RNA–Protein interactions for RNA: ENST00000377612.8

COMMD6-202, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-202ENST00000377612 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.45■■□□□ 1.02
COMMD6-202ENST00000377612 RABGAP1Q9Y3P9 1069 aa21.45■■□□□ 1.02
COMMD6-202ENST00000377612 MAPK4P31152 587 aa21.44■■□□□ 1.02
COMMD6-202ENST00000377612 CCL14Q16627 93 aa21.44■■□□□ 1.02
COMMD6-202ENST00000377612 SBK1Q52WX2 424 aa21.44■■□□□ 1.02
COMMD6-202ENST00000377612 SOCS4Q8WXH5 440 aa21.44■■□□□ 1.02
COMMD6-202ENST00000377612 CRISPLD2Q9H0B8 497 aa21.44■■□□□ 1.02
COMMD6-202ENST00000377612 TMX2Q9Y320 296 aa21.44■■□□□ 1.02
COMMD6-202ENST00000377612 TRIOBPQ9H2D6 2365 aa21.43■■□□□ 1.02
COMMD6-202ENST00000377612 FARP2O94887 1054 aaPredicted RBP21.43■■□□□ 1.02
COMMD6-202ENST00000377612 MAP3K21Q5TCX8 1036 aa21.43■■□□□ 1.02
COMMD6-202ENST00000377612 PLEKHH3Q7Z736 793 aa21.43■■□□□ 1.02
COMMD6-202ENST00000377612 SPICE1Q8N0Z3 855 aa21.43■■□□□ 1.02
COMMD6-202ENST00000377612 STK11IPQ8N1F8 1099 aa21.43■■□□□ 1.02
COMMD6-202ENST00000377612 NUDT12Q9BQG2 462 aa21.43■■□□□ 1.02
COMMD6-202ENST00000377612 SMCHD1A6NHR9 2005 aa21.42■■□□□ 1.02
COMMD6-202ENST00000377612 GLRX3O76003 335 aaKnown RBP21.42■■□□□ 1.02
COMMD6-202ENST00000377612 ZFYP08048 801 aaPredicted RBP21.42■■□□□ 1.02
COMMD6-202ENST00000377612 RASA1P20936 1047 aa21.42■■□□□ 1.02
COMMD6-202ENST00000377612 HDAC1Q13547 482 aaPredicted RBP21.42■■□□□ 1.02
COMMD6-202ENST00000377612 DIS3LQ8TF46 1054 aaKnown RBP21.42■■□□□ 1.02
COMMD6-202ENST00000377612 DDRGK1Q96HY6 314 aa21.42■■□□□ 1.02
COMMD6-202ENST00000377612 CCDC17Q96LX7 622 aa21.42■■□□□ 1.02
COMMD6-202ENST00000377612 TANGO6Q9C0B7 1094 aa21.42■■□□□ 1.02
COMMD6-202ENST00000377612 VCPKMTQ9H867 229 aa21.42■■□□□ 1.02
COMMD6-202ENST00000377612 ARHGEF10LQ9HCE6 1279 aa21.42■■□□□ 1.02
COMMD6-202ENST00000377612 FOXP2O15409 715 aa21.41■■□□□ 1.02
COMMD6-202ENST00000377612 XRCC5P13010 732 aaKnown RBP21.41■■□□□ 1.02
COMMD6-202ENST00000377612 EEF2P13639 858 aaKnown RBP21.41■■□□□ 1.02
COMMD6-202ENST00000377612 GIMAP6Q6P9H5 292 aa21.41■■□□□ 1.02
COMMD6-202ENST00000377612 AMOTL1Q8IY63 956 aa21.41■■□□□ 1.02
COMMD6-202ENST00000377612 APBA2Q99767 749 aa21.41■■□□□ 1.02
COMMD6-202ENST00000377612 FSD1Q9BTV5 496 aa21.41■■□□□ 1.02
COMMD6-202ENST00000377612 ERC2O15083 957 aa21.4■■□□□ 1.02
COMMD6-202ENST00000377612 PRKAR2AP13861 404 aaKnown RBP21.4■■□□□ 1.02
COMMD6-202ENST00000377612 ZMYM1Q5SVZ6 1142 aa21.4■■□□□ 1.02
COMMD6-202ENST00000377612 FLRT1Q9NZU1 646 aa21.4■■□□□ 1.02
COMMD6-202ENST00000377612 LCTP09848 1927 aa21.39■■□□□ 1.02
COMMD6-202ENST00000377612 RPTORQ8N122 1335 aa21.39■■□□□ 1.01
COMMD6-202ENST00000377612 MINDY4BA8MYZ0 360 aa21.39■■□□□ 1.01
COMMD6-202ENST00000377612 H0YGN5 161 aa21.39■■□□□ 1.01
COMMD6-202ENST00000377612 ZKSCAN1P17029 563 aaPredicted RBP21.39■■□□□ 1.01
COMMD6-202ENST00000377612 RGS2P41220 211 aa21.39■■□□□ 1.01
COMMD6-202ENST00000377612 MNX1P50219 401 aaPredicted RBP21.39■■□□□ 1.01
COMMD6-202ENST00000377612 MAP2K5Q13163 448 aa21.39■■□□□ 1.01
COMMD6-202ENST00000377612 GRB14Q14449 540 aa21.39■■□□□ 1.01
COMMD6-202ENST00000377612 ANKRD45Q5TZF3 282 aa21.39■■□□□ 1.01
COMMD6-202ENST00000377612 LPAR1Q92633 364 aa21.39■■□□□ 1.01
COMMD6-202ENST00000377612 ATG4CQ96DT6 458 aa21.39■■□□□ 1.01
COMMD6-202ENST00000377612 MOV10L1Q9BXT6 1211 aaKnown RBP21.39■■□□□ 1.01
COMMD6-202ENST00000377612 RANBP2P49792 3224 aaKnown RBP21.38■■□□□ 1.01
COMMD6-202ENST00000377612 PTPREP23469 700 aa21.38■■□□□ 1.01
COMMD6-202ENST00000377612 DSG3P32926 999 aa21.38■■□□□ 1.01
COMMD6-202ENST00000377612 COG2Q14746 738 aa21.38■■□□□ 1.01
COMMD6-202ENST00000377612 CCDC129Q6ZRS4 1044 aa21.38■■□□□ 1.01
COMMD6-202ENST00000377612 FBXO28Q9NVF7 368 aa21.38■■□□□ 1.01
COMMD6-202ENST00000377612 PLIN4Q96Q06 1357 aa21.37■■□□□ 1.01
COMMD6-202ENST00000377612 IGKV6D-41A0A0C4DH26 115 aa21.37■■□□□ 1.01
COMMD6-202ENST00000377612 WDR46O15213 610 aaKnown RBP21.37■■□□□ 1.01
COMMD6-202ENST00000377612 FLOT1O75955 427 aa21.37■■□□□ 1.01
COMMD6-202ENST00000377612 CCND3P30281 292 aaPredicted RBP21.37■■□□□ 1.01
COMMD6-202ENST00000377612 TDO2P48775 406 aa21.37■■□□□ 1.01
COMMD6-202ENST00000377612 CCNA1P78396 465 aa21.37■■□□□ 1.01
COMMD6-202ENST00000377612 ATP2B2Q01814 1243 aa21.37■■□□□ 1.01
COMMD6-202ENST00000377612 CACNB2Q08289 660 aaPredicted RBP21.37■■□□□ 1.01
COMMD6-202ENST00000377612 WDR78Q5VTH9 848 aa21.37■■□□□ 1.01
COMMD6-202ENST00000377612 IFNL3Q8IZI9 196 aa21.37■■□□□ 1.01
COMMD6-202ENST00000377612 NPLOC4Q8TAT6 608 aa21.37■■□□□ 1.01
COMMD6-202ENST00000377612 GCC1Q96CN9 775 aa21.37■■□□□ 1.01
COMMD6-202ENST00000377612 SH2D4AQ9H788 454 aa21.37■■□□□ 1.01
COMMD6-202ENST00000377612 HMX1Q9NP08 348 aaPredicted RBP21.37■■□□□ 1.01
COMMD6-202ENST00000377612 STAP2Q9UGK3 403 aa21.37■■□□□ 1.01
COMMD6-202ENST00000377612 LRRC37A2A6NM11 1700 aa21.36■■□□□ 1.01
COMMD6-202ENST00000377612 SLC15A5A6NIM6 579 aa21.36■■□□□ 1.01
COMMD6-202ENST00000377612 PRDM1O75626 825 aa21.36■■□□□ 1.01
COMMD6-202ENST00000377612 TFRCP02786 760 aaKnown RBP21.36■■□□□ 1.01
COMMD6-202ENST00000377612 GNAT2P19087 354 aa21.36■■□□□ 1.01
COMMD6-202ENST00000377612 PDE1AP54750 535 aa21.36■■□□□ 1.01
COMMD6-202ENST00000377612 CCAR1Q8IX12 1150 aaKnown RBP21.36■■□□□ 1.01
COMMD6-202ENST00000377612 SPATC1LQ9H0A9 340 aa21.36■■□□□ 1.01
COMMD6-202ENST00000377612 KANSL2Q9H9L4 492 aa21.36■■□□□ 1.01
COMMD6-202ENST00000377612 IGHA2P01877 340 aa21.35■■□□□ 1.01
COMMD6-202ENST00000377612 PAWRQ96IZ0 340 aaKnown RBP21.35■■□□□ 1.01
COMMD6-202ENST00000377612 LTBP2Q14767 1821 aa21.34■■□□□ 1.01
COMMD6-202ENST00000377612 PATL2C9JE40 543 aaKnown RBP21.34■■□□□ 1.01
COMMD6-202ENST00000377612 HOXC6P09630 235 aa21.34■■□□□ 1.01
COMMD6-202ENST00000377612 ERCC3P19447 782 aa21.34■■□□□ 1.01
COMMD6-202ENST00000377612 HABP4Q5JVS0 413 aaKnown RBP21.34■■□□□ 1.01
COMMD6-202ENST00000377612 FAM83BQ5T0W9 1011 aa21.34■■□□□ 1.01
COMMD6-202ENST00000377612 EXOC6Q8TAG9 804 aa21.34■■□□□ 1.01
COMMD6-202ENST00000377612 NUP88Q99567 741 aaPredicted RBP21.34■■□□□ 1.01
COMMD6-202ENST00000377612 LNPKQ9C0E8 428 aa21.34■■□□□ 1.01
COMMD6-202ENST00000377612 CWC22Q9HCG8 908 aaKnown RBP21.34■■□□□ 1.01
COMMD6-202ENST00000377612 OGDHLQ9ULD0 1010 aa21.34■■□□□ 1.01
COMMD6-202ENST00000377612 ADAMTS5Q9UNA0 930 aa21.34■■□□□ 1.01
COMMD6-202ENST00000377612 TACC3Q9Y6A5 838 aa21.34■■□□□ 1.01
COMMD6-202ENST00000377612 DNAH12Q6ZR08 3092 aa21.33■■□□□ 1.01
COMMD6-202ENST00000377612 APPP05067 770 aa21.33■■□□□ 1.01
COMMD6-202ENST00000377612 TMEM132BQ14DG7 1078 aa21.33■■□□□ 1.01
COMMD6-202ENST00000377612 VPS53Q5VIR6 699 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms