RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 FDX1P10109 184 aa7.95□□□□□ -1.14
CCDC171-201ENST00000380701 RAPGEF1Q13905 1077 aa7.95□□□□□ -1.14
CCDC171-201ENST00000380701 DAAM2Q86T65 1068 aa7.95□□□□□ -1.14
CCDC171-201ENST00000380701 CSGALNACT2Q8N6G5 542 aa7.95□□□□□ -1.14
CCDC171-201ENST00000380701 SUCLG2Q96I99 432 aa7.95□□□□□ -1.14
CCDC171-201ENST00000380701 NKIRAS1Q9NYS0 192 aa7.95□□□□□ -1.14
CCDC171-201ENST00000380701 PARP2Q9UGN5 583 aa7.95□□□□□ -1.14
CCDC171-201ENST00000380701 COL4A3BPQ9Y5P4 624 aa7.95□□□□□ -1.14
CCDC171-201ENST00000380701 SURF1Q15526 300 aa7.95□□□□□ -1.14
CCDC171-201ENST00000380701 ABCB5Q2M3G0 1257 aa7.95□□□□□ -1.14
CCDC171-201ENST00000380701 DCUN1D2Q6PH85 259 aa7.95□□□□□ -1.14
CCDC171-201ENST00000380701 CYP26C1Q6V0L0 522 aa7.95□□□□□ -1.14
CCDC171-201ENST00000380701 ARHGEF25Q86VW2 580 aa7.95□□□□□ -1.14
CCDC171-201ENST00000380701 TMTC1Q8IUR5 882 aa7.95□□□□□ -1.14
CCDC171-201ENST00000380701 COPRSQ9NQ92 184 aa7.95□□□□□ -1.14
CCDC171-201ENST00000380701 IGHDP01880 384 aa7.95□□□□□ -1.14
CCDC171-201ENST00000380701 ZNF174Q15697 407 aa7.95□□□□□ -1.14
CCDC171-201ENST00000380701 MYCT1Q8N699 235 aa7.95□□□□□ -1.14
CCDC171-201ENST00000380701 SMC1BQ8NDV3 1235 aa7.95□□□□□ -1.14
CCDC171-201ENST00000380701 USP19O94966 1318 aa7.95□□□□□ -1.14
CCDC171-201ENST00000380701 SH3BP5O60239 455 aa7.95□□□□□ -1.14
CCDC171-201ENST00000380701 TXKP42681 527 aa7.95□□□□□ -1.14
CCDC171-201ENST00000380701 SETDB1Q15047 1291 aa7.95□□□□□ -1.14
CCDC171-201ENST00000380701 SLC27A3Q5K4L6 730 aa7.95□□□□□ -1.14
CCDC171-201ENST00000380701 TSHZ3Q63HK5 1081 aa7.95□□□□□ -1.14
CCDC171-201ENST00000380701 CABP7Q86V35 215 aa7.95□□□□□ -1.14
CCDC171-201ENST00000380701 FOXP4Q8IVH2 680 aaPredicted RBP7.95□□□□□ -1.14
CCDC171-201ENST00000380701 RRP9O43818 475 aaKnown RBP7.95□□□□□ -1.14
CCDC171-201ENST00000380701 HOXD10P28358 340 aa7.95□□□□□ -1.14
CCDC171-201ENST00000380701 ZSCAN23Q3MJ62 389 aa7.95□□□□□ -1.14
CCDC171-201ENST00000380701 TSPYL6Q8N831 410 aa7.95□□□□□ -1.14
CCDC171-201ENST00000380701 SSH3Q8TE77 659 aa7.95□□□□□ -1.14
CCDC171-201ENST00000380701 USP26Q9BXU7 913 aa7.95□□□□□ -1.14
CCDC171-201ENST00000380701 PSTPIP2Q9H939 334 aa7.95□□□□□ -1.14
CCDC171-201ENST00000380701 CRCPO75575 148 aa7.94□□□□□ -1.14
CCDC171-201ENST00000380701 SERPINB2P05120 415 aa7.94□□□□□ -1.14
CCDC171-201ENST00000380701 ZBTB16Q05516 673 aa7.94□□□□□ -1.14
CCDC171-201ENST00000380701 ALCAMQ13740 583 aa7.94□□□□□ -1.14
CCDC171-201ENST00000380701 ZNF449Q6P9G9 518 aa7.94□□□□□ -1.14
CCDC171-201ENST00000380701 ABI1Q8IZP0 508 aa7.94□□□□□ -1.14
CCDC171-201ENST00000380701 RPGRIP1Q96KN7 1286 aa7.94□□□□□ -1.14
CCDC171-201ENST00000380701 ZSCAN10Q96SZ4 725 aaPredicted RBP7.94□□□□□ -1.14
CCDC171-201ENST00000380701 IMPACTQ9P2X3 320 aa7.94□□□□□ -1.14
CCDC171-201ENST00000380701 CHMP2AO43633 222 aa7.94□□□□□ -1.14
CCDC171-201ENST00000380701 GAP43P17677 238 aa7.94□□□□□ -1.14
CCDC171-201ENST00000380701 HADHQ16836 314 aaKnown RBP7.94□□□□□ -1.14
CCDC171-201ENST00000380701 ZNF215Q9UL58 517 aaPredicted RBP7.94□□□□□ -1.14
CCDC171-201ENST00000380701 SAMD9Q5K651 1589 aa7.94□□□□□ -1.14
CCDC171-201ENST00000380701 DYNC1I1O14576 645 aa7.94□□□□□ -1.14
CCDC171-201ENST00000380701 DNM1Q05193 864 aaKnown RBP7.94□□□□□ -1.14
CCDC171-201ENST00000380701 SLFN13Q68D06 897 aa7.94□□□□□ -1.14
CCDC171-201ENST00000380701 GADL1Q6ZQY3 521 aa7.94□□□□□ -1.14
CCDC171-201ENST00000380701 DPP9Q86TI2 863 aa7.94□□□□□ -1.14
CCDC171-201ENST00000380701 PSMD1Q99460 953 aa7.94□□□□□ -1.14
CCDC171-201ENST00000380701 COA1Q9GZY4 146 aa7.94□□□□□ -1.14
CCDC171-201ENST00000380701 DONSONQ9NYP3 566 aa7.94□□□□□ -1.14
CCDC171-201ENST00000380701 EIF3CLB5ME19 914 aaKnown RBP7.94□□□□□ -1.14
CCDC171-201ENST00000380701 HARSP12081 509 aaKnown RBP7.94□□□□□ -1.14
CCDC171-201ENST00000380701 MXRA7P84157 204 aa7.94□□□□□ -1.14
CCDC171-201ENST00000380701 TRIM11Q96F44 468 aa7.94□□□□□ -1.14
CCDC171-201ENST00000380701 RAB3IPQ96QF0 476 aaPredicted RBP7.94□□□□□ -1.14
CCDC171-201ENST00000380701 RPS6KC1Q96S38 1066 aa7.94□□□□□ -1.14
CCDC171-201ENST00000380701 EIF3CQ99613 913 aaKnown RBP7.94□□□□□ -1.14
CCDC171-201ENST00000380701 SMCO2A6NFE2 343 aa7.94□□□□□ -1.14
CCDC171-201ENST00000380701 GBP1P32455 592 aa7.94□□□□□ -1.14
CCDC171-201ENST00000380701 GJC1P36383 396 aa7.94□□□□□ -1.14
CCDC171-201ENST00000380701 CRKLP46109 303 aaKnown RBP7.94□□□□□ -1.14
CCDC171-201ENST00000380701 FAM47CQ5HY64 1035 aa7.94□□□□□ -1.14
CCDC171-201ENST00000380701 CIAPIN1Q6FI81 312 aa7.94□□□□□ -1.14
CCDC171-201ENST00000380701 ZNF654Q8IZM8 581 aa7.94□□□□□ -1.14
CCDC171-201ENST00000380701 GIMAP7Q8NHV1 300 aa7.94□□□□□ -1.14
CCDC171-201ENST00000380701 C16orf45Q96MC5 204 aaPredicted RBP7.94□□□□□ -1.14
CCDC171-201ENST00000380701 TRMT1Q9NXH9 659 aaKnown RBP7.94□□□□□ -1.14
CCDC171-201ENST00000380701 PBRM1Q86U86 1689 aa7.93□□□□□ -1.14
CCDC171-201ENST00000380701 MYL1P05976 194 aa7.93□□□□□ -1.14
CCDC171-201ENST00000380701 CD19P15391 556 aa7.93□□□□□ -1.14
CCDC171-201ENST00000380701 BTDP43251 543 aa7.93□□□□□ -1.14
CCDC171-201ENST00000380701 RNF187Q5TA31 235 aaPredicted RBP7.93□□□□□ -1.14
CCDC171-201ENST00000380701 METTL23Q86XA0 190 aa7.93□□□□□ -1.14
CCDC171-201ENST00000380701 ZMYND15Q9H091 742 aa7.93□□□□□ -1.14
CCDC171-201ENST00000380701 BCAP29Q9UHQ4 241 aa7.93□□□□□ -1.14
CCDC171-201ENST00000380701 LIG4P49917 911 aa7.93□□□□□ -1.14
CCDC171-201ENST00000380701 ITIH3Q06033 890 aa7.93□□□□□ -1.14
CCDC171-201ENST00000380701 NEK8Q86SG6 692 aa7.93□□□□□ -1.14
CCDC171-201ENST00000380701 BLIDQ8IZY5 108 aa7.93□□□□□ -1.14
CCDC171-201ENST00000380701 TTLL6Q8N841 843 aa7.93□□□□□ -1.14
CCDC171-201ENST00000380701 P3H4Q92791 437 aa7.93□□□□□ -1.14
CCDC171-201ENST00000380701 MASTLQ96GX5 879 aa7.93□□□□□ -1.14
CCDC171-201ENST00000380701 AK8Q96MA6 479 aa7.93□□□□□ -1.14
CCDC171-201ENST00000380701 RUNDC3BQ96NL0 473 aa7.93□□□□□ -1.14
CCDC171-201ENST00000380701 FAM8A1Q9UBU6 413 aa7.93□□□□□ -1.14
CCDC171-201ENST00000380701 PDE8BO95263 885 aa7.93□□□□□ -1.14
CCDC171-201ENST00000380701 KRT40Q6A162 431 aa7.93□□□□□ -1.14
CCDC171-201ENST00000380701 GIMAP8Q8ND71 665 aaPredicted RBP7.93□□□□□ -1.14
CCDC171-201ENST00000380701 NCAPGQ9BPX3 1015 aa7.93□□□□□ -1.14
CCDC171-201ENST00000380701 PAGR1Q9BTK6 254 aa7.93□□□□□ -1.14
CCDC171-201ENST00000380701 MRPL44Q9H9J2 332 aaKnown RBP7.93□□□□□ -1.14
CCDC171-201ENST00000380701 SYNRGQ9UMZ2 1314 aa7.93□□□□□ -1.14
CCDC171-201ENST00000380701 OVOS2A0A0G2JMS6 1433 aa7.93□□□□□ -1.14
CCDC171-201ENST00000380701 OVOS2A0A0J9YW53 1432 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms