RNA–Protein interactions for RNA: ENST00000378513.7

RER1-203, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-203ENST00000378513 TSPY2A6NKD2 308 aa17.49■□□□□ 0.39
RER1-203ENST00000378513 CASP14P31944 242 aa17.49■□□□□ 0.39
RER1-203ENST00000378513 STAG2Q8N3U4 1231 aa17.49■□□□□ 0.39
RER1-203ENST00000378513 KCND1Q9NSA2 647 aa17.49■□□□□ 0.39
RER1-203ENST00000378513 XBP1P17861 261 aa17.49■□□□□ 0.39
RER1-203ENST00000378513 IRX5P78411 483 aaPredicted RBP17.49■□□□□ 0.39
RER1-203ENST00000378513 PARP10Q53GL7 1025 aa17.49■□□□□ 0.39
RER1-203ENST00000378513 RRAGBQ5VZM2 374 aa17.49■□□□□ 0.39
RER1-203ENST00000378513 ACRBPQ8NEB7 543 aa17.49■□□□□ 0.39
RER1-203ENST00000378513 ZCCHC17Q9NP64 241 aaKnown RBP17.49■□□□□ 0.39
RER1-203ENST00000378513 TAB2Q9NYJ8 693 aa17.49■□□□□ 0.39
RER1-203ENST00000378513 TFR2Q9UP52 801 aa17.49■□□□□ 0.39
RER1-203ENST00000378513 CEP131Q9UPN4 1083 aa17.49■□□□□ 0.39
RER1-203ENST00000378513 GDAQ9Y2T3 454 aa17.49■□□□□ 0.39
RER1-203ENST00000378513 EP400Q96L91 3159 aa17.48■□□□□ 0.39
RER1-203ENST00000378513 NR1I3Q14994 352 aa17.48■□□□□ 0.39
RER1-203ENST00000378513 LINC00116Q8NCU8 138 aa17.48■□□□□ 0.39
RER1-203ENST00000378513 NEK11Q8NG66 645 aa17.48■□□□□ 0.39
RER1-203ENST00000378513 MTRQ99707 1265 aa17.48■□□□□ 0.39
RER1-203ENST00000378513 MCM9Q9NXL9 1143 aa17.48■□□□□ 0.39
RER1-203ENST00000378513 MYH14Q7Z406 1995 aaKnown RBP17.48■□□□□ 0.39
RER1-203ENST00000378513 DISP2A7MBM2 1401 aa17.48■□□□□ 0.39
RER1-203ENST00000378513 ZSCAN12O43309 604 aa17.48■□□□□ 0.39
RER1-203ENST00000378513 GOLGA8HP0CJ92 632 aa17.48■□□□□ 0.39
RER1-203ENST00000378513 FXR1P51114 621 aaKnown RBP eCLIP17.48■□□□□ 0.39
RER1-203ENST00000378513 RASSF8Q8NHQ8 419 aa17.48■□□□□ 0.39
RER1-203ENST00000378513 CTCFLQ8NI51 663 aaPredicted RBP17.48■□□□□ 0.39
RER1-203ENST00000378513 XDHP47989 1333 aa17.48■□□□□ 0.39
RER1-203ENST00000378513 H2AFXP16104 143 aaPredicted RBP17.47■□□□□ 0.39
RER1-203ENST00000378513 DIXDC1Q155Q3 683 aa17.47■□□□□ 0.39
RER1-203ENST00000378513 DCP1AQ9NPI6 582 aaPredicted RBP17.47■□□□□ 0.39
RER1-203ENST00000378513 USP17L3A6NCW0 530 aa17.47■□□□□ 0.39
RER1-203ENST00000378513 USP17L4A6NCW7 530 aa17.47■□□□□ 0.39
RER1-203ENST00000378513 TRIM49BA6NDI0 452 aa17.47■□□□□ 0.39
RER1-203ENST00000378513 TADA3O75528 432 aa17.47■□□□□ 0.39
RER1-203ENST00000378513 TMTC3Q6ZXV5 915 aa17.47■□□□□ 0.39
RER1-203ENST00000378513 USP17L1Q7RTZ2 530 aa17.47■□□□□ 0.39
RER1-203ENST00000378513 NSUN4Q96CB9 384 aaKnown RBP17.47■□□□□ 0.39
RER1-203ENST00000378513 FHOD1Q9Y613 1164 aa17.47■□□□□ 0.39
RER1-203ENST00000378513 CHD4Q14839 1912 aa17.47■□□□□ 0.39
RER1-203ENST00000378513 FAM205AQ6ZU69 1335 aa17.47■□□□□ 0.39
RER1-203ENST00000378513 ABCA3Q99758 1704 aa17.47■□□□□ 0.39
RER1-203ENST00000378513 AKR1B15C9JRZ8 316 aaPredicted RBP17.47■□□□□ 0.39
RER1-203ENST00000378513 GRIK5Q16478 980 aa17.47■□□□□ 0.39
RER1-203ENST00000378513 NT5DC1Q5TFE4 455 aa17.47■□□□□ 0.39
RER1-203ENST00000378513 APTXQ7Z2E3 356 aaKnown RBP17.47■□□□□ 0.39
RER1-203ENST00000378513 PPFIBP1Q86W92 1011 aa17.47■□□□□ 0.39
RER1-203ENST00000378513 RTL9Q8NET4 1388 aa17.47■□□□□ 0.39
RER1-203ENST00000378513 PPP1R3GB7ZBB8 358 aa17.46■□□□□ 0.39
RER1-203ENST00000378513 PRPF3O43395 683 aaKnown RBP17.46■□□□□ 0.39
RER1-203ENST00000378513 DHX8Q14562 1220 aaKnown RBP17.46■□□□□ 0.39
RER1-203ENST00000378513 FAM98CQ17RN3 349 aaKnown RBP17.46■□□□□ 0.39
RER1-203ENST00000378513 AMIGO3Q86WK7 504 aa17.46■□□□□ 0.39
RER1-203ENST00000378513 SAP30BPQ9UHR5 308 aaKnown RBP17.46■□□□□ 0.39
RER1-203ENST00000378513 PHLPP2Q6ZVD8 1323 aa17.46■□□□□ 0.39
RER1-203ENST00000378513 CNTNAP5Q8WYK1 1306 aa17.46■□□□□ 0.39
RER1-203ENST00000378513 PNMA6AP0CW24 399 aaPredicted RBP17.46■□□□□ 0.39
RER1-203ENST00000378513 GYS2P54840 703 aa17.46■□□□□ 0.39
RER1-203ENST00000378513 PPP2R3AQ06190 1150 aa17.46■□□□□ 0.39
RER1-203ENST00000378513 TYW1BQ6NUM6 668 aa17.46■□□□□ 0.39
RER1-203ENST00000378513 DACH1Q9UI36 760 aa17.46■□□□□ 0.39
RER1-203ENST00000378513 CICQ96RK0 1608 aaPredicted RBP17.45■□□□□ 0.38
RER1-203ENST00000378513 N4BP3O15049 544 aa17.45■□□□□ 0.38
RER1-203ENST00000378513 ERCC3P19447 782 aa17.45■□□□□ 0.38
RER1-203ENST00000378513 ZNF579Q8NAF0 562 aaKnown RBP17.45■□□□□ 0.38
RER1-203ENST00000378513 RNF216Q9NWF9 866 aaPredicted RBP17.45■□□□□ 0.38
RER1-203ENST00000378513 ZNF804BA4D1E1 1349 aa17.45■□□□□ 0.38
RER1-203ENST00000378513 A0A1B0GTH6 734 aa17.45■□□□□ 0.38
RER1-203ENST00000378513 STX10O60499 249 aa17.45■□□□□ 0.38
RER1-203ENST00000378513 TFAP4Q01664 338 aa17.45■□□□□ 0.38
RER1-203ENST00000378513 SPATA1Q5VX52 437 aa17.45■□□□□ 0.38
RER1-203ENST00000378513 BRMS1Q9HCU9 246 aa17.45■□□□□ 0.38
RER1-203ENST00000378513 ZNF569Q5MCW4 686 aa17.44■□□□□ 0.38
RER1-203ENST00000378513 TMCO3Q6UWJ1 677 aa17.44■□□□□ 0.38
RER1-203ENST00000378513 STX8Q9UNK0 236 aa17.44■□□□□ 0.38
RER1-203ENST00000378513 SASH3O75995 380 aa17.44■□□□□ 0.38
RER1-203ENST00000378513 SCG2P13521 617 aa17.44■□□□□ 0.38
RER1-203ENST00000378513 PLA2G4AP47712 749 aa17.44■□□□□ 0.38
RER1-203ENST00000378513 TAF3Q5VWG9 929 aa17.44■□□□□ 0.38
RER1-203ENST00000378513 SPATA20Q8TB22 786 aa17.44■□□□□ 0.38
RER1-203ENST00000378513 AK7Q96M32 723 aa17.44■□□□□ 0.38
RER1-203ENST00000378513 UIMC1Q96RL1 719 aa17.44■□□□□ 0.38
RER1-203ENST00000378513 BSDC1Q9NW68 430 aaPredicted RBP17.44■□□□□ 0.38
RER1-203ENST00000378513 TRIM10Q9UDY6 481 aa17.44■□□□□ 0.38
RER1-203ENST00000378513 ADD3Q9UEY8 706 aaKnown RBP17.44■□□□□ 0.38
RER1-203ENST00000378513 MYH13Q9UKX3 1938 aa17.43■□□□□ 0.38
RER1-203ENST00000378513 GYPCP04921 128 aa17.43■□□□□ 0.38
RER1-203ENST00000378513 HIBADHP31937 336 aaKnown RBP17.43■□□□□ 0.38
RER1-203ENST00000378513 KCNJ6P48051 423 aa17.43■□□□□ 0.38
RER1-203ENST00000378513 RPS8P62241 208 aaKnown RBP17.43■□□□□ 0.38
RER1-203ENST00000378513 KRT31Q15323 416 aa17.43■□□□□ 0.38
RER1-203ENST00000378513 TNFRSF25Q93038 417 aa17.43■□□□□ 0.38
RER1-203ENST00000378513 KIFC2Q96AC6 838 aa17.43■□□□□ 0.38
RER1-203ENST00000378513 ANKRD36CQ5JPF3 1778 aa17.43■□□□□ 0.38
RER1-203ENST00000378513 CCP110O43303 1012 aa17.43■□□□□ 0.38
RER1-203ENST00000378513 UBE4AQ14139 1066 aa17.43■□□□□ 0.38
RER1-203ENST00000378513 KANK3Q6NY19 840 aa17.43■□□□□ 0.38
RER1-203ENST00000378513 NBPF5PQ86XG9 351 aaPredicted RBP17.43■□□□□ 0.38
RER1-203ENST00000378513 VAT1LQ9HCJ6 419 aa17.43■□□□□ 0.38
RER1-203ENST00000378513 ANAPC4Q9UJX5 808 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms