00000390462 GRB10Q13322 594 aa7.92□□□□□ -1.14
TRAV35-201ENST00000390462 ABCB5Q2M3G0 1257 aa7.92□□□□□ -1.14
TRAV35-201ENST00000390462 ARHGAP29Q52LW3 1261 aa7.92□□□□□ -1.14
TRAV35-201ENST00000390462 ARSJQ5FYB0 599 aaPredicted RBP7.92□□□□□ -1.14
TRAV35-201ENST00000390462 C1orf228Q6PIY5 440 aa7.92□□□□□ -1.14
TRAV35-201ENST00000390462 CCDC89Q8N998 374 aa7.92□□□□□ -1.14
TRAV35-201ENST00000390462 TRERF1Q96PN7 1200 aa7.92□□□□□ -1.14
TRAV35-201ENST00000390462 ZFAND3Q9H8U3 227 aa7.92□□□□□ -1.14
TRAV35-201ENST00000390462 LRRC4BQ9NT99 713 aa7.92□□□□□ -1.14
TRAV35-201ENST00000390462 ZBTB21Q9ULJ3 1066 aa7.92□□□□□ -1.14
TRAV35-201ENST00000390462 FRMPD2Q68DX3 1309 aaPredicted RBP7.92□□□□□ -1.14
TRAV35-201ENST00000390462 A0A0G2JS52 829 aa7.91□□□□□ -1.14
TRAV35-201ENST00000390462 DYTNA2CJ06 578 aa7.91□□□□□ -1.14
TRAV35-201ENST00000390462 J3QL48 77 aa7.91□□□□□ -1.14
TRAV35-201ENST00000390462 ERC2O15083 957 aa7.91□□□□□ -1.14
TRAV35-201ENST00000390462 OPA1O60313 960 aa7.91□□□□□ -1.14
TRAV35-201ENST00000390462 RNASEH2AO75792 299 aaKnown RBP7.91□□□□□ -1.14
TRAV35-201ENST00000390462 ASLP04424 464 aa7.91□□□□□ -1.14
TRAV35-201ENST00000390462 TIMP2P16035 220 aa7.91□□□□□ -1.14
TRAV35-201ENST00000390462 CYP2C19P33261 490 aa7.91□□□□□ -1.14
TRAV35-201ENST00000390462 ID4P47928 161 aa7.91□□□□□ -1.14
TRAV35-201ENST00000390462 GEMIN4P57678 1058 aaKnown RBP7.91□□□□□ -1.14
TRAV35-201ENST00000390462 GJA9P57773 515 aa7.91□□□□□ -1.14
TRAV35-201ENST00000390462 STK3Q13188 491 aa7.91□□□□□ -1.14
TRAV35-201ENST00000390462 MMRN1Q13201 1228 aa7.91□□□□□ -1.14
TRAV35-201ENST00000390462 GTF2H3Q13889 308 aa7.91□□□□□ -1.14
TRAV35-201ENST00000390462 ZNF460Q14592 562 aa7.91□□□□□ -1.14
TRAV35-201ENST00000390462 EPM2AIP1Q7L775 607 aaPredicted RBP7.91□□□□□ -1.14
TRAV35-201ENST00000390462 SLC7A14Q8TBB6 771 aa7.91□□□□□ -1.14
TRAV35-201ENST00000390462 GRIN3AQ8TCU5 1115 aa7.91□□□□□ -1.14
TRAV35-201ENST00000390462 NXPE3Q969Y0 559 aa7.91□□□□□ -1.14
TRAV35-201ENST00000390462 GSX2Q9BZM3 304 aa7.91□□□□□ -1.14
TRAV35-201ENST00000390462 APOBEC2Q9Y235 224 aaKnown RBP7.91□□□□□ -1.14
TRAV35-201ENST00000390462 MORC2Q9Y6X9 1032 aaPredicted RBP7.91□□□□□ -1.14
TRAV35-201ENST00000390462 ZNF608Q9ULD9 1512 aaPredicted RBP7.91□□□□□ -1.14
TRAV35-201ENST00000390462 PRDM2Q13029 1718 aa7.9□□□□□ -1.14
TRAV35-201ENST00000390462 EIF4G3O43432 1585 aaKnown RBP7.9□□□□□ -1.14
TRAV35-201ENST00000390462 PRR36Q9H6K5 1346 aa7.9□□□□□ -1.14
TRAV35-201ENST00000390462 TTC24A2A3L6 582 aaPredicted RBP7.9□□□□□ -1.14
TRAV35-201ENST00000390462 SPATA31C2B4DYI2 1134 aa7.9□□□□□ -1.14
TRAV35-201ENST00000390462 GDF9O60383 454 aa7.9□□□□□ -1.14
TRAV35-201ENST00000390462 PRKD3O94806 890 aa7.9□□□□□ -1.14
TRAV35-201ENST00000390462 HTR3BO95264 441 aa7.9□□□□□ -1.14
TRAV35-201ENST00000390462 NME1P15531 152 aaKnown RBP7.9□□□□□ -1.14
TRAV35-201ENST00000390462 TARSP26639 723 aaKnown RBP7.9□□□□□ -1.14
TRAV35-201ENST00000390462 ZNF143P52747 638 aaPredicted RBP7.9□□□□□ -1.14
TRAV35-201ENST00000390462 PTPN11Q06124 597 aaPredicted RBP7.9□□□□□ -1.14
TRAV35-201ENST00000390462 HYAL2Q12891 473 aa7.9□□□□□ -1.14
TRAV35-201ENST00000390462 MLECQ14165 292 aa7.9□□□□□ -1.14
TRAV35-201ENST00000390462 GNPTABQ3T906 1256 aa7.9□□□□□ -1.14
TRAV35-201ENST00000390462 GPR158Q5T848 1215 aa7.9□□□□□ -1.14
TRAV35-201ENST00000390462 COL13A1Q5TAT6 717 aaPredicted RBP7.9□□□□□ -1.14
TRAV35-201ENST00000390462 MMS22LQ6ZRQ5 1243 aa7.9□□□□□ -1.14
TRAV35-201ENST00000390462 KRT25Q7Z3Z0 450 aa7.9□□□□□ -1.14
TRAV35-201ENST00000390462 BRAPQ7Z569 592 aa7.9□□□□□ -1.14
TRAV35-201ENST00000390462 FCHSD1Q86WN1 690 aa7.9□□□□□ -1.14
TRAV35-201ENST00000390462 CEP120Q8N960 986 aa7.9□□□□□ -1.14
TRAV35-201ENST00000390462 TMEM102Q8N9M5 508 aaPredicted RBP7.9□□□□□ -1.14
TRAV35-201ENST00000390462 PPHLN1Q8NEY8 458 aaKnown RBP7.9□□□□□ -1.14
TRAV35-201ENST00000390462 OR2W6PQ8NHA6 318 aa7.9□□□□□ -1.14
TRAV35-201ENST00000390462 ENOX1Q8TC92 643 aaKnown RBP7.9□□□□□ -1.14
TRAV35-201ENST00000390462 ATG4CQ96DT6 458 aa7.9□□□□□ -1.14
TRAV35-201ENST00000390462 FUBP3Q96I24 572 aaKnown RBP eCLIP7.9□□□□□ -1.14
TRAV35-201ENST00000390462 MPP4Q96JB8 637 aa7.9□□□□□ -1.14
TRAV35-201ENST00000390462 TNIP3Q96KP6 325 aa7.9□□□□□ -1.14
TRAV35-201ENST00000390462 GPR101Q96P66 508 aaPredicted RBP7.9□□□□□ -1.14
TRAV35-201ENST00000390462 HHIPQ96QV1 700 aa7.9□□□□□ -1.14
TRAV35-201ENST00000390462 SLC13A1Q9BZW2 595 aa7.9□□□□□ -1.14
TRAV35-201ENST00000390462 CBX8Q9HC52 389 aa7.9□□□□□ -1.14
TRAV35-201ENST00000390462 NLRC4Q9NPP4 1024 aa7.9□□□□□ -1.14
TRAV35-201ENST00000390462 DDX21Q9NR30 783 aaKnown RBP eCLIP7.9□□□□□ -1.14
TRAV35-201ENST00000390462 KLHL11Q9NVR0 708 aa7.9□□□□□ -1.14
TRAV35-201ENST00000390462 NDOR1Q9UHB4 597 aa7.9□□□□□ -1.14
TRAV35-201ENST00000390462 GIT1Q9Y2X7 761 aa7.9□□□□□ -1.14
TRAV35-201ENST00000390462 PMM2O15305 246 aa7.89□□□□□ -1.15
TRAV35-201ENST00000390462 JMJD7P0C870 316 aa7.89□□□□□ -1.15
TRAV35-201ENST00000390462 MYBL2P10244 700 aa7.89□□□□□ -1.15
TRAV35-201ENST00000390462 FGFR1P11362 822 aa7.89□□□□□ -1.15
TRAV35-201ENST00000390462 LPOP22079 712 aaPredicted RBP7.89□□□□□ -1.15
TRAV35-201ENST00000390462 FLT3P36888 993 aa7.89□□□□□ -1.15
TRAV35-201ENST00000390462 RNF144AP50876 292 aaPredicted RBP7.89□□□□□ -1.15
TRAV35-201ENST00000390462 PPP2R2AP63151 447 aa7.89□□□□□ -1.15
TRAV35-201ENST00000390462 BIRC3Q13489 604 aa7.89□□□□□ -1.15
TRAV35-201ENST00000390462 GALEQ14376 348 aa7.89□□□□□ -1.15
TRAV35-201ENST00000390462 PUM3Q15397 648 aaKnown RBP7.89□□□□□ -1.15
TRAV35-201ENST00000390462 CFAP100Q494V2 611 aa7.89□□□□□ -1.15
TRAV35-201ENST00000390462 OVOS1Q6IE37 1185 aa7.89□□□□□ -1.15
TRAV35-201ENST00000390462 SULF2Q8IWU5 870 aa7.89□□□□□ -1.15
TRAV35-201ENST00000390462 CYP4X1Q8N118 509 aa7.89□□□□□ -1.15
TRAV35-201ENST00000390462 CBARPQ8N350 705 aaPredicted RBP7.89□□□□□ -1.15
TRAV35-201ENST00000390462 CPA6Q8N4T0 437 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms