RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 ALX1Q15699 326 aa20.3■□□□□ 0.84
RER1-202ENST00000378512 MCMDC2Q4G0Z9 681 aa20.3■□□□□ 0.84
RER1-202ENST00000378512 DEFB118Q96PH6 123 aa20.3■□□□□ 0.84
RER1-202ENST00000378512 TMX2Q9Y320 296 aa20.3■□□□□ 0.84
RER1-202ENST00000378512 MINDY4BA8MYZ0 360 aa20.29■□□□□ 0.84
RER1-202ENST00000378512 TRIM6-TRIM34B2RNG4 842 aa20.29■□□□□ 0.84
RER1-202ENST00000378512 APPP05067 770 aa20.29■□□□□ 0.84
RER1-202ENST00000378512 Q3C1V9 767 aa20.29■□□□□ 0.84
RER1-202ENST00000378512 LBX2Q6XYB7 198 aa20.29■□□□□ 0.84
RER1-202ENST00000378512 CATSPERGQ6ZRH7 1159 aa20.29■□□□□ 0.84
RER1-202ENST00000378512 FEZ1Q99689 392 aa20.29■□□□□ 0.84
RER1-202ENST00000378512 RBPJLQ9UBG7 517 aa20.29■□□□□ 0.84
RER1-202ENST00000378512 COLQQ9Y215 455 aaPredicted RBP20.29■□□□□ 0.84
RER1-202ENST00000378512 ZMYM6O95789 1325 aa20.28■□□□□ 0.84
RER1-202ENST00000378512 USP17L15C9J2P7 530 aa20.28■□□□□ 0.84
RER1-202ENST00000378512 USP17L13C9JLJ4 530 aa20.28■□□□□ 0.84
RER1-202ENST00000378512 USP17L11C9JVI0 530 aa20.28■□□□□ 0.84
RER1-202ENST00000378512 USP17L18D6R9N7 530 aa20.28■□□□□ 0.84
RER1-202ENST00000378512 USP17L22D6RA61 530 aa20.28■□□□□ 0.84
RER1-202ENST00000378512 USP17L17D6RBQ6 530 aa20.28■□□□□ 0.84
RER1-202ENST00000378512 USP17L19D6RCP7 530 aa20.28■□□□□ 0.84
RER1-202ENST00000378512 USP17L20D6RJB6 530 aa20.28■□□□□ 0.84
RER1-202ENST00000378512 SGPL1O95470 568 aa20.28■□□□□ 0.84
RER1-202ENST00000378512 SDSP20132 328 aa20.28■□□□□ 0.84
RER1-202ENST00000378512 ICA1Q05084 483 aa20.28■□□□□ 0.84
RER1-202ENST00000378512 USP17L24Q0WX57 530 aa20.28■□□□□ 0.84
RER1-202ENST00000378512 NMIQ13287 307 aaPredicted RBP20.28■□□□□ 0.84
RER1-202ENST00000378512 VPS53Q5VIR6 699 aa20.28■□□□□ 0.84
RER1-202ENST00000378512 NKX2-3Q8TAU0 364 aa20.28■□□□□ 0.84
RER1-202ENST00000378512 NAPBQ9H115 298 aa20.28■□□□□ 0.84
RER1-202ENST00000378512 KANSL2Q9H9L4 492 aa20.28■□□□□ 0.84
RER1-202ENST00000378512 PLIN4Q96Q06 1357 aa20.28■□□□□ 0.84
RER1-202ENST00000378512 IGKV6D-41A0A0C4DH26 115 aa20.27■□□□□ 0.84
RER1-202ENST00000378512 KIAA1755Q5JYT7 1200 aa20.27■□□□□ 0.84
RER1-202ENST00000378512 ZNF589Q86UQ0 364 aaPredicted RBP20.27■□□□□ 0.84
RER1-202ENST00000378512 CLEC10AQ8IUN9 316 aa20.27■□□□□ 0.84
RER1-202ENST00000378512 GTF3C2Q8WUA4 911 aaPredicted RBP20.27■□□□□ 0.84
RER1-202ENST00000378512 RILPL2Q969X0 211 aa20.27■□□□□ 0.84
RER1-202ENST00000378512 PAGR1Q9BTK6 254 aa20.27■□□□□ 0.84
RER1-202ENST00000378512 PORCNQ9H237 461 aa20.27■□□□□ 0.84
RER1-202ENST00000378512 PAK6Q9NQU5 681 aaPredicted RBP20.27■□□□□ 0.84
RER1-202ENST00000378512 ANAPC4Q9UJX5 808 aa20.27■□□□□ 0.84
RER1-202ENST00000378512 LAMA4Q16363 1823 aa20.27■□□□□ 0.84
RER1-202ENST00000378512 FARP2O94887 1054 aaPredicted RBP20.27■□□□□ 0.83
RER1-202ENST00000378512 PPARAQ07869 468 aa20.27■□□□□ 0.83
RER1-202ENST00000378512 LPAR1Q92633 364 aa20.27■□□□□ 0.83
RER1-202ENST00000378512 DPF3Q92784 378 aa20.27■□□□□ 0.83
RER1-202ENST00000378512 VCPKMTQ9H867 229 aa20.27■□□□□ 0.83
RER1-202ENST00000378512 ZNF287Q9HBT7 754 aa20.27■□□□□ 0.83
RER1-202ENST00000378512 ARHGEF10LQ9HCE6 1279 aa20.27■□□□□ 0.83
RER1-202ENST00000378512 CEP290O15078 2479 aa20.26■□□□□ 0.83
RER1-202ENST00000378512 FGRP09769 529 aa20.26■□□□□ 0.83
RER1-202ENST00000378512 EEF2P13639 858 aaKnown RBP20.26■□□□□ 0.83
RER1-202ENST00000378512 GSPT1P15170 499 aaKnown RBP20.26■□□□□ 0.83
RER1-202ENST00000378512 CYP2B6P20813 491 aa20.26■□□□□ 0.83
RER1-202ENST00000378512 GPRC5AQ8NFJ5 357 aa20.26■□□□□ 0.83
RER1-202ENST00000378512 TRIB2Q92519 343 aa20.26■□□□□ 0.83
RER1-202ENST00000378512 SH2D4AQ9H788 454 aa20.26■□□□□ 0.83
RER1-202ENST00000378512 MKNK2Q9HBH9 465 aa20.26■□□□□ 0.83
RER1-202ENST00000378512 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.26■□□□□ 0.835e-6■■■□□ 15.8
RER1-202ENST00000378512 CCDC171Q6TFL3 1326 aa20.25■□□□□ 0.83
RER1-202ENST00000378512 CNMDO75829 334 aa20.25■□□□□ 0.83
RER1-202ENST00000378512 TFRCP02786 760 aaKnown RBP20.25■□□□□ 0.83
RER1-202ENST00000378512 HSPD1P10809 573 aaKnown RBP20.25■□□□□ 0.83
RER1-202ENST00000378512 ERVK-9P63128 1117 aa20.25■□□□□ 0.83
RER1-202ENST00000378512 ERVK-24P63145 666 aa20.25■□□□□ 0.83
RER1-202ENST00000378512 TTC22Q5TAA0 569 aa20.25■□□□□ 0.83
RER1-202ENST00000378512 DIS3LQ8TF46 1054 aaKnown RBP20.25■□□□□ 0.83
RER1-202ENST00000378512 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.25■□□□□ 0.833e-15■■□□□ 14.4
RER1-202ENST00000378512 RPAP3Q9H6T3 665 aaPredicted RBP20.25■□□□□ 0.83
RER1-202ENST00000378512 NYAP2Q9P242 653 aa20.25■□□□□ 0.83
RER1-202ENST00000378512 FGAP02671 866 aa20.24■□□□□ 0.83
RER1-202ENST00000378512 HMGCRP04035 888 aa20.24■□□□□ 0.83
RER1-202ENST00000378512 PDE4BQ07343 736 aa20.24■□□□□ 0.83
RER1-202ENST00000378512 CRISPLD2Q9H0B8 497 aa20.24■□□□□ 0.83
RER1-202ENST00000378512 RABGAP1Q9Y3P9 1069 aa20.24■□□□□ 0.83
RER1-202ENST00000378512 COL11A1P12107 1806 aaPredicted RBP20.23■□□□□ 0.83
RER1-202ENST00000378512 SPDYE16A6NNV3 312 aaPredicted RBP20.23■□□□□ 0.83
RER1-202ENST00000378512 HIP1O00291 1037 aa20.23■□□□□ 0.83
RER1-202ENST00000378512 MKL1Q969V6 931 aa20.23■□□□□ 0.83
RER1-202ENST00000378512 TACC3Q9Y6A5 838 aa20.23■□□□□ 0.83
RER1-202ENST00000378512 WDR46O15213 610 aaKnown RBP20.22■□□□□ 0.83
RER1-202ENST00000378512 PRDM1O75626 825 aa20.22■□□□□ 0.83
RER1-202ENST00000378512 SLC3A2P08195 630 aaKnown RBP20.22■□□□□ 0.83
RER1-202ENST00000378512 CCL14Q16627 93 aa20.22■□□□□ 0.83
RER1-202ENST00000378512 CHRDL2Q6WN34 429 aa20.22■□□□□ 0.83
RER1-202ENST00000378512 ZNF444Q8N0Y2 327 aaPredicted RBP20.22■□□□□ 0.83
RER1-202ENST00000378512 STK11IPQ8N1F8 1099 aa20.22■□□□□ 0.83
RER1-202ENST00000378512 NEDD1Q8NHV4 660 aa20.22■□□□□ 0.83
RER1-202ENST00000378512 SYNPO2Q9UMS6 1093 aa20.22■□□□□ 0.83
RER1-202ENST00000378512 FXR1P51114 621 aaKnown RBP eCLIP20.21■□□□□ 0.83
RER1-202ENST00000378512 MFAP1P55081 439 aaKnown RBP20.21■□□□□ 0.83
RER1-202ENST00000378512 COG2Q14746 738 aa20.21■□□□□ 0.83
RER1-202ENST00000378512 GPR142Q7Z601 462 aa20.21■□□□□ 0.83
RER1-202ENST00000378512 USP6NLQ92738 828 aa20.21■□□□□ 0.83
RER1-202ENST00000378512 PAWRQ96IZ0 340 aaKnown RBP20.21■□□□□ 0.83
RER1-202ENST00000378512 MTMR4Q9NYA4 1195 aa20.21■□□□□ 0.83
RER1-202ENST00000378512 BTBD7Q9P203 1132 aa20.21■□□□□ 0.83
RER1-202ENST00000378512 ORC4O43929 436 aa20.2■□□□□ 0.82
RER1-202ENST00000378512 CEP95Q96GE4 821 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms