RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 MS4A1P11836 297 aa27.92■■■□□ 2.06
U2AF1-202ENST00000380276 ATN1P54259 1190 aaPredicted RBP27.92■■■□□ 2.06
U2AF1-202ENST00000380276 PLS1Q14651 629 aa27.92■■■□□ 2.06
U2AF1-202ENST00000380276 DCP1AQ9NPI6 582 aaPredicted RBP27.92■■■□□ 2.06
U2AF1-202ENST00000380276 HOXC10Q9NYD6 342 aa27.92■■■□□ 2.06
U2AF1-202ENST00000380276 MSCO60682 206 aa27.91■■■□□ 2.06
U2AF1-202ENST00000380276 TMEM179Q6ZVK1 233 aa27.91■■■□□ 2.06
U2AF1-202ENST00000380276 Q7L0L9 218 aa27.91■■■□□ 2.06
U2AF1-202ENST00000380276 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.91■■■□□ 2.06
U2AF1-202ENST00000380276 DYNLL2Q96FJ2 89 aa27.91■■■□□ 2.06
U2AF1-202ENST00000380276 MOV10L1Q9BXT6 1211 aaKnown RBP27.91■■■□□ 2.06
U2AF1-202ENST00000380276 TCRBV5S4A2TA0A5A2 114 aa27.9■■■□□ 2.06
U2AF1-202ENST00000380276 MYCNP04198 464 aaPredicted RBP27.9■■■□□ 2.06
U2AF1-202ENST00000380276 HOXC6P09630 235 aa27.9■■■□□ 2.06
U2AF1-202ENST00000380276 ADORA2AP29274 412 aa27.9■■■□□ 2.06
U2AF1-202ENST00000380276 LRIT3Q3SXY7 679 aa27.9■■■□□ 2.06
U2AF1-202ENST00000380276 LPAR1Q92633 364 aa27.9■■■□□ 2.06
U2AF1-202ENST00000380276 BOLA2Q9H3K6 86 aa27.9■■■□□ 2.06
U2AF1-202ENST00000380276 ARHGEF10LQ9HCE6 1279 aa27.9■■■□□ 2.06
U2AF1-202ENST00000380276 SWAP70Q9UH65 585 aa27.9■■■□□ 2.06
U2AF1-202ENST00000380276 MYH8P13535 1937 aa27.89■■■□□ 2.06
U2AF1-202ENST00000380276 MBD4O95243 580 aa27.89■■■□□ 2.06
U2AF1-202ENST00000380276 CLEC10AQ8IUN9 316 aa27.89■■■□□ 2.06
U2AF1-202ENST00000380276 RPAP2Q8IXW5 612 aaPredicted RBP27.89■■■□□ 2.06
U2AF1-202ENST00000380276 AMOTL1Q8IY63 956 aa27.89■■■□□ 2.06
U2AF1-202ENST00000380276 SPATC1LQ9H0A9 340 aa27.89■■■□□ 2.06
U2AF1-202ENST00000380276 PAG1Q9NWQ8 432 aa27.89■■■□□ 2.06
U2AF1-202ENST00000380276 COG6Q9Y2V7 657 aa27.89■■■□□ 2.06
U2AF1-202ENST00000380276 ZBED9Q6R2W3 1325 aa27.89■■■□□ 2.05
U2AF1-202ENST00000380276 PRKAB2O43741 272 aa27.88■■■□□ 2.05
U2AF1-202ENST00000380276 FLOT1O75955 427 aa27.88■■■□□ 2.05
U2AF1-202ENST00000380276 ERCC3P19447 782 aa27.88■■■□□ 2.05
U2AF1-202ENST00000380276 ICA1Q05084 483 aa27.88■■■□□ 2.05
U2AF1-202ENST00000380276 SLFNL1Q499Z3 407 aa27.88■■■□□ 2.05
U2AF1-202ENST00000380276 ANO1Q5XXA6 986 aa27.88■■■□□ 2.05
U2AF1-202ENST00000380276 NCAPG2Q86XI2 1143 aa27.88■■■□□ 2.05
U2AF1-202ENST00000380276 SPICE1Q8N0Z3 855 aa27.88■■■□□ 2.05
U2AF1-202ENST00000380276 LBHD1Q9BQE6 289 aaPredicted RBP27.88■■■□□ 2.05
U2AF1-202ENST00000380276 AKR1B1P15121 316 aa27.87■■■□□ 2.05
U2AF1-202ENST00000380276 GPR153Q6NV75 609 aa27.87■■■□□ 2.05
U2AF1-202ENST00000380276 TRPV1Q8NER1 839 aa27.87■■■□□ 2.05
U2AF1-202ENST00000380276 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.87■■■□□ 2.05
U2AF1-202ENST00000380276 SH2D4AQ9H788 454 aa27.87■■■□□ 2.05
U2AF1-202ENST00000380276 PRKAG2Q9UGJ0 569 aa27.87■■■□□ 2.05
U2AF1-202ENST00000380276 DDX19BQ9UMR2 479 aa27.87■■■□□ 2.05
U2AF1-202ENST00000380276 STRNO43815 780 aa27.86■■■□□ 2.05
U2AF1-202ENST00000380276 RAB11FIP3O75154 756 aa27.86■■■□□ 2.05
U2AF1-202ENST00000380276 KIAA1755Q5JYT7 1200 aa27.86■■■□□ 2.05
U2AF1-202ENST00000380276 GJC2Q5T442 439 aaPredicted RBP27.86■■■□□ 2.05
U2AF1-202ENST00000380276 DDRGK1Q96HY6 314 aa27.86■■■□□ 2.05
U2AF1-202ENST00000380276 DNM1LO00429 736 aa27.85■■■□□ 2.05
U2AF1-202ENST00000380276 DLL1O00548 723 aa27.85■■■□□ 2.05
U2AF1-202ENST00000380276 RAD21O60216 631 aa27.85■■■□□ 2.05
U2AF1-202ENST00000380276 CYBAP13498 195 aa27.85■■■□□ 2.05
U2AF1-202ENST00000380276 DSG3P32926 999 aa27.85■■■□□ 2.05
U2AF1-202ENST00000380276 ADD2P35612 726 aa27.85■■■□□ 2.05
U2AF1-202ENST00000380276 MB21D1Q8N884 522 aa27.85■■■□□ 2.05
U2AF1-202ENST00000380276 SHCBP1Q8NEM2 672 aa27.85■■■□□ 2.05
U2AF1-202ENST00000380276 ATG4CQ96DT6 458 aa27.85■■■□□ 2.05
U2AF1-202ENST00000380276 ATP8A2Q9NTI2 1148 aa27.85■■■□□ 2.05
U2AF1-202ENST00000380276 SLC5A4Q9NY91 659 aa27.85■■■□□ 2.05
U2AF1-202ENST00000380276 CYP2D7A0A087X1C5 515 aa27.84■■■□□ 2.05
U2AF1-202ENST00000380276 KBTBD13C9JR72 458 aa27.84■■■□□ 2.05
U2AF1-202ENST00000380276 OLFML2BQ68BL8 750 aa27.84■■■□□ 2.05
U2AF1-202ENST00000380276 ATP11BQ9Y2G3 1177 aa27.84■■■□□ 2.05
U2AF1-202ENST00000380276 BAZ2AQ9UIF9 1905 aaKnown RBP27.84■■■□□ 2.05
U2AF1-202ENST00000380276 A0A0G2JMZ2 1700 aa27.84■■■□□ 2.05
U2AF1-202ENST00000380276 ZNF236Q9UL36 1845 aa27.83■■■□□ 2.05
U2AF1-202ENST00000380276 RTP1P59025 263 aa27.83■■■□□ 2.05
U2AF1-202ENST00000380276 SIRT2Q8IXJ6 389 aa27.83■■■□□ 2.05
U2AF1-202ENST00000380276 ARRDC4Q8NCT1 418 aa27.83■■■□□ 2.05
U2AF1-202ENST00000380276 VCPKMTQ9H867 229 aa27.83■■■□□ 2.05
U2AF1-202ENST00000380276 TMX2Q9Y320 296 aa27.83■■■□□ 2.05
U2AF1-202ENST00000380276 LAMA3Q16787 3333 aa27.82■■■□□ 2.04
U2AF1-202ENST00000380276 COBLO75128 1261 aa27.82■■■□□ 2.04
U2AF1-202ENST00000380276 DIEXFQ68CQ4 756 aaKnown RBP27.82■■■□□ 2.04
U2AF1-202ENST00000380276 MROH8Q9H579 483 aa27.82■■■□□ 2.04
U2AF1-202ENST00000380276 USP17L12C9JPN9 530 aa27.81■■■□□ 2.04
U2AF1-202ENST00000380276 USP17L21D6R901 530 aa27.81■■■□□ 2.04
U2AF1-202ENST00000380276 ATP5JP18859 108 aa27.81■■■□□ 2.04
U2AF1-202ENST00000380276 CDK8P49336 464 aa27.81■■■□□ 2.04
U2AF1-202ENST00000380276 CCDC17Q96LX7 622 aa27.81■■■□□ 2.04
U2AF1-202ENST00000380276 ZBTB40Q9NUA8 1239 aa27.81■■■□□ 2.04
U2AF1-202ENST00000380276 SLC4A4Q9Y6R1 1079 aa27.81■■■□□ 2.04
U2AF1-202ENST00000380276 SMIM22K7EJ46 135 aa27.8■■■□□ 2.04
U2AF1-202ENST00000380276 WDR46O15213 610 aaKnown RBP27.8■■■□□ 2.04
U2AF1-202ENST00000380276 CHGBP05060 677 aa27.8■■■□□ 2.04
U2AF1-202ENST00000380276 PRAMEF19Q5SWL8 479 aa27.8■■■□□ 2.04
U2AF1-202ENST00000380276 HAUS7Q99871 368 aa27.8■■■□□ 2.04
U2AF1-202ENST00000380276 PRDM5Q9NQX1 630 aaPredicted RBP27.8■■■□□ 2.04
U2AF1-202ENST00000380276 RLFQ13129 1914 aa27.8■■■□□ 2.04
U2AF1-202ENST00000380276 SEPT4O43236 478 aa27.79■■■□□ 2.04
U2AF1-202ENST00000380276 FCER1AP12319 257 aa27.79■■■□□ 2.04
U2AF1-202ENST00000380276 C12orf60Q5U649 245 aa27.79■■■□□ 2.04
U2AF1-202ENST00000380276 SIAH1Q8IUQ4 282 aa27.79■■■□□ 2.04
U2AF1-202ENST00000380276 CHMP4BQ9H444 224 aaKnown RBP27.79■■■□□ 2.04
U2AF1-202ENST00000380276 MTMR10Q9NXD2 777 aa27.79■■■□□ 2.04
U2AF1-202ENST00000380276 EEF2P13639 858 aaKnown RBP27.78■■■□□ 2.04
U2AF1-202ENST00000380276 MMP19Q99542 508 aa27.78■■■□□ 2.04
U2AF1-202ENST00000380276 STXBP5LQ9Y2K9 1186 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms