RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 RNF181Q9P0P0 153 aa8.98□□□□□ -0.97
CDKL5-202ENST00000379996 DYNC1I1O14576 645 aa8.98□□□□□ -0.97
CDKL5-202ENST00000379996 CLK2P49760 499 aaKnown RBP8.98□□□□□ -0.97
CDKL5-202ENST00000379996 GMPSP49915 693 aaPredicted RBP8.98□□□□□ -0.97
CDKL5-202ENST00000379996 TYRO3Q06418 890 aa8.98□□□□□ -0.97
CDKL5-202ENST00000379996 GPR162Q16538 588 aa8.98□□□□□ -0.97
CDKL5-202ENST00000379996 IMMTQ16891 758 aaKnown RBP8.98□□□□□ -0.97
CDKL5-202ENST00000379996 FAM200AQ8TCP9 573 aa8.98□□□□□ -0.97
CDKL5-202ENST00000379996 CALR3Q96L12 384 aaKnown RBP8.98□□□□□ -0.97
CDKL5-202ENST00000379996 NBPF3Q9H094 633 aa8.98□□□□□ -0.97
CDKL5-202ENST00000379996 PDCL3Q9H2J4 239 aa8.98□□□□□ -0.97
CDKL5-202ENST00000379996 DHX36Q9H2U1 1008 aaKnown RBP8.98□□□□□ -0.97
CDKL5-202ENST00000379996 ORC4O43929 436 aa8.98□□□□□ -0.97
CDKL5-202ENST00000379996 NR1I2O75469 434 aa8.98□□□□□ -0.97
CDKL5-202ENST00000379996 AP1G2O75843 785 aa8.98□□□□□ -0.97
CDKL5-202ENST00000379996 IQCB1Q15051 598 aa8.98□□□□□ -0.97
CDKL5-202ENST00000379996 CTR9Q6PD62 1173 aa8.98□□□□□ -0.97
CDKL5-202ENST00000379996 KIAA0825Q8IV33 1275 aa8.98□□□□□ -0.97
CDKL5-202ENST00000379996 RGS22Q8NE09 1264 aa8.98□□□□□ -0.97
CDKL5-202ENST00000379996 SCAND2PQ9GZW5 306 aaPredicted RBP8.98□□□□□ -0.97
CDKL5-202ENST00000379996 PYCARDQ9ULZ3 195 aa8.98□□□□□ -0.97
CDKL5-202ENST00000379996 JAG2Q9Y219 1238 aa8.98□□□□□ -0.97
CDKL5-202ENST00000379996 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.98□□□□□ -0.97
CDKL5-202ENST00000379996 R3HCC1Q9Y3T6 440 aaKnown RBP8.98□□□□□ -0.97
CDKL5-202ENST00000379996 VPS37CA5D8V6 355 aaPredicted RBP8.97□□□□□ -0.97
CDKL5-202ENST00000379996 GLTPD2A6NH11 291 aa8.97□□□□□ -0.97
CDKL5-202ENST00000379996 C3orf80F5H4A9 247 aa8.97□□□□□ -0.97
CDKL5-202ENST00000379996 FDPSP14324 419 aaKnown RBP8.97□□□□□ -0.97
CDKL5-202ENST00000379996 NDUFV2P19404 249 aa8.97□□□□□ -0.97
CDKL5-202ENST00000379996 NOLC1Q14978 699 aaKnown RBP eCLIP8.97□□□□□ -0.97
CDKL5-202ENST00000379996 C12orf60Q5U649 245 aa8.97□□□□□ -0.97
CDKL5-202ENST00000379996 MIGA1Q8NAN2 632 aa8.97□□□□□ -0.97
CDKL5-202ENST00000379996 ZNF830Q96NB3 372 aaPredicted RBP8.97□□□□□ -0.97
CDKL5-202ENST00000379996 OSBPL5Q9H0X9 879 aaPredicted RBP8.97□□□□□ -0.97
CDKL5-202ENST00000379996 GOLPH3LQ9H4A5 285 aa8.97□□□□□ -0.97
CDKL5-202ENST00000379996 TTC12Q9H892 705 aaPredicted RBP8.97□□□□□ -0.97
CDKL5-202ENST00000379996 CNTNAP1P78357 1384 aa8.97□□□□□ -0.97
CDKL5-202ENST00000379996 NID2Q14112 1375 aa8.97□□□□□ -0.97
CDKL5-202ENST00000379996 UQCRHLA0A096LP55 91 aa8.97□□□□□ -0.97
CDKL5-202ENST00000379996 UQCRHP07919 91 aa8.97□□□□□ -0.97
CDKL5-202ENST00000379996 HMGN5P82970 282 aaKnown RBP8.97□□□□□ -0.97
CDKL5-202ENST00000379996 BRF1Q92994 677 aa8.97□□□□□ -0.97
CDKL5-202ENST00000379996 CNNM2Q9H8M5 875 aa8.97□□□□□ -0.97
CDKL5-202ENST00000379996 RCOR1Q9UKL0 485 aa8.97□□□□□ -0.97
CDKL5-202ENST00000379996 NUDT7P0C024 238 aa8.96□□□□□ -0.97
CDKL5-202ENST00000379996 GABPAQ06546 454 aa8.96□□□□□ -0.97
CDKL5-202ENST00000379996 DLGAP5Q15398 846 aa8.96□□□□□ -0.97
CDKL5-202ENST00000379996 USP50Q70EL3 339 aaPredicted RBP8.96□□□□□ -0.97
CDKL5-202ENST00000379996 TEX11Q8IYF3 940 aa8.96□□□□□ -0.97
CDKL5-202ENST00000379996 NAPBQ9H115 298 aa8.96□□□□□ -0.97
CDKL5-202ENST00000379996 RNF41Q9H4P4 317 aaPredicted RBP8.96□□□□□ -0.97
CDKL5-202ENST00000379996 CBX8Q9HC52 389 aa8.96□□□□□ -0.97
CDKL5-202ENST00000379996 ADARB2Q9NS39 739 aaKnown RBP8.96□□□□□ -0.97
CDKL5-202ENST00000379996 DDX19AQ9NUU7 478 aaKnown RBP8.96□□□□□ -0.97
CDKL5-202ENST00000379996 USP40Q9NVE5 1235 aa8.96□□□□□ -0.97
CDKL5-202ENST00000379996 ATAD5Q96QE3 1844 aa8.96□□□□□ -0.97
CDKL5-202ENST00000379996 PRKAB2O43741 272 aa8.96□□□□□ -0.98
CDKL5-202ENST00000379996 CCDC192P0DO97 292 aa8.96□□□□□ -0.98
CDKL5-202ENST00000379996 CDC25BP30305 580 aa8.96□□□□□ -0.98
CDKL5-202ENST00000379996 RFC5P40937 340 aa8.96□□□□□ -0.98
CDKL5-202ENST00000379996 NOVP48745 357 aa8.96□□□□□ -0.98
CDKL5-202ENST00000379996 PPARAQ07869 468 aa8.96□□□□□ -0.98
CDKL5-202ENST00000379996 SARM1Q6SZW1 724 aa8.96□□□□□ -0.98
CDKL5-202ENST00000379996 DHX32Q7L7V1 743 aaKnown RBP8.96□□□□□ -0.98
CDKL5-202ENST00000379996 FERMT3Q86UX7 667 aa8.96□□□□□ -0.98
CDKL5-202ENST00000379996 NKX2-3Q8TAU0 364 aa8.96□□□□□ -0.98
CDKL5-202ENST00000379996 FBXW7Q969H0 707 aa8.96□□□□□ -0.98
CDKL5-202ENST00000379996 DACT1Q9NYF0 836 aa8.96□□□□□ -0.98
CDKL5-202ENST00000379996 ZNF70Q9UC06 446 aaPredicted RBP8.96□□□□□ -0.98
CDKL5-202ENST00000379996 FAM198AQ9UFP1 575 aa8.96□□□□□ -0.98
CDKL5-202ENST00000379996 SWAP70Q9UH65 585 aa8.96□□□□□ -0.98
CDKL5-202ENST00000379996 CNOT7Q9UIV1 285 aaKnown RBP8.96□□□□□ -0.98
CDKL5-202ENST00000379996 E7EWF7 191 aa8.96□□□□□ -0.98
CDKL5-202ENST00000379996 WNT10BO00744 389 aa8.96□□□□□ -0.98
CDKL5-202ENST00000379996 ZNF213O14771 459 aa8.96□□□□□ -0.98
CDKL5-202ENST00000379996 HSP90AA2PQ14568 343 aaPredicted RBP8.96□□□□□ -0.98
CDKL5-202ENST00000379996 MAP3K11Q16584 847 aa8.96□□□□□ -0.98
CDKL5-202ENST00000379996 C16orf86Q6ZW13 317 aa8.96□□□□□ -0.98
CDKL5-202ENST00000379996 C17orf53Q8N3J3 647 aaPredicted RBP8.96□□□□□ -0.98
CDKL5-202ENST00000379996 ZNF454Q8N9F8 522 aa8.96□□□□□ -0.98
CDKL5-202ENST00000379996 FAM151AQ8WW52 585 aa8.96□□□□□ -0.98
CDKL5-202ENST00000379996 PRMT6Q96LA8 375 aaPredicted RBP8.96□□□□□ -0.98
CDKL5-202ENST00000379996 NUP62CLQ9H1M0 184 aa8.96□□□□□ -0.98
CDKL5-202ENST00000379996 ZSCAN16Q9H4T2 348 aaPredicted RBP8.96□□□□□ -0.98
CDKL5-202ENST00000379996 TCP11L1Q9NUJ3 509 aa8.96□□□□□ -0.98
CDKL5-202ENST00000379996 HPS5Q9UPZ3 1129 aa8.96□□□□□ -0.98
CDKL5-202ENST00000379996 DOCK1Q14185 1865 aa8.95□□□□□ -0.98
CDKL5-202ENST00000379996 H7C1D1 291 aa8.95□□□□□ -0.98
CDKL5-202ENST00000379996 ZNF274Q96GC6 653 aaPredicted RBP8.95□□□□□ -0.98
CDKL5-202ENST00000379996 PRIMPOLQ96LW4 560 aa8.95□□□□□ -0.98
CDKL5-202ENST00000379996 FAM217BQ9NTX9 383 aaPredicted RBP8.95□□□□□ -0.98
CDKL5-202ENST00000379996 MYO1BO43795 1136 aa8.95□□□□□ -0.98
CDKL5-202ENST00000379996 SLC3A2P08195 630 aaKnown RBP8.95□□□□□ -0.98
CDKL5-202ENST00000379996 KIF4BQ2VIQ3 1234 aa8.95□□□□□ -0.98
CDKL5-202ENST00000379996 SH3D19Q5HYK7 790 aa8.95□□□□□ -0.98
CDKL5-202ENST00000379996 AKNAD1Q5T1N1 836 aa8.95□□□□□ -0.98
CDKL5-202ENST00000379996 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.95□□□□□ -0.98
CDKL5-202ENST00000379996 APOBEC3FQ8IUX4 373 aaKnown RBP8.95□□□□□ -0.98
CDKL5-202ENST00000379996 MB21D2Q8IYB1 491 aaPredicted RBP8.95□□□□□ -0.98
CDKL5-202ENST00000379996 KRT23Q9C075 422 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms