RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 HOMER1Q86YM7 354 aa12.22□□□□□ -0.45
PCDHGA1-201ENST00000378105 NBPF15Q8N660 670 aa12.22□□□□□ -0.45
PCDHGA1-201ENST00000378105 ZKSCAN3Q9BRR0 538 aa12.22□□□□□ -0.45
PCDHGA1-201ENST00000378105 ARMT1Q9H993 441 aa12.22□□□□□ -0.45
PCDHGA1-201ENST00000378105 KLF18A0A0U1RQI7 1052 aa12.22□□□□□ -0.45
PCDHGA1-201ENST00000378105 PPP1R12BO60237 982 aaPredicted RBP12.22□□□□□ -0.45
PCDHGA1-201ENST00000378105 ABL2P42684 1182 aa12.22□□□□□ -0.45
PCDHGA1-201ENST00000378105 PDE4BQ07343 736 aa12.22□□□□□ -0.45
PCDHGA1-201ENST00000378105 KCNB1Q14721 858 aa12.22□□□□□ -0.45
PCDHGA1-201ENST00000378105 EPHA10Q5JZY3 1008 aa12.22□□□□□ -0.45
PCDHGA1-201ENST00000378105 SIRT2Q8IXJ6 389 aa12.22□□□□□ -0.45
PCDHGA1-201ENST00000378105 UPP2O95045 317 aa12.22□□□□□ -0.45
PCDHGA1-201ENST00000378105 ADORA1P30542 326 aa12.22□□□□□ -0.45
PCDHGA1-201ENST00000378105 LARGE2Q8N3Y3 721 aa12.22□□□□□ -0.45
PCDHGA1-201ENST00000378105 TBC1D5Q92609 795 aa12.22□□□□□ -0.45
PCDHGA1-201ENST00000378105 KRT85P78386 507 aa12.22□□□□□ -0.45
PCDHGA1-201ENST00000378105 TAX1BP1Q86VP1 789 aa12.22□□□□□ -0.45
PCDHGA1-201ENST00000378105 NLGN1Q8N2Q7 840 aa12.22□□□□□ -0.45
PCDHGA1-201ENST00000378105 SEC62Q99442 399 aaKnown RBP12.22□□□□□ -0.45
PCDHGA1-201ENST00000378105 YIPF3Q9GZM5 350 aa12.22□□□□□ -0.45
PCDHGA1-201ENST00000378105 SAP30BPQ9UHR5 308 aaKnown RBP12.22□□□□□ -0.45
PCDHGA1-201ENST00000378105 CIZ1Q9ULV3 898 aaPredicted RBP12.22□□□□□ -0.45
PCDHGA1-201ENST00000378105 MAPK8IP1Q9UQF2 711 aa12.22□□□□□ -0.45
PCDHGA1-201ENST00000378105 AK9Q5TCS8 1911 aa12.21□□□□□ -0.45
PCDHGA1-201ENST00000378105 ATP6V1G1O75348 118 aa12.21□□□□□ -0.45
PCDHGA1-201ENST00000378105 DOK7Q18PE1 504 aa12.21□□□□□ -0.45
PCDHGA1-201ENST00000378105 TFIP11Q9UBB9 837 aaKnown RBP12.21□□□□□ -0.45
PCDHGA1-201ENST00000378105 USP27XA6NNY8 438 aa12.21□□□□□ -0.46
PCDHGA1-201ENST00000378105 EPB41L2O43491 1005 aaKnown RBP12.21□□□□□ -0.46
PCDHGA1-201ENST00000378105 HLA-DOAP06340 250 aa12.21□□□□□ -0.46
PCDHGA1-201ENST00000378105 IVLP07476 585 aa12.21□□□□□ -0.46
PCDHGA1-201ENST00000378105 CNGA1P29973 690 aa12.21□□□□□ -0.46
PCDHGA1-201ENST00000378105 EN1Q05925 392 aaPredicted RBP12.21□□□□□ -0.46
PCDHGA1-201ENST00000378105 CCDC178Q5BJE1 867 aa12.21□□□□□ -0.46
PCDHGA1-201ENST00000378105 ZGPATQ8N5A5 531 aaKnown RBP12.21□□□□□ -0.46
PCDHGA1-201ENST00000378105 B4GALNT2Q8NHY0 566 aa12.21□□□□□ -0.46
PCDHGA1-201ENST00000378105 EYA3Q99504 573 aa12.21□□□□□ -0.46
PCDHGA1-201ENST00000378105 AATFQ9NY61 560 aaKnown RBP eCLIP12.21□□□□□ -0.46
PCDHGA1-201ENST00000378105 MMP10P09238 476 aa12.21□□□□□ -0.46
PCDHGA1-201ENST00000378105 CHRNDQ07001 517 aa12.21□□□□□ -0.46
PCDHGA1-201ENST00000378105 GRM1Q13255 1194 aa12.21□□□□□ -0.46
PCDHGA1-201ENST00000378105 PI16Q6UXB8 463 aa12.21□□□□□ -0.46
PCDHGA1-201ENST00000378105 CCAR2Q8N163 923 aaKnown RBP12.21□□□□□ -0.46
PCDHGA1-201ENST00000378105 C8orf76Q96K31 380 aa12.21□□□□□ -0.46
PCDHGA1-201ENST00000378105 SBF1O95248 1867 aa12.2□□□□□ -0.46
PCDHGA1-201ENST00000378105 MYL1P05976 194 aa12.2□□□□□ -0.46
PCDHGA1-201ENST00000378105 USP8P40818 1118 aa12.2□□□□□ -0.46
PCDHGA1-201ENST00000378105 GTF2IP78347 998 aa12.2□□□□□ -0.46
PCDHGA1-201ENST00000378105 LAMB3Q13751 1172 aa12.2□□□□□ -0.46
PCDHGA1-201ENST00000378105 C2CD5Q86YS7 1000 aa12.2□□□□□ -0.46
PCDHGA1-201ENST00000378105 TMX3Q96JJ7 454 aa12.2□□□□□ -0.46
PCDHGA1-201ENST00000378105 RANBP17Q9H2T7 1088 aaKnown RBP12.2□□□□□ -0.46
PCDHGA1-201ENST00000378105 SHTN1A0MZ66 631 aa12.2□□□□□ -0.46
PCDHGA1-201ENST00000378105 MYO1BO43795 1136 aa12.2□□□□□ -0.46
PCDHGA1-201ENST00000378105 CYP19A1P11511 503 aaPredicted RBP12.2□□□□□ -0.46
PCDHGA1-201ENST00000378105 DDIT3P35638 169 aa12.2□□□□□ -0.46
PCDHGA1-201ENST00000378105 GSTO1P78417 241 aa12.2□□□□□ -0.46
PCDHGA1-201ENST00000378105 MCM6Q14566 821 aa12.2□□□□□ -0.46
PCDHGA1-201ENST00000378105 CREB3L3Q68CJ9 461 aa12.2□□□□□ -0.46
PCDHGA1-201ENST00000378105 CATIPQ7Z7H3 387 aa12.2□□□□□ -0.46
PCDHGA1-201ENST00000378105 DNAI1Q9UI46 699 aa12.2□□□□□ -0.46
PCDHGA1-201ENST00000378105 GSPT1P15170 499 aaKnown RBP12.2□□□□□ -0.46
PCDHGA1-201ENST00000378105 PHKA1P46020 1223 aa12.2□□□□□ -0.46
PCDHGA1-201ENST00000378105 VPS72Q15906 364 aa12.2□□□□□ -0.46
PCDHGA1-201ENST00000378105 Q6ZUG5 572 aa12.2□□□□□ -0.46
PCDHGA1-201ENST00000378105 NCAPG2Q86XI2 1143 aa12.2□□□□□ -0.46
PCDHGA1-201ENST00000378105 CLEC11AQ9Y240 323 aa12.2□□□□□ -0.46
PCDHGA1-201ENST00000378105 CCDC171Q6TFL3 1326 aa12.19□□□□□ -0.46
PCDHGA1-201ENST00000378105 FER1L6Q2WGJ9 1857 aa12.19□□□□□ -0.46
PCDHGA1-201ENST00000378105 GPAA1O43292 621 aa12.19□□□□□ -0.46
PCDHGA1-201ENST00000378105 TSPY3P0CV98 308 aa12.19□□□□□ -0.46
PCDHGA1-201ENST00000378105 TSPY8P0CW00 308 aa12.19□□□□□ -0.46
PCDHGA1-201ENST00000378105 ERCC3P19447 782 aa12.19□□□□□ -0.46
PCDHGA1-201ENST00000378105 IGBP1P78318 339 aa12.19□□□□□ -0.46
PCDHGA1-201ENST00000378105 TRMT1LQ7Z2T5 733 aaKnown RBP12.19□□□□□ -0.46
PCDHGA1-201ENST00000378105 KBTBD3Q8NAB2 608 aa12.19□□□□□ -0.46
PCDHGA1-201ENST00000378105 SPATA32Q96LK8 384 aa12.19□□□□□ -0.46
PCDHGA1-201ENST00000378105 ORC3Q9UBD5 711 aaPredicted RBP12.19□□□□□ -0.46
PCDHGA1-201ENST00000378105 DBNLQ9UJU6 430 aaKnown RBP12.19□□□□□ -0.46
PCDHGA1-201ENST00000378105 DENND2AQ9ULE3 1009 aa12.19□□□□□ -0.46
PCDHGA1-201ENST00000378105 PEX14O75381 377 aa12.19□□□□□ -0.46
PCDHGA1-201ENST00000378105 TXNRD1Q16881 649 aa12.19□□□□□ -0.46
PCDHGA1-201ENST00000378105 KCTD17Q8N5Z5 321 aa12.19□□□□□ -0.46
PCDHGA1-201ENST00000378105 SPATA5Q8NB90 893 aa12.19□□□□□ -0.46
PCDHGA1-201ENST00000378105 NOC3LQ8WTT2 800 aaKnown RBP12.19□□□□□ -0.46
PCDHGA1-201ENST00000378105 FAM53CQ9NYF3 392 aa12.19□□□□□ -0.46
PCDHGA1-201ENST00000378105 GJB2P29033 226 aa12.19□□□□□ -0.46
PCDHGA1-201ENST00000378105 METAP2P50579 478 aaKnown RBP eCLIP12.19□□□□□ -0.46
PCDHGA1-201ENST00000378105 WTAPQ15007 396 aa12.19□□□□□ -0.46
PCDHGA1-201ENST00000378105 CCDC102BQ68D86 513 aa12.19□□□□□ -0.46
PCDHGA1-201ENST00000378105 SLC26A6Q9BXS9 759 aa12.19□□□□□ -0.46
PCDHGA1-201ENST00000378105 HDAC9Q9UKV0 1011 aa12.19□□□□□ -0.46
PCDHGA1-201ENST00000378105 SPATA31A6Q5VVP1 1343 aa12.18□□□□□ -0.46
PCDHGA1-201ENST00000378105 PXDNLA1KZ92 1463 aa12.18□□□□□ -0.46
PCDHGA1-201ENST00000378105 MYO1FO00160 1098 aa12.18□□□□□ -0.46
PCDHGA1-201ENST00000378105 EZH1Q92800 747 aaPredicted RBP12.18□□□□□ -0.46
PCDHGA1-201ENST00000378105 GPR101Q96P66 508 aaPredicted RBP12.18□□□□□ -0.46
PCDHGA1-201ENST00000378105 KAT14Q9H8E8 782 aa12.18□□□□□ -0.46
PCDHGA1-201ENST00000378105 SH2B1Q9NRF2 756 aaPredicted RBP12.18□□□□□ -0.46
PCDHGA1-201ENST00000378105 HMG20BQ9P0W2 317 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms