RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 PDE6BP35913 854 aa8.92□□□□□ -0.98
TRBV28-201ENST00000390400 NASPP49321 788 aaPredicted RBP8.92□□□□□ -0.98
TRBV28-201ENST00000390400 ATP8B2P98198 1209 aa8.92□□□□□ -0.98
TRBV28-201ENST00000390400 DMTNQ08495 405 aa8.92□□□□□ -0.98
TRBV28-201ENST00000390400 MMRN1Q13201 1228 aa8.92□□□□□ -0.98
TRBV28-201ENST00000390400 MTX1Q13505 466 aa8.92□□□□□ -0.98
TRBV28-201ENST00000390400 HDAC1Q13547 482 aaPredicted RBP8.92□□□□□ -0.98
TRBV28-201ENST00000390400 SF3B3Q15393 1217 aaKnown RBP8.92□□□□□ -0.98
TRBV28-201ENST00000390400 SASS6Q6UVJ0 657 aa8.92□□□□□ -0.98
TRBV28-201ENST00000390400 RPAP2Q8IXW5 612 aaPredicted RBP8.92□□□□□ -0.98
TRBV28-201ENST00000390400 TMEM87AQ8NBN3 555 aa8.92□□□□□ -0.98
TRBV28-201ENST00000390400 TTLL11Q8NHH1 800 aa8.92□□□□□ -0.98
TRBV28-201ENST00000390400 SUSD3Q96L08 255 aa8.92□□□□□ -0.98
TRBV28-201ENST00000390400 CSRNP1Q96S65 589 aa8.92□□□□□ -0.98
TRBV28-201ENST00000390400 C22orf23Q9BZE7 217 aa8.92□□□□□ -0.98
TRBV28-201ENST00000390400 KIF13BQ9NQT8 1826 aa8.91□□□□□ -0.98
TRBV28-201ENST00000390400 RTL9Q8NET4 1388 aa8.91□□□□□ -0.98
TRBV28-201ENST00000390400 PNMA6EA0A0J9YXQ4 647 aa8.91□□□□□ -0.98
TRBV28-201ENST00000390400 EIF1AYO14602 144 aaKnown RBP8.91□□□□□ -0.98
TRBV28-201ENST00000390400 SCAMP3O14828 347 aaKnown RBP8.91□□□□□ -0.98
TRBV28-201ENST00000390400 ERCC5P28715 1186 aaPredicted RBP8.91□□□□□ -0.98
TRBV28-201ENST00000390400 FGD1P98174 961 aa8.91□□□□□ -0.98
TRBV28-201ENST00000390400 FANCCQ00597 558 aa8.91□□□□□ -0.98
TRBV28-201ENST00000390400 IFIT5Q13325 482 aaKnown RBP8.91□□□□□ -0.98
TRBV28-201ENST00000390400 CCDC57Q2TAC2 916 aa8.91□□□□□ -0.98
TRBV28-201ENST00000390400 CRY2Q49AN0 593 aa8.91□□□□□ -0.98
TRBV28-201ENST00000390400 NAALADL2Q58DX5 795 aa8.91□□□□□ -0.98
TRBV28-201ENST00000390400 TAF7LQ5H9L4 462 aa8.91□□□□□ -0.98
TRBV28-201ENST00000390400 PI16Q6UXB8 463 aa8.91□□□□□ -0.98
TRBV28-201ENST00000390400 DDX46Q7L014 1031 aaKnown RBP8.91□□□□□ -0.98
TRBV28-201ENST00000390400 RPGRQ92834 1020 aaKnown RBP8.91□□□□□ -0.98
TRBV28-201ENST00000390400 CCDC94Q9BW85 323 aaPredicted RBP8.91□□□□□ -0.98
TRBV28-201ENST00000390400 PANK2Q9BZ23 570 aa8.91□□□□□ -0.98
TRBV28-201ENST00000390400 GREM2Q9H772 168 aa8.91□□□□□ -0.98
TRBV28-201ENST00000390400 CCDC39Q9UFE4 941 aa8.91□□□□□ -0.98
TRBV28-201ENST00000390400 PDZRN3Q9UPQ7 1066 aa8.91□□□□□ -0.98
TRBV28-201ENST00000390400 ANKRD18BA2A2Z9 1011 aa8.9□□□□□ -0.98
TRBV28-201ENST00000390400 KLRG2A4D1S0 409 aaPredicted RBP8.9□□□□□ -0.98
TRBV28-201ENST00000390400 H0YIN7 160 aa8.9□□□□□ -0.98
TRBV28-201ENST00000390400 SPINT1O43278 529 aa8.9□□□□□ -0.98
TRBV28-201ENST00000390400 SORBS3O60504 671 aa8.9□□□□□ -0.98
TRBV28-201ENST00000390400 ATP4AP20648 1035 aa8.9□□□□□ -0.98
TRBV28-201ENST00000390400 ITGA6P23229 1130 aa8.9□□□□□ -0.98
TRBV28-201ENST00000390400 NUCB2P80303 420 aa8.9□□□□□ -0.98
TRBV28-201ENST00000390400 POU4F2Q12837 409 aa8.9□□□□□ -0.98
TRBV28-201ENST00000390400 PSMD2Q13200 908 aa8.9□□□□□ -0.98
TRBV28-201ENST00000390400 TRIP4Q15650 581 aaPredicted RBP8.9□□□□□ -0.98
TRBV28-201ENST00000390400 C2CD5Q86YS7 1000 aa8.9□□□□□ -0.98
TRBV28-201ENST00000390400 SIRT2Q8IXJ6 389 aa8.9□□□□□ -0.98
TRBV28-201ENST00000390400 CYP4X1Q8N118 509 aa8.9□□□□□ -0.98
TRBV28-201ENST00000390400 SSH3Q8TE77 659 aa8.9□□□□□ -0.98
TRBV28-201ENST00000390400 RBM17Q96I25 401 aaKnown RBP8.9□□□□□ -0.98
TRBV28-201ENST00000390400 CDC5LQ99459 802 aaKnown RBP8.9□□□□□ -0.98
TRBV28-201ENST00000390400 FOXD3Q9UJU5 478 aaPredicted RBP8.9□□□□□ -0.98
TRBV28-201ENST00000390400 COL11A2P13942 1736 aaPredicted RBP8.9□□□□□ -0.98
TRBV28-201ENST00000390400 SRGNP10124 158 aa8.89□□□□□ -0.99
TRBV28-201ENST00000390400 NPR1P16066 1061 aa8.89□□□□□ -0.99
TRBV28-201ENST00000390400 HOXA10P31260 410 aaPredicted RBP8.89□□□□□ -0.99
TRBV28-201ENST00000390400 GPC1P35052 558 aa8.89□□□□□ -0.99
TRBV28-201ENST00000390400 IGHMBP2P38935 993 aaKnown RBP8.89□□□□□ -0.99
TRBV28-201ENST00000390400 RFX5P48382 616 aaPredicted RBP8.89□□□□□ -0.99
TRBV28-201ENST00000390400 STYK1Q6J9G0 422 aa8.89□□□□□ -0.99
TRBV28-201ENST00000390400 NT5DC4Q86YG4 428 aa8.89□□□□□ -0.99
TRBV28-201ENST00000390400 RHPN1Q8TCX5 695 aa8.89□□□□□ -0.99
TRBV28-201ENST00000390400 AIDAQ96BJ3 306 aa8.89□□□□□ -0.99
TRBV28-201ENST00000390400 MASTLQ96GX5 879 aa8.89□□□□□ -0.99
TRBV28-201ENST00000390400 SEC31BQ9NQW1 1179 aa8.89□□□□□ -0.99
TRBV28-201ENST00000390400 PPP1R1BQ9UD71 204 aaPredicted RBP8.89□□□□□ -0.99
TRBV28-201ENST00000390400 ZKSCAN5Q9Y2L8 839 aa8.89□□□□□ -0.99
TRBV28-201ENST00000390400 CD2APQ9Y5K6 639 aa8.89□□□□□ -0.99
TRBV28-201ENST00000390400 TAF1P21675 1872 aa8.89□□□□□ -0.99
TRBV28-201ENST00000390400 SPEF2Q9C093 1822 aa8.89□□□□□ -0.99
TRBV28-201ENST00000390400 SPATA31C2B4DYI2 1134 aa8.88□□□□□ -0.99
TRBV28-201ENST00000390400 TGFBR3LH3BV60 316 aa8.88□□□□□ -0.99
TRBV28-201ENST00000390400 CHRNA5P30532 468 aa8.88□□□□□ -0.99
TRBV28-201ENST00000390400 IRS1P35568 1242 aa8.88□□□□□ -0.99
TRBV28-201ENST00000390400 TGFB2P61812 414 aa8.88□□□□□ -0.99
TRBV28-201ENST00000390400 RBM10P98175 930 aaKnown RBP8.88□□□□□ -0.99
TRBV28-201ENST00000390400 OS9Q13438 667 aaPredicted RBP8.88□□□□□ -0.99
TRBV28-201ENST00000390400 GRAPQ13588 217 aa8.88□□□□□ -0.99
TRBV28-201ENST00000390400 ANKRD18AQ8IVF6 992 aa8.88□□□□□ -0.99
TRBV28-201ENST00000390400 KLHDC4Q8TBB5 520 aa8.88□□□□□ -0.99
TRBV28-201ENST00000390400 GRAPLQ8TC17 118 aaPredicted RBP8.88□□□□□ -0.99
TRBV28-201ENST00000390400 PIK3R5Q8WYR1 880 aa8.88□□□□□ -0.99
TRBV28-201ENST00000390400 ZNF622Q969S3 477 aaKnown RBP eCLIP8.88□□□□□ -0.99
TRBV28-201ENST00000390400 CRAMP1Q96RY5 1269 aa8.88□□□□□ -0.99
TRBV28-201ENST00000390400 MPHOSPH8Q99549 860 aa8.88□□□□□ -0.99
TRBV28-201ENST00000390400 CWC22Q9HCG8 908 aaKnown RBP8.88□□□□□ -0.99
TRBV28-201ENST00000390400 COPRSQ9NQ92 184 aa8.88□□□□□ -0.99
TRBV28-201ENST00000390400 VTI1BQ9UEU0 232 aa8.88□□□□□ -0.99
TRBV28-201ENST00000390400 V9GY48 417 aaPredicted RBP8.88□□□□□ -0.99
TRBV28-201ENST00000390400 DLEC1Q9Y238 1755 aa8.88□□□□□ -0.99
TRBV28-201ENST00000390400 LRP5O75197 1615 aa8.87□□□□□ -0.99
TRBV28-201ENST00000390400 SURF6O75683 361 aaKnown RBP8.87□□□□□ -0.99
TRBV28-201ENST00000390400 DPEP1P16444 411 aa8.87□□□□□ -0.99
TRBV28-201ENST00000390400 INPP5BP32019 993 aa8.87□□□□□ -0.99
TRBV28-201ENST00000390400 USP5P45974 858 aa8.87□□□□□ -0.99
TRBV28-201ENST00000390400 IDH3AP50213 366 aa8.87□□□□□ -0.99
TRBV28-201ENST00000390400 RPS8P62241 208 aaKnown RBP8.87□□□□□ -0.99
TRBV28-201ENST00000390400 PTPN12Q05209 780 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms