RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 CELF2O95319 508 aaKnown RBP9.58□□□□□ -0.88
CRNKL1-202ENST00000377340 STX17P56962 302 aa9.58□□□□□ -0.88
CRNKL1-202ENST00000377340 PDE4DQ08499 809 aa9.58□□□□□ -0.88
CRNKL1-202ENST00000377340 PPP2R5BQ15173 497 aa9.58□□□□□ -0.88
CRNKL1-202ENST00000377340 UTP14CQ5TAP6 766 aaKnown RBP9.58□□□□□ -0.88
CRNKL1-202ENST00000377340 TPH2Q8IWU9 490 aa9.58□□□□□ -0.88
CRNKL1-202ENST00000377340 SNX21Q969T3 373 aa9.58□□□□□ -0.88
CRNKL1-202ENST00000377340 TM6SF1Q9BZW5 370 aa9.58□□□□□ -0.88
CRNKL1-202ENST00000377340 LRWD1Q9UFC0 647 aa9.58□□□□□ -0.88
CRNKL1-202ENST00000377340 MAPK8IP1Q9UQF2 711 aa9.58□□□□□ -0.88
CRNKL1-202ENST00000377340 SMTNL1A8MU46 457 aa9.58□□□□□ -0.88
CRNKL1-202ENST00000377340 POTEB2H3BUK9 544 aa9.58□□□□□ -0.88
CRNKL1-202ENST00000377340 GAS7O60861 476 aa9.58□□□□□ -0.88
CRNKL1-202ENST00000377340 SCG2P13521 617 aa9.58□□□□□ -0.88
CRNKL1-202ENST00000377340 PDIA3P30101 505 aaKnown RBP9.58□□□□□ -0.88
CRNKL1-202ENST00000377340 UBE2HP62256 183 aa9.58□□□□□ -0.88
CRNKL1-202ENST00000377340 MAP3K9P80192 1104 aa9.58□□□□□ -0.88
CRNKL1-202ENST00000377340 Q3C1V9 767 aa9.58□□□□□ -0.88
CRNKL1-202ENST00000377340 FAM83BQ5T0W9 1011 aa9.58□□□□□ -0.88
CRNKL1-202ENST00000377340 CCDC183Q5T5S1 534 aa9.58□□□□□ -0.88
CRNKL1-202ENST00000377340 SEPT14Q6ZU15 432 aa9.58□□□□□ -0.88
CRNKL1-202ENST00000377340 KRT25Q7Z3Z0 450 aa9.58□□□□□ -0.88
CRNKL1-202ENST00000377340 BRAPQ7Z569 592 aa9.58□□□□□ -0.88
CRNKL1-202ENST00000377340 METTL13Q8N6R0 699 aa9.58□□□□□ -0.88
CRNKL1-202ENST00000377340 PRMT6Q96LA8 375 aaPredicted RBP9.58□□□□□ -0.88
CRNKL1-202ENST00000377340 DDX19AQ9NUU7 478 aaKnown RBP9.58□□□□□ -0.88
CRNKL1-202ENST00000377340 MED23Q9ULK4 1368 aa9.58□□□□□ -0.88
CRNKL1-202ENST00000377340 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.58□□□□□ -0.88
CRNKL1-202ENST00000377340 USP17L10C9JJH3 530 aa9.57□□□□□ -0.88
CRNKL1-202ENST00000377340 ERCC3P19447 782 aa9.57□□□□□ -0.88
CRNKL1-202ENST00000377340 GNPTABQ3T906 1256 aa9.57□□□□□ -0.88
CRNKL1-202ENST00000377340 SLC10A5Q5PT55 438 aa9.57□□□□□ -0.88
CRNKL1-202ENST00000377340 CDC42EP5Q6NZY7 148 aa9.57□□□□□ -0.88
CRNKL1-202ENST00000377340 SNX29Q8TEQ0 813 aa9.57□□□□□ -0.88
CRNKL1-202ENST00000377340 CEP95Q96GE4 821 aa9.57□□□□□ -0.88
CRNKL1-202ENST00000377340 GLT8D2Q9H1C3 349 aa9.57□□□□□ -0.88
CRNKL1-202ENST00000377340 SUGCTQ9HAC7 445 aa9.57□□□□□ -0.88
CRNKL1-202ENST00000377340 ABCC12Q96J65 1359 aa9.57□□□□□ -0.88
CRNKL1-202ENST00000377340 USP17L5A8MUK1 530 aa9.57□□□□□ -0.88
CRNKL1-202ENST00000377340 EEF2P13639 858 aaKnown RBP9.57□□□□□ -0.88
CRNKL1-202ENST00000377340 HOXA13P31271 388 aaPredicted RBP9.57□□□□□ -0.88
CRNKL1-202ENST00000377340 MRE11P49959 708 aa9.57□□□□□ -0.88
CRNKL1-202ENST00000377340 IGBP1P78318 339 aa9.57□□□□□ -0.88
CRNKL1-202ENST00000377340 ZSWIM6Q9HCJ5 1215 aa9.57□□□□□ -0.88
CRNKL1-202ENST00000377340 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.57□□□□□ -0.886e-6■■■■■ 48.1
CRNKL1-202ENST00000377340 ZNF70Q9UC06 446 aaPredicted RBP9.57□□□□□ -0.88
CRNKL1-202ENST00000377340 GSG1L2A8MUP6 293 aa9.57□□□□□ -0.88
CRNKL1-202ENST00000377340 UBE2Q2LH0YL09 131 aa9.57□□□□□ -0.88
CRNKL1-202ENST00000377340 VEGFAP15692 232 aaPredicted RBP9.57□□□□□ -0.88
CRNKL1-202ENST00000377340 ZNF165P49910 485 aa9.57□□□□□ -0.88
CRNKL1-202ENST00000377340 CALCRLQ16602 461 aa9.57□□□□□ -0.88
CRNKL1-202ENST00000377340 FKBP15Q5T1M5 1219 aa9.57□□□□□ -0.88
CRNKL1-202ENST00000377340 CDC37L1Q7L3B6 337 aa9.57□□□□□ -0.88
CRNKL1-202ENST00000377340 DPH6Q7L8W6 267 aa9.57□□□□□ -0.88
CRNKL1-202ENST00000377340 RNF169Q8NCN4 708 aa9.57□□□□□ -0.88
CRNKL1-202ENST00000377340 KCNQ5Q9NR82 932 aa9.57□□□□□ -0.88
CRNKL1-202ENST00000377340 PNPLA7Q6ZV29 1317 aa9.57□□□□□ -0.88
CRNKL1-202ENST00000377340 CYP4A11Q02928 519 aa9.57□□□□□ -0.88
CRNKL1-202ENST00000377340 FBXO33Q7Z6M2 555 aa9.57□□□□□ -0.88
CRNKL1-202ENST00000377340 BLIDQ8IZY5 108 aa9.57□□□□□ -0.88
CRNKL1-202ENST00000377340 GTF3C6Q969F1 213 aa9.57□□□□□ -0.88
CRNKL1-202ENST00000377340 INTS4Q96HW7 963 aaKnown RBP9.57□□□□□ -0.88
CRNKL1-202ENST00000377340 RRAGCQ9HB90 399 aa9.57□□□□□ -0.88
CRNKL1-202ENST00000377340 PDE4DIPQ5VU43 2346 aa9.56□□□□□ -0.88
CRNKL1-202ENST00000377340 ARHGEF35A5YM69 484 aa9.56□□□□□ -0.88
CRNKL1-202ENST00000377340 AKR1B1P15121 316 aa9.56□□□□□ -0.88
CRNKL1-202ENST00000377340 EIF2AK2P19525 551 aaKnown RBP9.56□□□□□ -0.88
CRNKL1-202ENST00000377340 RFX5P48382 616 aaPredicted RBP9.56□□□□□ -0.88
CRNKL1-202ENST00000377340 CETN1Q12798 172 aa9.56□□□□□ -0.88
CRNKL1-202ENST00000377340 NBPF9Q3BBW0 867 aa9.56□□□□□ -0.88
CRNKL1-202ENST00000377340 ANO1Q5XXA6 986 aa9.56□□□□□ -0.88
CRNKL1-202ENST00000377340 KANK3Q6NY19 840 aa9.56□□□□□ -0.88
CRNKL1-202ENST00000377340 DYMQ7RTS9 669 aa9.56□□□□□ -0.88
CRNKL1-202ENST00000377340 IQUBQ8NA54 791 aa9.56□□□□□ -0.88
CRNKL1-202ENST00000377340 TDRD7Q8NHU6 1098 aaKnown RBP9.56□□□□□ -0.88
CRNKL1-202ENST00000377340 ZNF274Q96GC6 653 aaPredicted RBP9.56□□□□□ -0.88
CRNKL1-202ENST00000377340 LRRC27Q9C0I9 530 aa9.56□□□□□ -0.88
CRNKL1-202ENST00000377340 TRPC6Q9Y210 931 aa9.56□□□□□ -0.88
CRNKL1-202ENST00000377340 MRVI1Q9Y6F6 885 aa9.56□□□□□ -0.88
CRNKL1-202ENST00000377340 F5H6K3 240 aa9.56□□□□□ -0.88
CRNKL1-202ENST00000377340 KLRC3Q07444 240 aa9.56□□□□□ -0.88
CRNKL1-202ENST00000377340 ARHGEF6Q15052 776 aa9.56□□□□□ -0.88
CRNKL1-202ENST00000377340 CTR9Q6PD62 1173 aa9.56□□□□□ -0.88
CRNKL1-202ENST00000377340 TBC1D10CQ8IV04 446 aa9.56□□□□□ -0.88
CRNKL1-202ENST00000377340 LLPHQ9BRT6 129 aaKnown RBP9.56□□□□□ -0.88
CRNKL1-202ENST00000377340 TBC1D7Q9P0N9 293 aa9.56□□□□□ -0.88
CRNKL1-202ENST00000377340 CD2APQ9Y5K6 639 aa9.56□□□□□ -0.88
CRNKL1-202ENST00000377340 PCP11498 1178 aaKnown RBP9.56□□□□□ -0.88
CRNKL1-202ENST00000377340 CCDC150Q8NCX0 1101 aa9.56□□□□□ -0.88
CRNKL1-202ENST00000377340 RAVER2Q9HCJ3 691 aaKnown RBP9.56□□□□□ -0.88
CRNKL1-202ENST00000377340 UTYO14607 1347 aa9.56□□□□□ -0.88
CRNKL1-202ENST00000377340 USP32Q8NFA0 1604 aa9.56□□□□□ -0.88
CRNKL1-202ENST00000377340 TRIM21P19474 475 aaKnown RBP9.55□□□□□ -0.88
CRNKL1-202ENST00000377340 HS2ST1Q7LGA3 356 aa9.55□□□□□ -0.88
CRNKL1-202ENST00000377340 PLA2G4DQ86XP0 818 aa9.55□□□□□ -0.88
CRNKL1-202ENST00000377340 MCF2L2Q86YR7 1114 aa9.55□□□□□ -0.88
CRNKL1-202ENST00000377340 AIFM3Q96NN9 605 aa9.55□□□□□ -0.88
CRNKL1-202ENST00000377340 TMEM47Q9BQJ4 181 aa9.55□□□□□ -0.88
CRNKL1-202ENST00000377340 SYT17Q9BSW7 474 aa9.55□□□□□ -0.88
CRNKL1-202ENST00000377340 CTAGE5O15320 804 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms