RNA–Protein interactions for RNA: ENST00000381565.2

APOBEC3F-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3F, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-202ENST00000381565 GNRH1P01148 92 aa13.79□□□□□ -0.2
APOBEC3F-202ENST00000381565 SDSP20132 328 aa13.79□□□□□ -0.2
APOBEC3F-202ENST00000381565 OSBPP22059 807 aa13.79□□□□□ -0.2
APOBEC3F-202ENST00000381565 HOXA7P31268 230 aaPredicted RBP13.79□□□□□ -0.2
APOBEC3F-202ENST00000381565 PRMT2P55345 433 aa13.79□□□□□ -0.2
APOBEC3F-202ENST00000381565 TTC22Q5TAA0 569 aa13.79□□□□□ -0.2
APOBEC3F-202ENST00000381565 USP17L2Q6R6M4 530 aa13.79□□□□□ -0.2
APOBEC3F-202ENST00000381565 POTEEQ6S8J3 1075 aa13.79□□□□□ -0.2
APOBEC3F-202ENST00000381565 STK11IPQ8N1F8 1099 aa13.79□□□□□ -0.2
APOBEC3F-202ENST00000381565 TMOD4Q9NZQ9 345 aa13.79□□□□□ -0.2
APOBEC3F-202ENST00000381565 SRRDQ9UH36 339 aa13.79□□□□□ -0.2
APOBEC3F-202ENST00000381565 PNMA3Q9UL41 463 aa13.79□□□□□ -0.2
APOBEC3F-202ENST00000381565 ZNFX1Q9P2E3 1918 aaKnown RBP13.79□□□□□ -0.2
APOBEC3F-202ENST00000381565 APPP05067 770 aa13.78□□□□□ -0.2
APOBEC3F-202ENST00000381565 VCAM1P19320 739 aa13.78□□□□□ -0.2
APOBEC3F-202ENST00000381565 PSMC4P43686 418 aa13.78□□□□□ -0.2
APOBEC3F-202ENST00000381565 KIF22Q14807 665 aa13.78□□□□□ -0.2
APOBEC3F-202ENST00000381565 MCMDC2Q4G0Z9 681 aa13.78□□□□□ -0.2
APOBEC3F-202ENST00000381565 KIAA1755Q5JYT7 1200 aa13.78□□□□□ -0.2
APOBEC3F-202ENST00000381565 RASEFQ8IZ41 740 aa13.78□□□□□ -0.2
APOBEC3F-202ENST00000381565 SMCR8Q8TEV9 937 aaPredicted RBP13.78□□□□□ -0.2
APOBEC3F-202ENST00000381565 CCDC17Q96LX7 622 aa13.78□□□□□ -0.2
APOBEC3F-202ENST00000381565 FEZ1Q99689 392 aa13.78□□□□□ -0.2
APOBEC3F-202ENST00000381565 NAPBQ9H115 298 aa13.78□□□□□ -0.2
APOBEC3F-202ENST00000381565 PRO3102Q9H379 93 aa13.78□□□□□ -0.2
APOBEC3F-202ENST00000381565 TACC3Q9Y6A5 838 aa13.78□□□□□ -0.2
APOBEC3F-202ENST00000381565 CCDC171Q6TFL3 1326 aa13.78□□□□□ -0.2
APOBEC3F-202ENST00000381565 PLIN4Q96Q06 1357 aa13.78□□□□□ -0.2
APOBEC3F-202ENST00000381565 ZNF236Q9UL36 1845 aa13.78□□□□□ -0.2
APOBEC3F-202ENST00000381565 PEX10O60683 326 aa13.77□□□□□ -0.21
APOBEC3F-202ENST00000381565 PRDM1O75626 825 aa13.77□□□□□ -0.21
APOBEC3F-202ENST00000381565 ZMYM6O95789 1325 aa13.77□□□□□ -0.21
APOBEC3F-202ENST00000381565 ICA1Q05084 483 aa13.77□□□□□ -0.21
APOBEC3F-202ENST00000381565 PPARAQ07869 468 aa13.77□□□□□ -0.21
APOBEC3F-202ENST00000381565 PABPC4Q13310 644 aaKnown RBP eCLIP13.77□□□□□ -0.21
APOBEC3F-202ENST00000381565 FAM110CQ1W6H9 321 aa13.77□□□□□ -0.21
APOBEC3F-202ENST00000381565 ANKRD13CQ8N6S4 541 aa13.77□□□□□ -0.21
APOBEC3F-202ENST00000381565 NACAP1Q9BZK3 213 aa13.77□□□□□ -0.21
APOBEC3F-202ENST00000381565 IL25Q9H293 177 aa13.77□□□□□ -0.21
APOBEC3F-202ENST00000381565 RBM27Q9P2N5 1060 aaKnown RBP13.77□□□□□ -0.21
APOBEC3F-202ENST00000381565 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.77□□□□□ -0.21
APOBEC3F-202ENST00000381565 PLXNA1Q9UIW2 1896 aa13.76□□□□□ -0.21
APOBEC3F-202ENST00000381565 FRMPD3Q5JV73 1810 aa13.76□□□□□ -0.21
APOBEC3F-202ENST00000381565 IGKV6D-41A0A0C4DH26 115 aa13.76□□□□□ -0.21
APOBEC3F-202ENST00000381565 HSPD1P10809 573 aaKnown RBP13.76□□□□□ -0.21
APOBEC3F-202ENST00000381565 USP14P54578 494 aa13.76□□□□□ -0.21
APOBEC3F-202ENST00000381565 HERVK_113P62684 666 aa13.76□□□□□ -0.21
APOBEC3F-202ENST00000381565 IRX3P78415 501 aaPredicted RBP13.76□□□□□ -0.21
APOBEC3F-202ENST00000381565 ALX1Q15699 326 aa13.76□□□□□ -0.21
APOBEC3F-202ENST00000381565 P2RX7Q99572 595 aaKnown RBP13.76□□□□□ -0.21
APOBEC3F-202ENST00000381565 TXNRD2Q9NNW7 524 aa13.76□□□□□ -0.21
APOBEC3F-202ENST00000381565 TMX2Q9Y320 296 aa13.76□□□□□ -0.21
APOBEC3F-202ENST00000381565 COL6A3P12111 3177 aa13.75□□□□□ -0.21
APOBEC3F-202ENST00000381565 MYPNQ86TC9 1320 aa13.75□□□□□ -0.21
APOBEC3F-202ENST00000381565 CCL5P13501 91 aa13.75□□□□□ -0.21
APOBEC3F-202ENST00000381565 EEF2P13639 858 aaKnown RBP13.75□□□□□ -0.21
APOBEC3F-202ENST00000381565 GRK4P32298 578 aa13.75□□□□□ -0.21
APOBEC3F-202ENST00000381565 GJA8P48165 433 aa13.75□□□□□ -0.21
APOBEC3F-202ENST00000381565 GCLCP48506 637 aaPredicted RBP13.75□□□□□ -0.21
APOBEC3F-202ENST00000381565 PRKCZQ05513 592 aa13.75□□□□□ -0.21
APOBEC3F-202ENST00000381565 CTDSPL2Q05D32 466 aa13.75□□□□□ -0.21
APOBEC3F-202ENST00000381565 SKAP1Q86WV1 359 aa13.75□□□□□ -0.21
APOBEC3F-202ENST00000381565 NBPF3Q9H094 633 aa13.75□□□□□ -0.21
APOBEC3F-202ENST00000381565 RPAP3Q9H6T3 665 aaPredicted RBP13.75□□□□□ -0.21
APOBEC3F-202ENST00000381565 MORF4L1Q9UBU8 362 aa13.75□□□□□ -0.21
APOBEC3F-202ENST00000381565 ANAPC4Q9UJX5 808 aa13.75□□□□□ -0.21
APOBEC3F-202ENST00000381565 CNMDO75829 334 aa13.74□□□□□ -0.21
APOBEC3F-202ENST00000381565 FGAP02671 866 aa13.74□□□□□ -0.21
APOBEC3F-202ENST00000381565 GJB1P08034 283 aa13.74□□□□□ -0.21
APOBEC3F-202ENST00000381565 CWC27Q6UX04 472 aaKnown RBP13.74□□□□□ -0.21
APOBEC3F-202ENST00000381565 CATSPERGQ6ZRH7 1159 aa13.74□□□□□ -0.21
APOBEC3F-202ENST00000381565 VCPKMTQ9H867 229 aa13.74□□□□□ -0.21
APOBEC3F-202ENST00000381565 KANSL2Q9H9L4 492 aa13.74□□□□□ -0.21
APOBEC3F-202ENST00000381565 MKNK2Q9HBH9 465 aa13.74□□□□□ -0.21
APOBEC3F-202ENST00000381565 ARHGEF10LQ9HCE6 1279 aa13.74□□□□□ -0.21
APOBEC3F-202ENST00000381565 INCENPQ9NQS7 918 aa13.74□□□□□ -0.21
APOBEC3F-202ENST00000381565 DIAPH3Q9NSV4 1193 aa13.74□□□□□ -0.21
APOBEC3F-202ENST00000381565 RBPJLQ9UBG7 517 aa13.74□□□□□ -0.21
APOBEC3F-202ENST00000381565 GABRQQ9UN88 632 aa13.74□□□□□ -0.21
APOBEC3F-202ENST00000381565 SPDYE16A6NNV3 312 aaPredicted RBP13.73□□□□□ -0.21
APOBEC3F-202ENST00000381565 USP17L15C9J2P7 530 aa13.73□□□□□ -0.21
APOBEC3F-202ENST00000381565 USP17L13C9JLJ4 530 aa13.73□□□□□ -0.21
APOBEC3F-202ENST00000381565 USP17L11C9JVI0 530 aa13.73□□□□□ -0.21
APOBEC3F-202ENST00000381565 USP17L18D6R9N7 530 aa13.73□□□□□ -0.21
APOBEC3F-202ENST00000381565 USP17L22D6RA61 530 aa13.73□□□□□ -0.21
APOBEC3F-202ENST00000381565 USP17L17D6RBQ6 530 aa13.73□□□□□ -0.21
APOBEC3F-202ENST00000381565 USP17L19D6RCP7 530 aa13.73□□□□□ -0.21
APOBEC3F-202ENST00000381565 USP17L20D6RJB6 530 aa13.73□□□□□ -0.21
APOBEC3F-202ENST00000381565 FMNL1O95466 1100 aaPredicted RBP13.73□□□□□ -0.21
APOBEC3F-202ENST00000381565 FCGRTP55899 365 aa13.73□□□□□ -0.21
APOBEC3F-202ENST00000381565 USP17L24Q0WX57 530 aa13.73□□□□□ -0.21
APOBEC3F-202ENST00000381565 LBX2Q6XYB7 198 aa13.73□□□□□ -0.21
APOBEC3F-202ENST00000381565 CENPQQ7L2Z9 268 aaPredicted RBP13.73□□□□□ -0.21
APOBEC3F-202ENST00000381565 SPICE1Q8N0Z3 855 aa13.73□□□□□ -0.21
APOBEC3F-202ENST00000381565 RAET1EQ8TD07 263 aa13.73□□□□□ -0.21
APOBEC3F-202ENST00000381565 SMCHD1A6NHR9 2005 aa13.73□□□□□ -0.21
APOBEC3F-202ENST00000381565 HIP1O00291 1037 aa13.72□□□□□ -0.21
APOBEC3F-202ENST00000381565 FGRP09769 529 aa13.72□□□□□ -0.21
APOBEC3F-202ENST00000381565 PDE4BQ07343 736 aa13.72□□□□□ -0.21
APOBEC3F-202ENST00000381565 FAM47AQ5JRC9 791 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms