RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 GAKO14976 1311 aa11.7□□□□□ -0.54
LTN1-203ENST00000389195 KIAA1551Q9HCM1 1747 aa11.7□□□□□ -0.54
LTN1-203ENST00000389195 TCP10L2B9ZVM9 353 aa11.69□□□□□ -0.54
LTN1-203ENST00000389195 COBLO75128 1261 aa11.69□□□□□ -0.54
LTN1-203ENST00000389195 MYH6P13533 1939 aa11.69□□□□□ -0.54
LTN1-203ENST00000389195 MCM7P33993 719 aa11.69□□□□□ -0.54
LTN1-203ENST00000389195 KCTD1Q719H9 257 aa11.69□□□□□ -0.54
LTN1-203ENST00000389195 SH3BP5LQ7L8J4 393 aa11.69□□□□□ -0.54
LTN1-203ENST00000389195 TTC12Q9H892 705 aaPredicted RBP11.69□□□□□ -0.54
LTN1-203ENST00000389195 KLRF2D3W0D1 207 aa11.69□□□□□ -0.54
LTN1-203ENST00000389195 ZNF165P49910 485 aa11.69□□□□□ -0.54
LTN1-203ENST00000389195 CCDC173Q0VFZ6 552 aa11.69□□□□□ -0.54
LTN1-203ENST00000389195 ZRSR1Q15695 479 aaKnown RBP11.69□□□□□ -0.54
LTN1-203ENST00000389195 DPCR1Q3MIW9 517 aa11.69□□□□□ -0.54
LTN1-203ENST00000389195 RBM26Q5T8P6 1007 aaKnown RBP11.69□□□□□ -0.54
LTN1-203ENST00000389195 C16orf86Q6ZW13 317 aa11.69□□□□□ -0.54
LTN1-203ENST00000389195 CCDC84Q86UT8 332 aaPredicted RBP11.69□□□□□ -0.54
LTN1-203ENST00000389195 RNF26Q9BY78 433 aaPredicted RBP11.69□□□□□ -0.54
LTN1-203ENST00000389195 DDX19AQ9NUU7 478 aaKnown RBP11.69□□□□□ -0.54
LTN1-203ENST00000389195 MYH15Q9Y2K3 1946 aa11.69□□□□□ -0.54
LTN1-203ENST00000389195 CDK5RAP2Q96SN8 1893 aa11.69□□□□□ -0.54
LTN1-203ENST00000389195 TNS1Q9HBL0 1735 aaKnown RBP11.69□□□□□ -0.54
LTN1-203ENST00000389195 SNED1Q8TER0 1413 aa11.68□□□□□ -0.54
LTN1-203ENST00000389195 PRPF3O43395 683 aaKnown RBP11.68□□□□□ -0.54
LTN1-203ENST00000389195 PTMAP06454 111 aaKnown RBP11.68□□□□□ -0.54
LTN1-203ENST00000389195 SCG2P13521 617 aa11.68□□□□□ -0.54
LTN1-203ENST00000389195 R3HDM1Q15032 1099 aaKnown RBP11.68□□□□□ -0.54
LTN1-203ENST00000389195 FOXP4Q8IVH2 680 aaPredicted RBP11.68□□□□□ -0.54
LTN1-203ENST00000389195 PLIN2Q99541 437 aa11.68□□□□□ -0.54
LTN1-203ENST00000389195 PHF20Q9BVI0 1012 aa11.68□□□□□ -0.54
LTN1-203ENST00000389195 FAM198AQ9UFP1 575 aa11.68□□□□□ -0.54
LTN1-203ENST00000389195 NRBP1Q9UHY1 535 aa11.68□□□□□ -0.54
LTN1-203ENST00000389195 WWC2Q6AWC2 1192 aa11.68□□□□□ -0.54
LTN1-203ENST00000389195 KCNG4Q8TDN1 519 aa11.68□□□□□ -0.54
LTN1-203ENST00000389195 COA7Q96BR5 231 aa11.68□□□□□ -0.54
LTN1-203ENST00000389195 PIGSQ96S52 555 aa11.68□□□□□ -0.54
LTN1-203ENST00000389195 PPP1R9BQ96SB3 815 aa11.68□□□□□ -0.54
LTN1-203ENST00000389195 NUP88Q99567 741 aaPredicted RBP11.68□□□□□ -0.54
LTN1-203ENST00000389195 CSRNP2Q9H175 543 aa11.68□□□□□ -0.54
LTN1-203ENST00000389195 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.68□□□□□ -0.54
LTN1-203ENST00000389195 LTBP1Q14766 1721 aa11.68□□□□□ -0.54
LTN1-203ENST00000389195 A0A087X0B3 334 aa11.67□□□□□ -0.54
LTN1-203ENST00000389195 ESPNB1AK53 854 aa11.67□□□□□ -0.54
LTN1-203ENST00000389195 POLR2DO15514 142 aaKnown RBP11.67□□□□□ -0.54
LTN1-203ENST00000389195 EGFRP00533 1210 aa11.67□□□□□ -0.54
LTN1-203ENST00000389195 PDIA4P13667 645 aaKnown RBP11.67□□□□□ -0.54
LTN1-203ENST00000389195 SHMT1P34896 483 aa11.67□□□□□ -0.54
LTN1-203ENST00000389195 SYKP43405 635 aa11.67□□□□□ -0.54
LTN1-203ENST00000389195 BAG6P46379 1132 aa11.67□□□□□ -0.54
LTN1-203ENST00000389195 RRP1BQ14684 758 aaKnown RBP11.67□□□□□ -0.54
LTN1-203ENST00000389195 MIGA2Q7L4E1 593 aa11.67□□□□□ -0.54
LTN1-203ENST00000389195 GJA10Q969M2 543 aa11.67□□□□□ -0.54
LTN1-203ENST00000389195 SERPINB13Q9UIV8 391 aa11.67□□□□□ -0.54
LTN1-203ENST00000389195 DDX60LQ5H9U9 1706 aaKnown RBP11.67□□□□□ -0.54
LTN1-203ENST00000389195 MYH1P12882 1939 aa11.67□□□□□ -0.54
LTN1-203ENST00000389195 VWA3AA6NCI4 1184 aa11.67□□□□□ -0.54
LTN1-203ENST00000389195 YEATS4O95619 227 aa11.67□□□□□ -0.54
LTN1-203ENST00000389195 PRR29P0C7W0 189 aa11.67□□□□□ -0.54
LTN1-203ENST00000389195 KRT2P35908 639 aa11.67□□□□□ -0.54
LTN1-203ENST00000389195 PODNQ7Z5L7 613 aa11.67□□□□□ -0.54
LTN1-203ENST00000389195 SPICE1Q8N0Z3 855 aa11.67□□□□□ -0.54
LTN1-203ENST00000389195 LARGE2Q8N3Y3 721 aa11.67□□□□□ -0.54
LTN1-203ENST00000389195 FAM163AQ96GL9 167 aaPredicted RBP11.67□□□□□ -0.54
LTN1-203ENST00000389195 OSBPL5Q9H0X9 879 aaPredicted RBP11.67□□□□□ -0.54
LTN1-203ENST00000389195 STK36Q9NRP7 1315 aa11.67□□□□□ -0.54
LTN1-203ENST00000389195 PP2D1A8MPX8 630 aa11.66□□□□□ -0.54
LTN1-203ENST00000389195 PSMD14O00487 310 aa11.66□□□□□ -0.54
LTN1-203ENST00000389195 DDAH1O94760 285 aa11.66□□□□□ -0.54
LTN1-203ENST00000389195 DGKHQ86XP1 1220 aa11.66□□□□□ -0.54
LTN1-203ENST00000389195 TTLL6Q8N841 843 aa11.66□□□□□ -0.54
LTN1-203ENST00000389195 CNKSR1Q969H4 720 aa11.66□□□□□ -0.54
LTN1-203ENST00000389195 TMEM260Q9NX78 707 aa11.66□□□□□ -0.54
LTN1-203ENST00000389195 FZD1Q9UP38 647 aa11.66□□□□□ -0.54
LTN1-203ENST00000389195 AFMP43652 599 aa11.66□□□□□ -0.54
LTN1-203ENST00000389195 PTGDRQ13258 359 aa11.66□□□□□ -0.54
LTN1-203ENST00000389195 IL17AQ16552 155 aa11.66□□□□□ -0.54
LTN1-203ENST00000389195 INF2Q27J81 1249 aa11.66□□□□□ -0.54
LTN1-203ENST00000389195 CFAP100Q494V2 611 aa11.66□□□□□ -0.54
LTN1-203ENST00000389195 WASF1Q92558 559 aa11.66□□□□□ -0.54
LTN1-203ENST00000389195 PDLIM2Q96JY6 352 aa11.66□□□□□ -0.54
LTN1-203ENST00000389195 COL4A5P29400 1685 aa11.66□□□□□ -0.54
LTN1-203ENST00000389195 BRCA2P51587 3418 aa11.66□□□□□ -0.54
LTN1-203ENST00000389195 LETM1O95202 739 aaPredicted RBP11.66□□□□□ -0.54
LTN1-203ENST00000389195 PFKFB3Q16875 520 aaPredicted RBP11.66□□□□□ -0.54
LTN1-203ENST00000389195 STYK1Q6J9G0 422 aa11.66□□□□□ -0.54
LTN1-203ENST00000389195 NEDD1Q8NHV4 660 aa11.66□□□□□ -0.54
LTN1-203ENST00000389195 FOXP1Q9H334 677 aaPredicted RBP11.66□□□□□ -0.54
LTN1-203ENST00000389195 VEZTQ9HBM0 779 aa11.66□□□□□ -0.54
LTN1-203ENST00000389195 MTMR4Q9NYA4 1195 aa11.66□□□□□ -0.54
LTN1-203ENST00000389195 FBXO2Q9UK22 296 aaPredicted RBP11.66□□□□□ -0.54
LTN1-203ENST00000389195 KCNH3Q9ULD8 1083 aa11.66□□□□□ -0.54
LTN1-203ENST00000389195 PLCG2P16885 1265 aa11.65□□□□□ -0.54
LTN1-203ENST00000389195 CMA1P23946 247 aa11.65□□□□□ -0.54
LTN1-203ENST00000389195 GABPAQ06546 454 aa11.65□□□□□ -0.54
LTN1-203ENST00000389195 ARID5BQ14865 1188 aa11.65□□□□□ -0.54
LTN1-203ENST00000389195 SEPT2Q15019 361 aa11.65□□□□□ -0.54
LTN1-203ENST00000389195 AOPEPQ8N6M6 819 aa11.65□□□□□ -0.54
LTN1-203ENST00000389195 FAM200AQ8TCP9 573 aa11.65□□□□□ -0.54
LTN1-203ENST00000389195 RBM28Q9NW13 759 aaKnown RBP11.65□□□□□ -0.54
LTN1-203ENST00000389195 BIN2Q9UBW5 565 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms