RNA–Protein interactions for RNA: ENST00000379663.7

EXOSC9-202, Transcript of exosome component 9, humanhuman

TSL 1 (best) BASIC

Gene EXOSC9, Length 1,529 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-202ENST00000379663 FMNL1O95466 1100 aaPredicted RBP13.96□□□□□ -0.17
EXOSC9-202ENST00000379663 SNHG28P0DPA3 235 aa13.96□□□□□ -0.17
EXOSC9-202ENST00000379663 JAG1P78504 1218 aa13.96□□□□□ -0.17
EXOSC9-202ENST00000379663 GRM4Q14833 912 aa13.96□□□□□ -0.17
EXOSC9-202ENST00000379663 ABCB5Q2M3G0 1257 aa13.96□□□□□ -0.17
EXOSC9-202ENST00000379663 CLEC17AQ6ZS10 378 aa13.96□□□□□ -0.17
EXOSC9-202ENST00000379663 TMTC3Q6ZXV5 915 aa13.96□□□□□ -0.17
EXOSC9-202ENST00000379663 CLEC10AQ8IUN9 316 aa13.96□□□□□ -0.17
EXOSC9-202ENST00000379663 MKL1Q969V6 931 aa13.96□□□□□ -0.17
EXOSC9-202ENST00000379663 DDX11Q96FC9 970 aa13.96□□□□□ -0.17
EXOSC9-202ENST00000379663 KANSL2Q9H9L4 492 aa13.96□□□□□ -0.17
EXOSC9-202ENST00000379663 SCAF8Q9UPN6 1271 aaKnown RBP13.96□□□□□ -0.17
EXOSC9-202ENST00000379663 MTMR6Q9Y217 621 aa13.96□□□□□ -0.17
EXOSC9-202ENST00000379663 KIF3AQ9Y496 699 aa13.96□□□□□ -0.17
EXOSC9-202ENST00000379663 CNTNAP5Q8WYK1 1306 aa13.96□□□□□ -0.17
EXOSC9-202ENST00000379663 PHF20L1A8MW92 1017 aa13.95□□□□□ -0.18
EXOSC9-202ENST00000379663 MPHOSPH10O00566 681 aaKnown RBP13.95□□□□□ -0.18
EXOSC9-202ENST00000379663 GDF11O95390 407 aa13.95□□□□□ -0.18
EXOSC9-202ENST00000379663 LARP1BQ659C4 914 aaKnown RBP13.95□□□□□ -0.18
EXOSC9-202ENST00000379663 CTCFLQ8NI51 663 aaPredicted RBP13.95□□□□□ -0.18
EXOSC9-202ENST00000379663 RNF26Q9BY78 433 aaPredicted RBP13.95□□□□□ -0.18
EXOSC9-202ENST00000379663 NYAP2Q9P242 653 aa13.95□□□□□ -0.18
EXOSC9-202ENST00000379663 MAD2L2Q9UI95 211 aa13.95□□□□□ -0.18
EXOSC9-202ENST00000379663 SYNPO2Q9UMS6 1093 aa13.95□□□□□ -0.18
EXOSC9-202ENST00000379663 CLEC11AQ9Y240 323 aa13.95□□□□□ -0.18
EXOSC9-202ENST00000379663 PALM3A6NDB9 673 aaPredicted RBP13.95□□□□□ -0.18
EXOSC9-202ENST00000379663 PLEKHA8P1O95397 391 aa13.95□□□□□ -0.18
EXOSC9-202ENST00000379663 ZSCAN22P10073 491 aaPredicted RBP13.95□□□□□ -0.18
EXOSC9-202ENST00000379663 KIF5BP33176 963 aa13.95□□□□□ -0.18
EXOSC9-202ENST00000379663 SEPT2Q15019 361 aa13.95□□□□□ -0.18
EXOSC9-202ENST00000379663 USP50Q70EL3 339 aaPredicted RBP13.95□□□□□ -0.18
EXOSC9-202ENST00000379663 SIAH1Q8IUQ4 282 aa13.95□□□□□ -0.18
EXOSC9-202ENST00000379663 FAM184AQ8NB25 1140 aa13.95□□□□□ -0.18
EXOSC9-202ENST00000379663 PHKBQ93100 1093 aa13.95□□□□□ -0.18
EXOSC9-202ENST00000379663 ORC3Q9UBD5 711 aaPredicted RBP13.95□□□□□ -0.18
EXOSC9-202ENST00000379663 ZBTB21Q9ULJ3 1066 aa13.95□□□□□ -0.18
EXOSC9-202ENST00000379663 POTECB2RU33 542 aa13.94□□□□□ -0.18
EXOSC9-202ENST00000379663 GH2P01242 217 aa13.94□□□□□ -0.18
EXOSC9-202ENST00000379663 PDHBP11177 359 aa13.94□□□□□ -0.18
EXOSC9-202ENST00000379663 EPHX2P34913 555 aa13.94□□□□□ -0.18
EXOSC9-202ENST00000379663 CAP2P40123 477 aa13.94□□□□□ -0.18
EXOSC9-202ENST00000379663 ICA1Q05084 483 aa13.94□□□□□ -0.18
EXOSC9-202ENST00000379663 NBPF12Q5TAG4 269 aaPredicted RBP13.94□□□□□ -0.18
EXOSC9-202ENST00000379663 CDC37L1Q7L3B6 337 aa13.94□□□□□ -0.18
EXOSC9-202ENST00000379663 MIGA2Q7L4E1 593 aa13.94□□□□□ -0.18
EXOSC9-202ENST00000379663 PPFIA3O75145 1194 aa13.93□□□□□ -0.18
EXOSC9-202ENST00000379663 F13A1P00488 732 aa13.93□□□□□ -0.18
EXOSC9-202ENST00000379663 EEF2P13639 858 aaKnown RBP13.93□□□□□ -0.18
EXOSC9-202ENST00000379663 RASGRP2Q7LDG7 609 aa13.93□□□□□ -0.18
EXOSC9-202ENST00000379663 LRRC47Q8N1G4 583 aaKnown RBP13.93□□□□□ -0.18
EXOSC9-202ENST00000379663 STAG2Q8N3U4 1231 aa13.93□□□□□ -0.18
EXOSC9-202ENST00000379663 SRBD1Q8N5C6 995 aaKnown RBP13.93□□□□□ -0.18
EXOSC9-202ENST00000379663 ZC3H15Q8WU90 426 aaKnown RBP13.93□□□□□ -0.18
EXOSC9-202ENST00000379663 HOOK2Q96ED9 719 aa13.93□□□□□ -0.18
EXOSC9-202ENST00000379663 CABP5Q9NP86 173 aa13.93□□□□□ -0.18
EXOSC9-202ENST00000379663 CLIP2Q9UDT6 1046 aa13.93□□□□□ -0.18
EXOSC9-202ENST00000379663 RLFQ13129 1914 aa13.93□□□□□ -0.18
EXOSC9-202ENST00000379663 TRPM7Q96QT4 1865 aa13.92□□□□□ -0.18
EXOSC9-202ENST00000379663 IQCA1LA6NCM1 817 aa13.92□□□□□ -0.18
EXOSC9-202ENST00000379663 PRPF3O43395 683 aaKnown RBP13.92□□□□□ -0.18
EXOSC9-202ENST00000379663 DEXIO95424 95 aa13.92□□□□□ -0.18
EXOSC9-202ENST00000379663 SMARCA1P28370 1054 aa13.92□□□□□ -0.18
EXOSC9-202ENST00000379663 SSRP1Q08945 709 aaKnown RBP13.92□□□□□ -0.18
EXOSC9-202ENST00000379663 SLC35G1Q2M3R5 365 aa13.92□□□□□ -0.18
EXOSC9-202ENST00000379663 DCAF15Q66K64 600 aa13.92□□□□□ -0.18
EXOSC9-202ENST00000379663 TRIM22Q8IYM9 498 aa13.92□□□□□ -0.18
EXOSC9-202ENST00000379663 CMTR1Q8N1G2 835 aaKnown RBP13.92□□□□□ -0.18
EXOSC9-202ENST00000379663 GMCL1P1Q8NEA9 526 aa13.92□□□□□ -0.18
EXOSC9-202ENST00000379663 SLC26A6Q9BXS9 759 aa13.92□□□□□ -0.18
EXOSC9-202ENST00000379663 GINM1Q9NU53 330 aa13.92□□□□□ -0.18
EXOSC9-202ENST00000379663 ZNF112Q9UJU3 913 aa13.92□□□□□ -0.18
EXOSC9-202ENST00000379663 LOC285556D6RIA3 1793 aa13.91□□□□□ -0.18
EXOSC9-202ENST00000379663 VPS37CA5D8V6 355 aaPredicted RBP13.91□□□□□ -0.18
EXOSC9-202ENST00000379663 UBE2Q2LH0YL09 131 aa13.91□□□□□ -0.18
EXOSC9-202ENST00000379663 ASNSP08243 561 aa13.91□□□□□ -0.18
EXOSC9-202ENST00000379663 PARP1P09874 1014 aaKnown RBP13.91□□□□□ -0.18
EXOSC9-202ENST00000379663 GNAQP50148 359 aa13.91□□□□□ -0.18
EXOSC9-202ENST00000379663 PKN1Q16512 942 aa13.91□□□□□ -0.18
EXOSC9-202ENST00000379663 ASPRV1Q53RT3 343 aa13.91□□□□□ -0.18
EXOSC9-202ENST00000379663 FBXO18Q8NFZ0 1043 aa13.91□□□□□ -0.18
EXOSC9-202ENST00000379663 WASF1Q92558 559 aa13.91□□□□□ -0.18
EXOSC9-202ENST00000379663 LZTS2Q9BRK4 669 aa13.91□□□□□ -0.18
EXOSC9-202ENST00000379663 SPZ1Q9BXG8 430 aa13.91□□□□□ -0.18
EXOSC9-202ENST00000379663 TAF1DQ9H5J8 278 aaPredicted RBP13.91□□□□□ -0.18
EXOSC9-202ENST00000379663 SMCHD1A6NHR9 2005 aa13.91□□□□□ -0.18
EXOSC9-202ENST00000379663 USP17L5A8MUK1 530 aa13.9□□□□□ -0.18
EXOSC9-202ENST00000379663 CYTH3O43739 400 aa13.9□□□□□ -0.18
EXOSC9-202ENST00000379663 CTNND1O60716 968 aaKnown RBP13.9□□□□□ -0.18
EXOSC9-202ENST00000379663 ZNF543Q08ER8 600 aa13.9□□□□□ -0.18
EXOSC9-202ENST00000379663 USP17L2Q6R6M4 530 aa13.9□□□□□ -0.18
EXOSC9-202ENST00000379663 DCPSQ96C86 337 aaKnown RBP13.9□□□□□ -0.18
EXOSC9-202ENST00000379663 C8orf76Q96K31 380 aa13.9□□□□□ -0.18
EXOSC9-202ENST00000379663 AIFM3Q96NN9 605 aa13.9□□□□□ -0.18
EXOSC9-202ENST00000379663 ALG1Q9BT22 464 aa13.9□□□□□ -0.18
EXOSC9-202ENST00000379663 ZNF341Q9BYN7 854 aa13.9□□□□□ -0.18
EXOSC9-202ENST00000379663 RBM27Q9P2N5 1060 aaKnown RBP13.9□□□□□ -0.18
EXOSC9-202ENST00000379663 RBBP6Q7Z6E9 1792 aaKnown RBP13.9□□□□□ -0.18
EXOSC9-202ENST00000379663 COL11A1P12107 1806 aaPredicted RBP13.9□□□□□ -0.18
EXOSC9-202ENST00000379663 A0A1W2PRG0 241 aa13.9□□□□□ -0.19
EXOSC9-202ENST00000379663 KLRF2D3W0D1 207 aa13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms