RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 ZNF365Q70YC5 407 aa16.5■□□□□ 0.23
LRRK1-201ENST00000388948 TICAM2Q86XR7 235 aa16.5■□□□□ 0.23
LRRK1-201ENST00000388948 UBL4BQ8N7F7 174 aa16.5■□□□□ 0.23
LRRK1-201ENST00000388948 SEPT14Q6ZU15 432 aa16.49■□□□□ 0.23
LRRK1-201ENST00000388948 GIGYF1O75420 1035 aaPredicted RBP16.49■□□□□ 0.23
LRRK1-201ENST00000388948 SND1Q7KZF4 910 aaKnown RBP eCLIP16.49■□□□□ 0.23
LRRK1-201ENST00000388948 LEMD3Q9Y2U8 911 aa16.49■□□□□ 0.23
LRRK1-201ENST00000388948 NPHP4O75161 1426 aaPredicted RBP16.49■□□□□ 0.23
LRRK1-201ENST00000388948 USP14P54578 494 aa16.49■□□□□ 0.23
LRRK1-201ENST00000388948 TTLL6Q8N841 843 aa16.49■□□□□ 0.23
LRRK1-201ENST00000388948 C2orf69Q8N8R5 385 aa16.49■□□□□ 0.23
LRRK1-201ENST00000388948 CLUL1Q15846 466 aa16.49■□□□□ 0.23
LRRK1-201ENST00000388948 LRMPQ12912 555 aa16.49■□□□□ 0.23
LRRK1-201ENST00000388948 MCM6Q14566 821 aa16.49■□□□□ 0.23
LRRK1-201ENST00000388948 TESK2Q96S53 571 aa16.49■□□□□ 0.23
LRRK1-201ENST00000388948 KDM3AQ9Y4C1 1321 aa16.49■□□□□ 0.23
LRRK1-201ENST00000388948 MYL5Q02045 173 aa16.48■□□□□ 0.23
LRRK1-201ENST00000388948 CCDC26Q8TAB7 109 aa16.48■□□□□ 0.23
LRRK1-201ENST00000388948 LLPHQ9BRT6 129 aaKnown RBP16.48■□□□□ 0.23
LRRK1-201ENST00000388948 ZHX1Q9UKY1 873 aaPredicted RBP16.48■□□□□ 0.23
LRRK1-201ENST00000388948 PCDHB13Q9Y5F0 798 aa16.48■□□□□ 0.23
LRRK1-201ENST00000388948 KCNQ3O43525 872 aa16.48■□□□□ 0.23
LRRK1-201ENST00000388948 CYP2J2P51589 502 aa16.48■□□□□ 0.23
LRRK1-201ENST00000388948 MCTP2Q6DN12 878 aa16.48■□□□□ 0.23
LRRK1-201ENST00000388948 TEKT3Q9BXF9 490 aa16.48■□□□□ 0.23
LRRK1-201ENST00000388948 CTTNBP2NLQ9P2B4 639 aa16.48■□□□□ 0.23
LRRK1-201ENST00000388948 ADD3Q9UEY8 706 aaKnown RBP16.48■□□□□ 0.23
LRRK1-201ENST00000388948 PLEKHG3A1L390 1219 aa16.48■□□□□ 0.23
LRRK1-201ENST00000388948 BBOX1O75936 387 aa16.48■□□□□ 0.23
LRRK1-201ENST00000388948 GOLGA8HP0CJ92 632 aa16.48■□□□□ 0.23
LRRK1-201ENST00000388948 PNMA1Q8ND90 353 aa16.48■□□□□ 0.23
LRRK1-201ENST00000388948 ZSCAN10Q96SZ4 725 aaPredicted RBP16.48■□□□□ 0.23
LRRK1-201ENST00000388948 PCDHA12Q9UN75 941 aa16.48■□□□□ 0.23
LRRK1-201ENST00000388948 PNMA6EA0A0J9YXQ4 647 aa16.48■□□□□ 0.23
LRRK1-201ENST00000388948 PAK1Q13153 545 aa16.48■□□□□ 0.23
LRRK1-201ENST00000388948 ARHGAP44Q17R89 818 aa16.48■□□□□ 0.23
LRRK1-201ENST00000388948 TMC4Q7Z404 712 aa16.48■□□□□ 0.23
LRRK1-201ENST00000388948 ZBED2Q9BTP6 218 aa16.48■□□□□ 0.23
LRRK1-201ENST00000388948 DMP1Q13316 513 aaPredicted RBP16.48■□□□□ 0.23
LRRK1-201ENST00000388948 ANKFY1Q9P2R3 1169 aa16.48■□□□□ 0.23
LRRK1-201ENST00000388948 ZBTB7BO15156 539 aaPredicted RBP16.48■□□□□ 0.23
LRRK1-201ENST00000388948 CC2D2BQ6DHV5 1058 aa16.48■□□□□ 0.23
LRRK1-201ENST00000388948 CIAPIN1Q6FI81 312 aa16.48■□□□□ 0.23
LRRK1-201ENST00000388948 PLA2G4DQ86XP0 818 aa16.48■□□□□ 0.23
LRRK1-201ENST00000388948 MICAL1Q8TDZ2 1067 aa16.48■□□□□ 0.23
LRRK1-201ENST00000388948 KLRF2D3W0D1 207 aa16.47■□□□□ 0.23
LRRK1-201ENST00000388948 PCCAP05165 728 aaPredicted RBP16.47■□□□□ 0.23
LRRK1-201ENST00000388948 CDC37L1Q7L3B6 337 aa16.47■□□□□ 0.23
LRRK1-201ENST00000388948 KRT26Q7Z3Y9 468 aa16.47■□□□□ 0.23
LRRK1-201ENST00000388948 ZNF654Q8IZM8 581 aa16.47■□□□□ 0.23
LRRK1-201ENST00000388948 ATRIPQ8WXE1 791 aa16.47■□□□□ 0.23
LRRK1-201ENST00000388948 CACYBPQ9HB71 228 aaKnown RBP16.47■□□□□ 0.23
LRRK1-201ENST00000388948 AKR1B15C9JRZ8 316 aaPredicted RBP16.47■□□□□ 0.23
LRRK1-201ENST00000388948 ITKQ08881 620 aa16.47■□□□□ 0.23
LRRK1-201ENST00000388948 GREM2Q9H772 168 aa16.47■□□□□ 0.23
LRRK1-201ENST00000388948 ARFGAP3Q9NP61 516 aa16.47■□□□□ 0.23
LRRK1-201ENST00000388948 PIM2Q9P1W9 311 aa16.47■□□□□ 0.23
LRRK1-201ENST00000388948 MMP10P09238 476 aa16.47■□□□□ 0.23
LRRK1-201ENST00000388948 SYNRGQ9UMZ2 1314 aa16.47■□□□□ 0.23
LRRK1-201ENST00000388948 OPA1O60313 960 aa16.47■□□□□ 0.23
LRRK1-201ENST00000388948 RNASE9P60153 205 aaKnown RBP16.47■□□□□ 0.23
LRRK1-201ENST00000388948 PLCB4Q15147 1175 aa16.47■□□□□ 0.23
LRRK1-201ENST00000388948 CMTR1Q8N1G2 835 aaKnown RBP16.47■□□□□ 0.23
LRRK1-201ENST00000388948 ZBTB7AO95365 584 aa16.46■□□□□ 0.23
LRRK1-201ENST00000388948 ZSCAN20P17040 1043 aaPredicted RBP16.46■□□□□ 0.23
LRRK1-201ENST00000388948 IL6STP40189 918 aaPredicted RBP16.46■□□□□ 0.23
LRRK1-201ENST00000388948 VAV2P52735 878 aa16.46■□□□□ 0.23
LRRK1-201ENST00000388948 BSPRYQ5W0U4 402 aa16.46■□□□□ 0.23
LRRK1-201ENST00000388948 GPBP1Q86WP2 473 aa16.46■□□□□ 0.23
LRRK1-201ENST00000388948 UBLCP1Q8WVY7 318 aaPredicted RBP16.46■□□□□ 0.23
LRRK1-201ENST00000388948 PARD3Q8TEW0 1356 aa16.46■□□□□ 0.23
LRRK1-201ENST00000388948 SLFN12Q8IYM2 578 aa16.46■□□□□ 0.23
LRRK1-201ENST00000388948 RTKN2Q8IZC4 609 aa16.46■□□□□ 0.23
LRRK1-201ENST00000388948 SEMA3EO15041 775 aa16.46■□□□□ 0.23
LRRK1-201ENST00000388948 CUTAO60888 179 aa16.46■□□□□ 0.23
LRRK1-201ENST00000388948 BEND3Q5T5X7 828 aa16.46■□□□□ 0.23
LRRK1-201ENST00000388948 SCYL2Q6P3W7 929 aa16.46■□□□□ 0.23
LRRK1-201ENST00000388948 IFNL3Q8IZI9 196 aa16.46■□□□□ 0.23
LRRK1-201ENST00000388948 MYO1AQ9UBC5 1043 aa16.46■□□□□ 0.23
LRRK1-201ENST00000388948 K7ENM7 598 aa16.46■□□□□ 0.23
LRRK1-201ENST00000388948 ZBTB1Q9Y2K1 713 aa16.46■□□□□ 0.23
LRRK1-201ENST00000388948 TMEM191BP0C7N4 346 aa16.46■□□□□ 0.23
LRRK1-201ENST00000388948 FAM160A1Q05DH4 1040 aa16.46■□□□□ 0.23
LRRK1-201ENST00000388948 SEPT9Q9UHD8 586 aaPredicted RBP16.46■□□□□ 0.23
LRRK1-201ENST00000388948 ZNF335Q9H4Z2 1342 aaPredicted RBP16.46■□□□□ 0.23
LRRK1-201ENST00000388948 HSPA1LP34931 641 aa16.46■□□□□ 0.22
LRRK1-201ENST00000388948 ANKS4BQ8N8V4 417 aa16.46■□□□□ 0.22
LRRK1-201ENST00000388948 HESX1Q9UBX0 185 aa16.46■□□□□ 0.22
LRRK1-201ENST00000388948 CFAP74Q9C0B2 1584 aa16.46■□□□□ 0.22
LRRK1-201ENST00000388948 TYW5A2RUC4 315 aaKnown RBP16.45■□□□□ 0.22
LRRK1-201ENST00000388948 PTPRKQ15262 1439 aa16.45■□□□□ 0.22
LRRK1-201ENST00000388948 PEG3Q9GZU2 1588 aa16.45■□□□□ 0.22
LRRK1-201ENST00000388948 FAM170AA1A519 330 aa16.45■□□□□ 0.22
LRRK1-201ENST00000388948 IGSF22Q8N9C0 903 aa16.45■□□□□ 0.22
LRRK1-201ENST00000388948 XRCC6P12956 609 aaKnown RBP eCLIP16.45■□□□□ 0.22
LRRK1-201ENST00000388948 TLR3O15455 904 aaKnown RBP16.45■□□□□ 0.22
LRRK1-201ENST00000388948 TECP42680 631 aa16.45■□□□□ 0.22
LRRK1-201ENST00000388948 SLC9C1Q4G0N8 1177 aa16.45■□□□□ 0.22
LRRK1-201ENST00000388948 CEP128Q6ZU80 1094 aa16.45■□□□□ 0.22
LRRK1-201ENST00000388948 PARP2Q9UGN5 583 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms