RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 ALDH3A1P30838 453 aa10.46□□□□□ -0.74
PTPRA-204ENST00000380393 KIF5BP33176 963 aa10.46□□□□□ -0.74
PTPRA-204ENST00000380393 HDLBPQ00341 1268 aaKnown RBP10.46□□□□□ -0.74
PTPRA-204ENST00000380393 TMED1Q13445 227 aa10.46□□□□□ -0.74
PTPRA-204ENST00000380393 WDR93Q6P2C0 686 aa10.46□□□□□ -0.74
PTPRA-204ENST00000380393 USHBP1Q8N6Y0 703 aa10.46□□□□□ -0.74
PTPRA-204ENST00000380393 CCDC148Q8NFR7 591 aa10.46□□□□□ -0.74
PTPRA-204ENST00000380393 PGBD1Q96JS3 809 aa10.46□□□□□ -0.74
PTPRA-204ENST00000380393 RHBDL2Q9NX52 303 aa10.46□□□□□ -0.74
PTPRA-204ENST00000380393 RABL2BQ9UNT1 228 aa10.46□□□□□ -0.74
PTPRA-204ENST00000380393 SPG7Q9UQ90 795 aa10.46□□□□□ -0.74
PTPRA-204ENST00000380393 FMN2Q9NZ56 1722 aa10.46□□□□□ -0.74
PTPRA-204ENST00000380393 MST1RQ04912 1400 aa10.45□□□□□ -0.74
PTPRA-204ENST00000380393 SSH2Q76I76 1423 aa10.45□□□□□ -0.74
PTPRA-204ENST00000380393 DNM1LO00429 736 aa10.45□□□□□ -0.74
PTPRA-204ENST00000380393 PABPC4Q13310 644 aaKnown RBP eCLIP10.45□□□□□ -0.743e-13■■■■■ 32.1
PTPRA-204ENST00000380393 SLC35B4Q969S0 331 aa10.45□□□□□ -0.74
PTPRA-204ENST00000380393 EPN3Q9H201 632 aa10.45□□□□□ -0.74
PTPRA-204ENST00000380393 SWAP70Q9UH65 585 aa10.45□□□□□ -0.74
PTPRA-204ENST00000380393 WDR37Q9Y2I8 494 aa10.45□□□□□ -0.74
PTPRA-204ENST00000380393 SHPRHQ149N8 1683 aa10.45□□□□□ -0.74
PTPRA-204ENST00000380393 STXBP3O00186 592 aa10.45□□□□□ -0.74
PTPRA-204ENST00000380393 N4BP3O15049 544 aa10.45□□□□□ -0.74
PTPRA-204ENST00000380393 PFKFB2O60825 505 aa10.45□□□□□ -0.74
PTPRA-204ENST00000380393 CLTAP09496 248 aa10.45□□□□□ -0.74
PTPRA-204ENST00000380393 CNGA1P29973 690 aa10.45□□□□□ -0.74
PTPRA-204ENST00000380393 AMPHP49418 695 aa10.45□□□□□ -0.74
PTPRA-204ENST00000380393 RUFY3Q7L099 469 aa10.45□□□□□ -0.74
PTPRA-204ENST00000380393 CTNNBL1Q8WYA6 563 aaPredicted RBP10.45□□□□□ -0.74
PTPRA-204ENST00000380393 DESI2Q9BSY9 194 aa10.45□□□□□ -0.74
PTPRA-204ENST00000380393 ZNHIT6Q9NWK9 470 aaKnown RBP10.45□□□□□ -0.74
PTPRA-204ENST00000380393 GOLGA8KD6RF30 607 aa10.45□□□□□ -0.74
PTPRA-204ENST00000380393 ELF3P78545 371 aaPredicted RBP10.45□□□□□ -0.74
PTPRA-204ENST00000380393 PPP1R7Q15435 360 aa10.45□□□□□ -0.74
PTPRA-204ENST00000380393 TOGARAM2Q6ZUX3 1019 aa10.45□□□□□ -0.74
PTPRA-204ENST00000380393 MCM10Q7L590 875 aa10.45□□□□□ -0.74
PTPRA-204ENST00000380393 CCAR1Q8IX12 1150 aaKnown RBP10.45□□□□□ -0.74
PTPRA-204ENST00000380393 TRIML1Q8N9V2 468 aa10.45□□□□□ -0.74
PTPRA-204ENST00000380393 IL25Q9H293 177 aa10.45□□□□□ -0.74
PTPRA-204ENST00000380393 POLD4Q9HCU8 107 aa10.45□□□□□ -0.74
PTPRA-204ENST00000380393 SLC5A4Q9NY91 659 aa10.45□□□□□ -0.74
PTPRA-204ENST00000380393 NWD1Q149M9 1564 aa10.44□□□□□ -0.74
PTPRA-204ENST00000380393 NSD2O96028 1365 aa10.44□□□□□ -0.74
PTPRA-204ENST00000380393 SPDYE5A6NIY4 337 aa10.44□□□□□ -0.74
PTPRA-204ENST00000380393 ALOX15P16050 662 aaPredicted RBP10.44□□□□□ -0.74
PTPRA-204ENST00000380393 FUT4P22083 530 aa10.44□□□□□ -0.74
PTPRA-204ENST00000380393 LSP1P33241 339 aa10.44□□□□□ -0.74
PTPRA-204ENST00000380393 ABL2P42684 1182 aa10.44□□□□□ -0.74
PTPRA-204ENST00000380393 FOSBP53539 338 aa10.44□□□□□ -0.74
PTPRA-204ENST00000380393 XRCC4Q13426 336 aa10.44□□□□□ -0.74
PTPRA-204ENST00000380393 ANKRD20A8PQ5CZ79 823 aa10.44□□□□□ -0.74
PTPRA-204ENST00000380393 LCA5Q86VQ0 697 aa10.44□□□□□ -0.74
PTPRA-204ENST00000380393 SLF2Q8IX21 1173 aa10.44□□□□□ -0.74
PTPRA-204ENST00000380393 NME8Q8N427 588 aa10.44□□□□□ -0.74
PTPRA-204ENST00000380393 CXorf38Q8TB03 319 aa10.44□□□□□ -0.74
PTPRA-204ENST00000380393 CCHCR1Q8TD31 782 aa10.44□□□□□ -0.74
PTPRA-204ENST00000380393 SPIRE2Q8WWL2 714 aa10.44□□□□□ -0.74
PTPRA-204ENST00000380393 OPTNQ96CV9 577 aa10.44□□□□□ -0.74
PTPRA-204ENST00000380393 MTA3Q9BTC8 594 aa10.44□□□□□ -0.74
PTPRA-204ENST00000380393 LZTFL1Q9NQ48 299 aa10.44□□□□□ -0.74
PTPRA-204ENST00000380393 PAIP2BQ9ULR5 123 aaKnown RBP10.44□□□□□ -0.74
PTPRA-204ENST00000380393 MAP3K5Q99683 1374 aa10.44□□□□□ -0.74
PTPRA-204ENST00000380393 PFDN1O60925 122 aa10.44□□□□□ -0.74
PTPRA-204ENST00000380393 LARGE1O95461 756 aa10.44□□□□□ -0.74
PTPRA-204ENST00000380393 MCM3P25205 808 aa10.44□□□□□ -0.74
PTPRA-204ENST00000380393 SCTRP47872 440 aa10.44□□□□□ -0.74
PTPRA-204ENST00000380393 SKOR1P84550 965 aa10.44□□□□□ -0.74
PTPRA-204ENST00000380393 CHRNA2Q15822 529 aa10.44□□□□□ -0.74
PTPRA-204ENST00000380393 SPRED3Q2MJR0 410 aa10.44□□□□□ -0.74
PTPRA-204ENST00000380393 CRELD2Q6UXH1 353 aaPredicted RBP10.44□□□□□ -0.74
PTPRA-204ENST00000380393 PNMA8AQ86V59 439 aaPredicted RBP10.44□□□□□ -0.74
PTPRA-204ENST00000380393 CCT8L2Q96SF2 557 aa10.44□□□□□ -0.74
PTPRA-204ENST00000380393 BRD8Q9H0E9 1235 aa10.44□□□□□ -0.74
PTPRA-204ENST00000380393 HELLSQ9NRZ9 838 aa10.44□□□□□ -0.74
PTPRA-204ENST00000380393 HYPKQ9NX55 129 aa10.44□□□□□ -0.74
PTPRA-204ENST00000380393 ITM2BQ9Y287 266 aa10.44□□□□□ -0.74
PTPRA-204ENST00000380393 TOPAZ1Q8N9V7 1692 aa10.44□□□□□ -0.74
PTPRA-204ENST00000380393 ANKARQ7Z5J8 1434 aa10.44□□□□□ -0.74
PTPRA-204ENST00000380393 ITSN1Q15811 1721 aa10.44□□□□□ -0.74
PTPRA-204ENST00000380393 MAP3K13O43283 966 aa10.44□□□□□ -0.74
PTPRA-204ENST00000380393 KIF5CO60282 957 aa10.44□□□□□ -0.74
PTPRA-204ENST00000380393 CBX3Q13185 183 aa10.44□□□□□ -0.74
PTPRA-204ENST00000380393 KIAA0753Q2KHM9 967 aa10.44□□□□□ -0.74
PTPRA-204ENST00000380393 DPY19L2Q6NUT2 758 aa10.44□□□□□ -0.74
PTPRA-204ENST00000380393 NLRP14Q86W24 1093 aa10.44□□□□□ -0.74
PTPRA-204ENST00000380393 SMYD1Q8NB12 490 aa10.44□□□□□ -0.74
PTPRA-204ENST00000380393 OCEL1Q9H607 264 aa10.44□□□□□ -0.74
PTPRA-204ENST00000380393 GFPT2O94808 682 aa10.43□□□□□ -0.74
PTPRA-204ENST00000380393 CCDC175P0C221 793 aa10.43□□□□□ -0.74
PTPRA-204ENST00000380393 TOP1P11387 765 aaKnown RBP10.43□□□□□ -0.74
PTPRA-204ENST00000380393 LMOD1P29536 600 aaPredicted RBP10.43□□□□□ -0.74
PTPRA-204ENST00000380393 SEC24CP53992 1094 aa10.43□□□□□ -0.74
PTPRA-204ENST00000380393 FANCCQ00597 558 aa10.43□□□□□ -0.74
PTPRA-204ENST00000380393 FOXD4Q12950 439 aaPredicted RBP10.43□□□□□ -0.74
PTPRA-204ENST00000380393 EIF4A2Q14240 407 aaKnown RBP10.43□□□□□ -0.74
PTPRA-204ENST00000380393 ATL3Q6DD88 541 aa10.43□□□□□ -0.74
PTPRA-204ENST00000380393 GSPT2Q8IYD1 628 aaKnown RBP10.43□□□□□ -0.74
PTPRA-204ENST00000380393 STAG2Q8N3U4 1231 aa10.43□□□□□ -0.74
PTPRA-204ENST00000380393 PDILTQ8N807 584 aa10.43□□□□□ -0.74
PTPRA-204ENST00000380393 NEK9Q8TD19 979 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms